data_4PV6 # _model_server_result.job_id yDZLbGz-vyIgkzveHRJRHA _model_server_result.datetime_utc '2025-04-19 07:11:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pv6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":201}' # _entry.id 4PV6 # _exptl.entry_id 4PV6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.94 _cell.angle_gamma 90 _cell.entry_id 4PV6 _cell.length_a 102.24 _cell.length_b 129.935 _cell.length_c 158.576 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PV6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 PISA monomeric 1 author_and_software_defined_assembly 7 PISA monomeric 1 author_and_software_defined_assembly 8 PISA monomeric 1 author_and_software_defined_assembly 9 PISA monomeric 1 author_and_software_defined_assembly 10 PISA monomeric 1 author_and_software_defined_assembly 11 PISA monomeric 1 author_and_software_defined_assembly 12 PISA monomeric 1 author_and_software_defined_assembly 13 PISA monomeric 1 author_and_software_defined_assembly 14 PISA monomeric 1 author_and_software_defined_assembly 15 PISA monomeric 1 author_and_software_defined_assembly 16 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,Q,Y 1 1 B,Z 2 1 C,R,AA 3 1 D,S,BA 4 1 E,CA 5 1 F,DA 6 1 G,T,EA 7 1 H,FA 8 1 I,U,GA 9 1 J,HA 10 1 K,V,IA 11 1 L,W,JA 12 1 M,KA 13 1 N,LA 14 1 O,X,MA 15 1 P,NA 16 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id U _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 161 n y N1A C6A COA doub 162 n y C2A N3A COA doub 163 n y C2A H2A COA sing 164 n n N3A C4A COA sing 165 n y C4A C5A COA doub 166 n y C4A N9A COA sing 167 n y C5A C6A COA sing 168 n y C5A N7A COA sing 169 n y C6A N6A COA sing 170 n n N6A H61A COA sing 171 n n N6A H62A COA sing 172 n n N7A C8A COA doub 173 n y C8A N9A COA sing 174 n y C8A H8A COA sing 175 n n N9A C1B COA sing 176 n n C1B C2B COA sing 177 n n C1B O4B COA sing 178 n n C1B H1B COA sing 179 n n C2B O2B COA sing 180 n n C2B C3B COA sing 181 n n C2B H2B COA sing 182 n n O2B HO2A COA sing 183 n n C3B O3B COA sing 184 n n C3B C4B COA sing 185 n n C3B H3B COA sing 186 n n O3B P3B COA sing 187 n n P3B O7A COA doub 188 n n P3B O8A COA sing 189 n n P3B O9A COA sing 190 n n O8A HOA8 COA sing 191 n n O9A HOA9 COA sing 192 n n C4B O4B COA sing 193 n n C4B C5B COA sing 194 n n C4B H4B COA sing 195 n n C5B O5B COA sing 196 n n C5B H51A COA sing 197 n n C5B H52A COA sing 198 n n O5B P1A COA sing 199 n n P1A O1A COA doub 200 n n P1A O2A COA sing 201 n n P1A O3A COA sing 202 n n O2A HOA2 COA sing 203 n n O3A P2A COA sing 204 n n P2A O4A COA doub 205 n n P2A O5A COA sing 206 n n P2A O6A COA sing 207 n n O5A HOA5 COA sing 208 n n O6A CCP COA sing 209 n n CBP CCP COA sing 210 n n CBP CDP COA sing 211 n n CBP CEP COA sing 212 n n CBP CAP COA sing 213 n n CCP H121 COA sing 214 n n CCP H122 COA sing 215 n n CDP H131 COA sing 216 n n CDP H132 COA sing 217 n n CDP H133 COA sing 218 n n CEP H141 COA sing 219 n n CEP H142 COA sing 220 n n CEP H143 COA sing 221 n n CAP OAP COA sing 222 n n CAP C9P COA sing 223 n n CAP H10 COA sing 224 n n OAP HO1 COA sing 225 n n C9P O9P COA doub 226 n n C9P N8P COA sing 227 n n N8P C7P COA sing 228 n n N8P HN8 COA sing 229 n n C7P C6P COA sing 230 n n C7P H71 COA sing 231 n n C7P H72 COA sing 232 n n C6P C5P COA sing 233 n n C6P H61 COA sing 234 n n C6P H62 COA sing 235 n n C5P O5P COA doub 236 n n C5P N4P COA sing 237 n n N4P C3P COA sing 238 n n N4P HN4 COA sing 239 n n C3P C2P COA sing 240 n n C3P H31 COA sing 241 n n C3P H32 COA sing 242 n n C2P S1P COA sing 243 n n C2P H21 COA sing 244 n n C2P H22 COA sing 245 n n S1P HS1 COA sing 246 n n # _atom_sites.entry_id 4PV6 _atom_sites.fract_transf_matrix[1][1] 0.009781 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000674 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007696 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006321 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 2 ACO C 1 200 200 ACO ACO . R 2 ACO G 1 200 200 ACO ACO . S 2 ACO I 1 200 200 ACO ACO . T 2 ACO F 1 200 200 ACO ACO . U 3 COA A 1 201 201 COA COA . V 2 ACO H 1 200 200 ACO ACO . W 2 ACO J 1 200 200 ACO ACO . X 2 ACO E 1 200 200 ACO ACO . Y 4 HOH C 1 301 301 HOH HOH . Y 4 HOH C 2 302 302 HOH HOH . Y 4 HOH C 3 303 303 HOH HOH . Y 4 HOH C 4 304 306 HOH HOH . Z 4 HOH D 1 201 202 HOH HOH . Z 4 HOH D 2 202 203 HOH HOH . Z 4 HOH D 3 203 204 HOH HOH . Z 4 HOH D 4 204 205 HOH HOH . Z 4 HOH D 5 205 208 HOH HOH . Z 4 HOH D 6 206 210 HOH HOH . Z 4 HOH D 7 207 212 HOH HOH . AA 4 HOH G 1 301 302 HOH HOH . BA 4 HOH I 1 301 301 HOH HOH . BA 4 HOH I 2 302 302 HOH HOH . BA 4 HOH I 3 303 303 HOH HOH . BA 4 HOH I 4 304 305 HOH HOH . CA 4 HOH K 1 201 202 HOH HOH . DA 4 HOH M 1 201 201 HOH HOH . DA 4 HOH M 2 202 202 HOH HOH . DA 4 HOH M 3 203 203 HOH HOH . DA 4 HOH M 4 204 205 HOH HOH . DA 4 HOH M 5 205 207 HOH HOH . EA 4 HOH F 1 301 301 HOH HOH . EA 4 HOH F 2 302 303 HOH HOH . EA 4 HOH F 3 303 304 HOH HOH . EA 4 HOH F 4 304 305 HOH HOH . FA 4 HOH N 1 201 201 HOH HOH . FA 4 HOH N 2 202 203 HOH HOH . GA 4 HOH A 1 301 301 HOH HOH . GA 4 HOH A 2 302 302 HOH HOH . GA 4 HOH A 3 303 303 HOH HOH . GA 4 HOH A 4 304 305 HOH HOH . GA 4 HOH A 5 305 306 HOH HOH . HA 4 HOH B 1 201 201 HOH HOH . IA 4 HOH H 1 301 301 HOH HOH . IA 4 HOH H 2 302 302 HOH HOH . JA 4 HOH J 1 301 301 HOH HOH . JA 4 HOH J 2 302 302 HOH HOH . JA 4 HOH J 3 303 303 HOH HOH . KA 4 HOH L 1 201 201 HOH HOH . KA 4 HOH L 2 202 203 HOH HOH . KA 4 HOH L 3 203 204 HOH HOH . KA 4 HOH L 4 204 205 HOH HOH . KA 4 HOH L 5 205 209 HOH HOH . LA 4 HOH O 1 201 201 HOH HOH . LA 4 HOH O 2 202 203 HOH HOH . LA 4 HOH O 3 203 204 HOH HOH . MA 4 HOH E 1 301 302 HOH HOH . MA 4 HOH E 2 302 304 HOH HOH . MA 4 HOH E 3 303 305 HOH HOH . NA 4 HOH P 1 201 201 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . U 3 45.878 -0.941 86.666 0.7 108.22 ? N1A COA 201 A 1 HETATM 2 C C2A COA . . . U 3 47.031 -1.604 86.489 0.7 101.76 ? C2A COA 201 A 1 HETATM 3 N N3A COA . . . U 3 47.044 -2.86 86.02 0.7 105.64 ? N3A COA 201 A 1 HETATM 4 C C4A COA . . . U 3 45.901 -3.525 85.684 0.7 100.73 ? C4A COA 201 A 1 HETATM 5 C C5A COA . . . U 3 44.613 -2.853 85.854 0.7 99.51 ? C5A COA 201 A 1 HETATM 6 C C6A COA . . . U 3 44.666 -1.479 86.382 0.7 103.25 ? C6A COA 201 A 1 HETATM 7 N N6A COA . . . U 3 43.519 -0.791 86.565 0.7 106.07 ? N6A COA 201 A 1 HETATM 8 N N7A COA . . . U 3 43.655 -3.706 85.46 0.7 93.14 ? N7A COA 201 A 1 HETATM 9 C C8A COA . . . U 3 44.271 -4.842 85.071 0.7 93.65 ? C8A COA 201 A 1 HETATM 10 N N9A COA . . . U 3 45.613 -4.746 85.212 0.7 94.73 ? N9A COA 201 A 1 HETATM 11 C C1B COA . . . U 3 46.642 -5.779 84.857 0.7 78.31 ? C1B COA 201 A 1 HETATM 12 C C2B COA . . . U 3 46.889 -6.903 85.797 0.7 65.68 ? C2B COA 201 A 1 HETATM 13 O O2B COA . . . U 3 48.085 -7.493 85.365 0.7 55.35 ? O2B COA 201 A 1 HETATM 14 C C3B COA . . . U 3 45.902 -7.941 85.46 0.7 68.43 ? C3B COA 201 A 1 HETATM 15 O O3B COA . . . U 3 46.464 -9.189 85.562 0.7 72.66 ? O3B COA 201 A 1 HETATM 16 P P3B COA . . . U 3 45.458 -10.422 85.422 0.7 83.2 ? P3B COA 201 A 1 HETATM 17 O O7A COA . . . U 3 45.494 -10.833 83.983 0.7 77.25 ? O7A COA 201 A 1 HETATM 18 O O8A COA . . . U 3 44.106 -9.897 85.854 0.7 67.52 ? O8A COA 201 A 1 HETATM 19 O O9A COA . . . U 3 46.17 -11.408 86.329 0.7 96.87 ? O9A COA 201 A 1 HETATM 20 C C4B COA . . . U 3 45.768 -7.87 83.984 0.7 84.58 ? C4B COA 201 A 1 HETATM 21 O O4B COA . . . U 3 46.238 -6.531 83.723 0.7 88.6 ? O4B COA 201 A 1 HETATM 22 C C5B COA . . . U 3 44.352 -8.238 83.43 0.7 99.1 ? C5B COA 201 A 1 HETATM 23 O O5B COA . . . U 3 43.681 -9.404 83.939 0.7 96.34 ? O5B COA 201 A 1 HETATM 24 P P1A COA . . . U 3 42.594 -10.226 83.06 0.7 100.05 ? P1A COA 201 A 1 HETATM 25 O O1A COA . . . U 3 43.3 -10.907 81.919 0.7 95.82 ? O1A COA 201 A 1 HETATM 26 O O2A COA . . . U 3 41.37 -9.404 82.742 0.7 100.69 ? O2A COA 201 A 1 HETATM 27 O O3A COA . . . U 3 42.149 -11.344 84.117 0.7 106.69 ? O3A COA 201 A 1 HETATM 28 P P2A COA . . . U 3 41.202 -12.538 83.618 0.7 112.12 ? P2A COA 201 A 1 HETATM 29 O O4A COA . . . U 3 40.89 -12.226 82.179 0.7 124.9 ? O4A COA 201 A 1 HETATM 30 O O5A COA . . . U 3 41.767 -13.894 83.932 0.7 110.51 ? O5A COA 201 A 1 HETATM 31 O O6A COA . . . U 3 39.92 -12.381 84.556 0.7 100.5 ? O6A COA 201 A 1 HETATM 32 C CBP COA . . . U 3 37.635 -12.244 83.715 0.7 114.32 ? CBP COA 201 A 1 HETATM 33 C CCP COA . . . U 3 38.876 -11.494 84.213 0.7 106.25 ? CCP COA 201 A 1 HETATM 34 C CDP COA . . . U 3 36.546 -11.283 83.293 0.7 114.92 ? CDP COA 201 A 1 HETATM 35 C CEP COA . . . U 3 37.394 -13.779 83.814 0.7 124.62 ? CEP COA 201 A 1 HETATM 36 C CAP COA . . . U 3 38.287 -12.522 82.276 0.7 104.15 ? CAP COA 201 A 1 HETATM 37 O OAP COA . . . U 3 38.978 -13.792 82.181 0.7 95.15 ? OAP COA 201 A 1 HETATM 38 C C9P COA . . . U 3 37.499 -12.481 80.975 0.7 88.42 ? C9P COA 201 A 1 HETATM 39 O O9P COA . . . U 3 36.295 -12.682 80.912 0.7 86.7 ? O9P COA 201 A 1 HETATM 40 N N8P COA . . . U 3 38.223 -12.162 79.894 0.7 77.31 ? N8P COA 201 A 1 HETATM 41 C C7P COA . . . U 3 37.572 -11.79 78.653 0.7 77.3 ? C7P COA 201 A 1 HETATM 42 C C6P COA . . . U 3 36.869 -12.928 77.924 0.7 74.44 ? C6P COA 201 A 1 HETATM 43 C C5P COA . . . U 3 37.901 -13.539 77.048 0.7 69.94 ? C5P COA 201 A 1 HETATM 44 O O5P COA . . . U 3 39.059 -13.419 77.393 0.7 82.76 ? O5P COA 201 A 1 HETATM 45 N N4P COA . . . U 3 37.495 -14.122 75.933 0.7 61.62 ? N4P COA 201 A 1 HETATM 46 C C3P COA . . . U 3 38.444 -14.572 74.935 0.7 59.33 ? C3P COA 201 A 1 HETATM 47 C C2P COA . . . U 3 38.703 -13.486 73.895 0.7 59.04 ? C2P COA 201 A 1 HETATM 48 S S1P COA . . . U 3 38.529 -11.83 74.632 0.7 59.22 ? S1P COA 201 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 374 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 48 #