data_4PV6 # _model_server_result.job_id 4PWoafuPHR9rNAEoDswCSQ _model_server_result.datetime_utc '2025-04-18 09:12:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pv6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"X","auth_seq_id":200}' # _entry.id 4PV6 # _exptl.entry_id 4PV6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 809.571 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETYL COENZYME *A' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.94 _cell.angle_gamma 90 _cell.entry_id 4PV6 _cell.length_a 102.24 _cell.length_b 129.935 _cell.length_c 158.576 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PV6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 PISA monomeric 1 author_and_software_defined_assembly 7 PISA monomeric 1 author_and_software_defined_assembly 8 PISA monomeric 1 author_and_software_defined_assembly 9 PISA monomeric 1 author_and_software_defined_assembly 10 PISA monomeric 1 author_and_software_defined_assembly 11 PISA monomeric 1 author_and_software_defined_assembly 12 PISA monomeric 1 author_and_software_defined_assembly 13 PISA monomeric 1 author_and_software_defined_assembly 14 PISA monomeric 1 author_and_software_defined_assembly 15 PISA monomeric 1 author_and_software_defined_assembly 16 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,Q,Y 1 1 B,Z 2 1 C,R,AA 3 1 D,S,BA 4 1 E,CA 5 1 F,DA 6 1 G,T,EA 7 1 H,FA 8 1 I,U,GA 9 1 J,HA 10 1 K,V,IA 11 1 L,W,JA 12 1 M,KA 13 1 N,LA 14 1 O,X,MA 15 1 P,NA 16 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 Q N N ? 2 R N N ? 2 S N N ? 2 T N N ? 2 V N N ? 2 W N N ? 2 X N N # _chem_comp.formula 'C23 H38 N7 O17 P3 S' _chem_comp.formula_weight 809.571 _chem_comp.id ACO _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETYL COENZYME *A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A ACO sing 1 n y N1A C6A ACO doub 2 n y C2A N3A ACO doub 3 n y C2A H2A ACO sing 4 n n N3A C4A ACO sing 5 n y C4A C5A ACO doub 6 n y C4A N9A ACO sing 7 n y C5A C6A ACO sing 8 n y C5A N7A ACO sing 9 n y C6A N6A ACO sing 10 n n N6A H61A ACO sing 11 n n N6A H62A ACO sing 12 n n N7A C8A ACO doub 13 n y C8A N9A ACO sing 14 n y C8A H8A ACO sing 15 n n N9A C1B ACO sing 16 n n C1B C2B ACO sing 17 n n C1B O4B ACO sing 18 n n C1B H1B ACO sing 19 n n C2B O2B ACO sing 20 n n C2B C3B ACO sing 21 n n C2B H2B ACO sing 22 n n O2B HO2A ACO sing 23 n n C3B O3B ACO sing 24 n n C3B C4B ACO sing 25 n n C3B H3B ACO sing 26 n n O3B P3B ACO sing 27 n n P3B O7A ACO doub 28 n n P3B O8A ACO sing 29 n n P3B O9A ACO sing 30 n n O8A HOA8 ACO sing 31 n n O9A HOA9 ACO sing 32 n n C4B O4B ACO sing 33 n n C4B C5B ACO sing 34 n n C4B H4B ACO sing 35 n n C5B O5B ACO sing 36 n n C5B H51A ACO sing 37 n n C5B H52A ACO sing 38 n n O5B P1A ACO sing 39 n n P1A O1A ACO doub 40 n n P1A O2A ACO sing 41 n n P1A O3A ACO sing 42 n n O2A HOA2 ACO sing 43 n n O3A P2A ACO sing 44 n n P2A O4A ACO doub 45 n n P2A O5A ACO sing 46 n n P2A O6A ACO sing 47 n n O5A HOA5 ACO sing 48 n n O6A CCP ACO sing 49 n n CBP CCP ACO sing 50 n n CBP CDP ACO sing 51 n n CBP CEP ACO sing 52 n n CBP CAP ACO sing 53 n n CCP H121 ACO sing 54 n n CCP H122 ACO sing 55 n n CDP H131 ACO sing 56 n n CDP H132 ACO sing 57 n n CDP H133 ACO sing 58 n n CEP H141 ACO sing 59 n n CEP H142 ACO sing 60 n n CEP H143 ACO sing 61 n n CAP OAP ACO sing 62 n n CAP C9P ACO sing 63 n n CAP H10 ACO sing 64 n n OAP HO1 ACO sing 65 n n C9P O9P ACO doub 66 n n C9P N8P ACO sing 67 n n N8P C7P ACO sing 68 n n N8P HN8 ACO sing 69 n n C7P C6P ACO sing 70 n n C7P H71 ACO sing 71 n n C7P H72 ACO sing 72 n n C6P C5P ACO sing 73 n n C6P H61 ACO sing 74 n n C6P H62 ACO sing 75 n n C5P O5P ACO doub 76 n n C5P N4P ACO sing 77 n n N4P C3P ACO sing 78 n n N4P HN4 ACO sing 79 n n C3P C2P ACO sing 80 n n C3P H31 ACO sing 81 n n C3P H32 ACO sing 82 n n C2P S1P ACO sing 83 n n C2P H21 ACO sing 84 n n C2P H22 ACO sing 85 n n S1P C ACO sing 86 n n C O ACO doub 87 n n C CH3 ACO sing 88 n n CH3 HH31 ACO sing 89 n n CH3 HH32 ACO sing 90 n n CH3 HH33 ACO sing 91 n n # _atom_sites.entry_id 4PV6 _atom_sites.fract_transf_matrix[1][1] 0.009781 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000674 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007696 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006321 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 2 ACO C 1 200 200 ACO ACO . R 2 ACO G 1 200 200 ACO ACO . S 2 ACO I 1 200 200 ACO ACO . T 2 ACO F 1 200 200 ACO ACO . U 3 COA A 1 201 201 COA COA . V 2 ACO H 1 200 200 ACO ACO . W 2 ACO J 1 200 200 ACO ACO . X 2 ACO E 1 200 200 ACO ACO . Y 4 HOH C 1 301 301 HOH HOH . Y 4 HOH C 2 302 302 HOH HOH . Y 4 HOH C 3 303 303 HOH HOH . Y 4 HOH C 4 304 306 HOH HOH . Z 4 HOH D 1 201 202 HOH HOH . Z 4 HOH D 2 202 203 HOH HOH . Z 4 HOH D 3 203 204 HOH HOH . Z 4 HOH D 4 204 205 HOH HOH . Z 4 HOH D 5 205 208 HOH HOH . Z 4 HOH D 6 206 210 HOH HOH . Z 4 HOH D 7 207 212 HOH HOH . AA 4 HOH G 1 301 302 HOH HOH . BA 4 HOH I 1 301 301 HOH HOH . BA 4 HOH I 2 302 302 HOH HOH . BA 4 HOH I 3 303 303 HOH HOH . BA 4 HOH I 4 304 305 HOH HOH . CA 4 HOH K 1 201 202 HOH HOH . DA 4 HOH M 1 201 201 HOH HOH . DA 4 HOH M 2 202 202 HOH HOH . DA 4 HOH M 3 203 203 HOH HOH . DA 4 HOH M 4 204 205 HOH HOH . DA 4 HOH M 5 205 207 HOH HOH . EA 4 HOH F 1 301 301 HOH HOH . EA 4 HOH F 2 302 303 HOH HOH . EA 4 HOH F 3 303 304 HOH HOH . EA 4 HOH F 4 304 305 HOH HOH . FA 4 HOH N 1 201 201 HOH HOH . FA 4 HOH N 2 202 203 HOH HOH . GA 4 HOH A 1 301 301 HOH HOH . GA 4 HOH A 2 302 302 HOH HOH . GA 4 HOH A 3 303 303 HOH HOH . GA 4 HOH A 4 304 305 HOH HOH . GA 4 HOH A 5 305 306 HOH HOH . HA 4 HOH B 1 201 201 HOH HOH . IA 4 HOH H 1 301 301 HOH HOH . IA 4 HOH H 2 302 302 HOH HOH . JA 4 HOH J 1 301 301 HOH HOH . JA 4 HOH J 2 302 302 HOH HOH . JA 4 HOH J 3 303 303 HOH HOH . KA 4 HOH L 1 201 201 HOH HOH . KA 4 HOH L 2 202 203 HOH HOH . KA 4 HOH L 3 203 204 HOH HOH . KA 4 HOH L 4 204 205 HOH HOH . KA 4 HOH L 5 205 209 HOH HOH . LA 4 HOH O 1 201 201 HOH HOH . LA 4 HOH O 2 202 203 HOH HOH . LA 4 HOH O 3 203 204 HOH HOH . MA 4 HOH E 1 301 302 HOH HOH . MA 4 HOH E 2 302 304 HOH HOH . MA 4 HOH E 3 303 305 HOH HOH . NA 4 HOH P 1 201 201 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A ACO . . . X 2 110.112 -14.798 24.373 0.7 103.07 ? N1A ACO 200 E 1 HETATM 2 C C2A ACO . . . X 2 110.698 -15.037 25.562 0.7 109.65 ? C2A ACO 200 E 1 HETATM 3 N N3A ACO . . . X 2 110.261 -14.489 26.717 0.7 111.91 ? N3A ACO 200 E 1 HETATM 4 C C4A ACO . . . X 2 109.192 -13.653 26.766 0.7 107.17 ? C4A ACO 200 E 1 HETATM 5 C C5A ACO . . . X 2 108.511 -13.343 25.504 0.7 103.85 ? C5A ACO 200 E 1 HETATM 6 C C6A ACO . . . X 2 109.044 -13.984 24.28 0.7 104.46 ? C6A ACO 200 E 1 HETATM 7 N N6A ACO . . . X 2 108.472 -13.763 23.09 0.7 111.03 ? N6A ACO 200 E 1 HETATM 8 N N7A ACO . . . X 2 107.511 -12.503 25.807 0.7 102.16 ? N7A ACO 200 E 1 HETATM 9 C C8A ACO . . . X 2 107.54 -12.294 27.15 0.7 101.67 ? C8A ACO 200 E 1 HETATM 10 N N9A ACO . . . X 2 108.547 -12.983 27.732 0.7 106.4 ? N9A ACO 200 E 1 HETATM 11 C C1B ACO . . . X 2 108.91 -12.942 29.183 0.7 104.92 ? C1B ACO 200 E 1 HETATM 12 C C2B ACO . . . X 2 110.397 -12.563 29.349 0.7 99.53 ? C2B ACO 200 E 1 HETATM 13 O O2B ACO . . . X 2 111.071 -13.315 30.355 0.7 85.82 ? O2B ACO 200 E 1 HETATM 14 C C3B ACO . . . X 2 110.424 -11.073 29.661 0.7 104.31 ? C3B ACO 200 E 1 HETATM 15 O O3B ACO . . . X 2 111.198 -10.702 30.799 0.7 119.52 ? O3B ACO 200 E 1 HETATM 16 P P3B ACO . . . X 2 111.291 -9.176 31.356 0.7 137.76 ? P3B ACO 200 E 1 HETATM 17 O O7A ACO . . . X 2 110.642 -8.276 30.33 0.7 136.43 ? O7A ACO 200 E 1 HETATM 18 O O8A ACO . . . X 2 110.561 -9.23 32.679 0.7 133.5 ? O8A ACO 200 E 1 HETATM 19 O O9A ACO . . . X 2 112.773 -8.917 31.491 0.7 127.55 ? O9A ACO 200 E 1 HETATM 20 C C4B ACO . . . X 2 108.97 -10.673 29.865 0.7 106.98 ? C4B ACO 200 E 1 HETATM 21 O O4B ACO . . . X 2 108.178 -11.877 29.808 0.7 108.53 ? O4B ACO 200 E 1 HETATM 22 C C5B ACO . . . X 2 108.678 -9.647 28.769 0.7 104.58 ? C5B ACO 200 E 1 HETATM 23 O O5B ACO . . . X 2 107.447 -8.941 28.904 0.7 100.52 ? O5B ACO 200 E 1 HETATM 24 P P1A ACO . . . X 2 106.658 -8.617 27.547 0.7 94.12 ? P1A ACO 200 E 1 HETATM 25 O O1A ACO . . . X 2 105.378 -9.374 27.534 0.7 86.24 ? O1A ACO 200 E 1 HETATM 26 O O2A ACO . . . X 2 107.613 -8.76 26.385 0.7 104.77 ? O2A ACO 200 E 1 HETATM 27 O O3A ACO . . . X 2 106.226 -7.084 27.574 0.7 93.53 ? O3A ACO 200 E 1 HETATM 28 P P2A ACO . . . X 2 105.58 -6.595 26.187 0.7 89.96 ? P2A ACO 200 E 1 HETATM 29 O O4A ACO . . . X 2 106.25 -5.318 25.757 0.7 94.76 ? O4A ACO 200 E 1 HETATM 30 O O5A ACO . . . X 2 104.095 -6.606 26.366 0.7 86.36 ? O5A ACO 200 E 1 HETATM 31 O O6A ACO . . . X 2 105.976 -7.781 25.172 0.7 83.86 ? O6A ACO 200 E 1 HETATM 32 C CBP ACO . . . X 2 104.562 -8.148 23.293 0.7 94.25 ? CBP ACO 200 E 1 HETATM 33 C CCP ACO . . . X 2 105.023 -8.698 24.631 0.7 91.56 ? CCP ACO 200 E 1 HETATM 34 C CDP ACO . . . X 2 105.828 -7.756 22.541 0.7 95.89 ? CDP ACO 200 E 1 HETATM 35 C CEP ACO . . . X 2 103.738 -6.895 23.543 0.7 95.76 ? CEP ACO 200 E 1 HETATM 36 C CAP ACO . . . X 2 103.739 -9.158 22.443 0.7 84.14 ? CAP ACO 200 E 1 HETATM 37 O OAP ACO . . . X 2 102.36 -9.295 22.813 0.7 70.1 ? OAP ACO 200 E 1 HETATM 38 C C9P ACO . . . X 2 103.753 -8.706 21.012 0.7 82.77 ? C9P ACO 200 E 1 HETATM 39 O O9P ACO . . . X 2 103.074 -7.748 20.634 0.7 73.64 ? O9P ACO 200 E 1 HETATM 40 N N8P ACO . . . X 2 104.582 -9.372 20.217 0.7 90.51 ? N8P ACO 200 E 1 HETATM 41 C C7P ACO . . . X 2 104.793 -8.969 18.833 0.7 102.52 ? C7P ACO 200 E 1 HETATM 42 C C6P ACO . . . X 2 103.812 -9.561 17.81 0.7 99.34 ? C6P ACO 200 E 1 HETATM 43 C C5P ACO . . . X 2 102.376 -9.178 18.115 0.7 94.85 ? C5P ACO 200 E 1 HETATM 44 O O5P ACO . . . X 2 102.098 -8.022 18.424 0.7 88.92 ? O5P ACO 200 E 1 HETATM 45 N N4P ACO . . . X 2 101.496 -10.184 18.069 0.7 86.83 ? N4P ACO 200 E 1 HETATM 46 C C3P ACO . . . X 2 100.124 -10.044 18.491 0.7 86.69 ? C3P ACO 200 E 1 HETATM 47 C C2P ACO . . . X 2 99.33 -11.344 18.385 0.7 85.72 ? C2P ACO 200 E 1 HETATM 48 S S1P ACO . . . X 2 97.639 -10.963 18.016 0.7 91.87 ? S1P ACO 200 E 1 HETATM 49 C C ACO . . . X 2 96.735 -12.175 18.706 0.7 82.14 ? C ACO 200 E 1 HETATM 50 O O ACO . . . X 2 95.524 -12.034 18.775 0.7 80.16 ? O ACO 200 E 1 HETATM 51 C CH3 ACO . . . X 2 97.409 -13.396 19.229 0.7 77.37 ? CH3 ACO 200 E 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 51 #