data_4PX3
#
_model_server_result.job_id            O8zLSJxdFsfcovES-64DQA 
_model_server_result.datetime_utc      '2024-11-08 14:50:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4px3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":711}' 
#
_entry.id    4PX3 
#
_exptl.entry_id    4PX3 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    27 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            4PX3 
_cell.length_a            148.873 
_cell.length_b            148.873 
_cell.length_c            132.326 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PX3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,NA 1 1 
B,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,OA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
? 4 P N N 
? 4 Q N N 
? 4 T N N 
? 4 U N N 
? 4 V N N 
? 4 W N N 
? 4 X N N 
? 4 Y N N 
? 4 Z N N 
? 4 AA N N 
? 4 BA N N 
? 4 CA N N 
? 4 DA N N 
? 4 EA N N 
? 4 FA N N 
? 4 GA N N 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4PX3 
_atom_sites.fract_transf_matrix[1][1]    0.006717 
_atom_sites.fract_transf_matrix[1][2]    0.003878 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007756 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007557 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 2WX A 1 701 1 2WX UNL . 
D 3 S6P A 1 702 1 S6P S6P . 
E 4 IOD A 1 703 5 IOD IOD . 
F 4 IOD A 1 704 6 IOD IOD . 
G 4 IOD A 1 705 7 IOD IOD . 
H 4 IOD A 1 706 9 IOD IOD . 
I 4 IOD A 1 707 10 IOD IOD . 
J 4 IOD A 1 708 12 IOD IOD . 
K 4 IOD A 1 709 14 IOD IOD . 
L 4 IOD A 1 710 17 IOD IOD . 
M 4 IOD A 1 711 19 IOD IOD . 
N 4 IOD A 1 712 20 IOD IOD . 
O 4 IOD A 1 713 21 IOD IOD . 
P 4 IOD A 1 714 25 IOD IOD . 
Q 4 IOD A 1 715 28 IOD IOD . 
R 2 2WX B 1 701 1 2WX UNL . 
S 3 S6P B 1 702 1 S6P S6P . 
T 4 IOD B 1 703 1 IOD IOD . 
U 4 IOD B 1 704 2 IOD IOD . 
V 4 IOD B 1 705 3 IOD IOD . 
W 4 IOD B 1 706 4 IOD IOD . 
X 4 IOD B 1 707 8 IOD IOD . 
Y 4 IOD B 1 708 11 IOD IOD . 
Z 4 IOD B 1 709 13 IOD IOD . 
AA 4 IOD B 1 710 15 IOD IOD . 
BA 4 IOD B 1 711 16 IOD IOD . 
CA 4 IOD B 1 712 18 IOD IOD . 
DA 4 IOD B 1 713 22 IOD IOD . 
EA 4 IOD B 1 714 23 IOD IOD . 
FA 4 IOD B 1 715 26 IOD IOD . 
GA 4 IOD B 1 716 27 IOD IOD . 
HA 5 GOL B 1 717 1 GOL GOL . 
IA 6 SO4 B 1 718 1 SO4 SO4 . 
JA 6 SO4 B 1 719 3 SO4 SO4 . 
KA 6 SO4 B 1 720 4 SO4 SO4 . 
LA 6 SO4 B 1 721 5 SO4 SO4 . 
MA 6 SO4 B 1 722 6 SO4 SO4 . 
NA 7 HOH A 1 801 4 HOH HOH . 
NA 7 HOH A 2 802 7 HOH HOH . 
NA 7 HOH A 3 803 9 HOH HOH . 
NA 7 HOH A 4 804 12 HOH HOH . 
NA 7 HOH A 5 805 13 HOH HOH . 
NA 7 HOH A 6 806 15 HOH HOH . 
NA 7 HOH A 7 807 17 HOH HOH . 
NA 7 HOH A 8 808 19 HOH HOH . 
NA 7 HOH A 9 809 24 HOH HOH . 
NA 7 HOH A 10 810 33 HOH HOH . 
NA 7 HOH A 11 811 34 HOH HOH . 
NA 7 HOH A 12 812 35 HOH HOH . 
NA 7 HOH A 13 813 47 HOH HOH . 
NA 7 HOH A 14 814 48 HOH HOH . 
NA 7 HOH A 15 815 49 HOH HOH . 
NA 7 HOH A 16 816 53 HOH HOH . 
NA 7 HOH A 17 817 55 HOH HOH . 
NA 7 HOH A 18 818 56 HOH HOH . 
NA 7 HOH A 19 819 57 HOH HOH . 
NA 7 HOH A 20 820 60 HOH HOH . 
NA 7 HOH A 21 821 71 HOH HOH . 
NA 7 HOH A 22 822 72 HOH HOH . 
NA 7 HOH A 23 823 73 HOH HOH . 
NA 7 HOH A 24 824 74 HOH HOH . 
NA 7 HOH A 25 825 75 HOH HOH . 
NA 7 HOH A 26 826 77 HOH HOH . 
NA 7 HOH A 27 827 79 HOH HOH . 
NA 7 HOH A 28 828 82 HOH HOH . 
NA 7 HOH A 29 829 83 HOH HOH . 
NA 7 HOH A 30 830 84 HOH HOH . 
NA 7 HOH A 31 831 85 HOH HOH . 
NA 7 HOH A 32 832 93 HOH HOH . 
NA 7 HOH A 33 833 95 HOH HOH . 
NA 7 HOH A 34 834 102 HOH HOH . 
NA 7 HOH A 35 835 103 HOH HOH . 
NA 7 HOH A 36 836 104 HOH HOH . 
NA 7 HOH A 37 837 105 HOH HOH . 
OA 7 HOH B 1 801 1 HOH HOH . 
OA 7 HOH B 2 802 2 HOH HOH . 
OA 7 HOH B 3 803 3 HOH HOH . 
OA 7 HOH B 4 804 5 HOH HOH . 
OA 7 HOH B 5 805 8 HOH HOH . 
OA 7 HOH B 6 806 10 HOH HOH . 
OA 7 HOH B 7 807 11 HOH HOH . 
OA 7 HOH B 8 808 14 HOH HOH . 
OA 7 HOH B 9 809 16 HOH HOH . 
OA 7 HOH B 10 810 20 HOH HOH . 
OA 7 HOH B 11 811 21 HOH HOH . 
OA 7 HOH B 12 812 22 HOH HOH . 
OA 7 HOH B 13 813 23 HOH HOH . 
OA 7 HOH B 14 814 25 HOH HOH . 
OA 7 HOH B 15 815 26 HOH HOH . 
OA 7 HOH B 16 816 27 HOH HOH . 
OA 7 HOH B 17 817 28 HOH HOH . 
OA 7 HOH B 18 818 29 HOH HOH . 
OA 7 HOH B 19 819 30 HOH HOH . 
OA 7 HOH B 20 820 31 HOH HOH . 
OA 7 HOH B 21 821 32 HOH HOH . 
OA 7 HOH B 22 822 36 HOH HOH . 
OA 7 HOH B 23 823 37 HOH HOH . 
OA 7 HOH B 24 824 38 HOH HOH . 
OA 7 HOH B 25 825 39 HOH HOH . 
OA 7 HOH B 26 826 40 HOH HOH . 
OA 7 HOH B 27 827 41 HOH HOH . 
OA 7 HOH B 28 828 42 HOH HOH . 
OA 7 HOH B 29 829 43 HOH HOH . 
OA 7 HOH B 30 830 44 HOH HOH . 
OA 7 HOH B 31 831 45 HOH HOH . 
OA 7 HOH B 32 832 46 HOH HOH . 
OA 7 HOH B 33 833 50 HOH HOH . 
OA 7 HOH B 34 834 51 HOH HOH . 
OA 7 HOH B 35 835 54 HOH HOH . 
OA 7 HOH B 36 836 58 HOH HOH . 
OA 7 HOH B 37 837 59 HOH HOH . 
OA 7 HOH B 38 838 61 HOH HOH . 
OA 7 HOH B 39 839 64 HOH HOH . 
OA 7 HOH B 40 840 65 HOH HOH . 
OA 7 HOH B 41 841 66 HOH HOH . 
OA 7 HOH B 42 842 67 HOH HOH . 
OA 7 HOH B 43 843 68 HOH HOH . 
OA 7 HOH B 44 844 69 HOH HOH . 
OA 7 HOH B 45 845 70 HOH HOH . 
OA 7 HOH B 46 846 76 HOH HOH . 
OA 7 HOH B 47 847 78 HOH HOH . 
OA 7 HOH B 48 848 80 HOH HOH . 
OA 7 HOH B 49 849 81 HOH HOH . 
OA 7 HOH B 50 850 86 HOH HOH . 
OA 7 HOH B 51 851 87 HOH HOH . 
OA 7 HOH B 52 852 89 HOH HOH . 
OA 7 HOH B 53 853 90 HOH HOH . 
OA 7 HOH B 54 854 92 HOH HOH . 
OA 7 HOH B 55 855 94 HOH HOH . 
OA 7 HOH B 56 856 98 HOH HOH . 
OA 7 HOH B 57 857 99 HOH HOH . 
OA 7 HOH B 58 858 101 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         M 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               33.042 
_atom_site.Cartn_y               -25.624 
_atom_site.Cartn_z               -3.646 
_atom_site.occupancy             0.3 
_atom_site.B_iso_or_equiv        88.73 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           711 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#