data_4PWU # _model_server_result.job_id YBQQJ2qU2XJ9iSY8vEzJ7g _model_server_result.datetime_utc '2024-11-22 17:33:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pwu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":202}' # _entry.id 4PWU # _exptl.entry_id 4PWU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.26 _cell.angle_gamma 90 _cell.entry_id 4PWU _cell.length_a 61.77 _cell.length_b 74.38 _cell.length_c 74.2 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PWU _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 PISA tetrameric 4 software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,H,I 1 1 C,D,F,G,J,K 2 1 A,B,E,H,I 3 1,2 C,D,F,G,J,K 4 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_654 -x+1,y,-z-1 -1 0 0 0 1 0 0 0 -1 73.70988 0 -73.233048 3 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLY 19 A GLY 49 1_555 A N MSE 20 A MSE 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.348 ? covale ? covale2 A C MSE 20 A MSE 50 1_555 A N PRO 21 A PRO 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.355 ? covale ? covale3 B C GLY 19 B GLY 49 1_555 B N MSE 20 B MSE 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale4 B C MSE 20 B MSE 50 1_555 B N PRO 21 B PRO 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.366 ? covale ? covale5 C C GLY 19 C GLY 49 1_555 C N MSE 20 C MSE 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale6 C C MSE 20 C MSE 50 1_555 C N PRO 21 C PRO 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.368 ? covale ? covale7 D C GLY 19 D GLY 49 1_555 D N MSE 20 D MSE 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale8 D C MSE 20 D MSE 50 1_555 D N PRO 21 D PRO 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.38 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 4PWU _atom_sites.fract_transf_matrix[1][1] 0.016189 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002639 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013444 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL A 1 201 151 GOL GOL . F 2 GOL D 1 201 152 GOL GOL . G 2 GOL D 1 202 153 GOL GOL . H 3 HOH A 1 301 164 HOH HOH . H 3 HOH A 2 302 165 HOH HOH . I 3 HOH B 1 201 157 HOH HOH . I 3 HOH B 2 202 161 HOH HOH . I 3 HOH B 3 203 162 HOH HOH . I 3 HOH B 4 204 170 HOH HOH . J 3 HOH C 1 201 156 HOH HOH . J 3 HOH C 2 202 158 HOH HOH . J 3 HOH C 3 203 160 HOH HOH . J 3 HOH C 4 204 163 HOH HOH . J 3 HOH C 5 205 167 HOH HOH . J 3 HOH C 6 206 169 HOH HOH . K 3 HOH D 1 301 154 HOH HOH . K 3 HOH D 2 302 155 HOH HOH . K 3 HOH D 3 303 159 HOH HOH . K 3 HOH D 4 304 166 HOH HOH . K 3 HOH D 5 305 168 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 2 10.566 -22.924 8.323 1 85.69 ? C1 GOL 202 D 1 HETATM 2 O O1 GOL . . . G 2 9.383 -23.246 7.604 1 84.84 ? O1 GOL 202 D 1 HETATM 3 C C2 GOL . . . G 2 11.266 -24.179 8.795 1 88.03 ? C2 GOL 202 D 1 HETATM 4 O O2 GOL . . . G 2 10.462 -24.845 9.776 1 90.31 ? O2 GOL 202 D 1 HETATM 5 C C3 GOL . . . G 2 12.637 -23.884 9.362 1 89.75 ? C3 GOL 202 D 1 HETATM 6 O O3 GOL . . . G 2 12.595 -22.911 10.401 1 91.63 ? O3 GOL 202 D 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #