data_4PXG # _model_server_result.job_id 9e36pQJVkLq0YQoqU3NDNA _model_server_result.datetime_utc '2024-12-05 19:00:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pxg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 4PXG # _exptl.entry_id 4PXG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PXG _cell.length_a 69.648 _cell.length_b 197.673 _cell.length_c 191.145 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PXG _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 156 A GLU 136 1_555 A N MSE 157 A MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale2 A C MSE 157 A MSE 137 1_555 A N HIS 158 A HIS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale3 A C TYR 227 A TYR 207 1_555 A N MSE 228 A MSE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale4 A C MSE 228 A MSE 208 1_555 A N THR 229 A THR 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 A C SER 337 A SER 317 1_555 A N MSE 338 A MSE 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MSE 338 A MSE 318 1_555 A N SER 339 A SER 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale7 A C SER 395 A SER 375 1_555 A N MSE 396 A MSE 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale8 A C MSE 396 A MSE 376 1_555 A N PRO 397 A PRO 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale9 A C ARG 407 A ARG 387 1_555 A N MSE 408 A MSE 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale10 A C MSE 408 A MSE 388 1_555 A N TRP 409 A TRP 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale11 A C TRP 488 A TRP 468 1_555 A N MSE 489 A MSE 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale12 A C MSE 489 A MSE 469 1_555 A N THR 490 A THR 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.303 ? covale ? covale13 B C GLU 156 B GLU 136 1_555 B N MSE 157 B MSE 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale14 B C MSE 157 B MSE 137 1_555 B N HIS 158 B HIS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale15 B C TYR 227 B TYR 207 1_555 B N MSE 228 B MSE 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale16 B C MSE 228 B MSE 208 1_555 B N THR 229 B THR 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale17 B C SER 337 B SER 317 1_555 B N MSE 338 B MSE 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale18 B C MSE 338 B MSE 318 1_555 B N SER 339 B SER 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale19 B C SER 395 B SER 375 1_555 B N MSE 396 B MSE 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale20 B C MSE 396 B MSE 376 1_555 B N PRO 397 B PRO 377 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale21 B C ARG 407 B ARG 387 1_555 B N MSE 408 B MSE 388 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale22 B C MSE 408 B MSE 388 1_555 B N TRP 409 B TRP 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.307 ? covale ? covale23 B C TRP 488 B TRP 468 1_555 B N MSE 489 B MSE 469 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale24 B C MSE 489 B MSE 469 1_555 B N THR 490 B THR 470 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? metalc ? metalc1 A OD1 ASP 482 A ASP 462 1_555 C CA CA . A CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc2 A OD1 ASP 483 A ASP 463 1_555 C CA CA . A CA 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4PXG _atom_sites.fract_transf_matrix[1][1] 0.014358 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005059 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005232 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 500 500 CA CA . D 3 HOH A 1 601 601 HOH HOH . D 3 HOH A 2 602 602 HOH HOH . D 3 HOH A 3 603 603 HOH HOH . D 3 HOH A 4 604 604 HOH HOH . D 3 HOH A 5 605 605 HOH HOH . D 3 HOH A 6 606 606 HOH HOH . D 3 HOH A 7 607 607 HOH HOH . D 3 HOH A 8 608 608 HOH HOH . D 3 HOH A 9 609 609 HOH HOH . D 3 HOH A 10 610 610 HOH HOH . D 3 HOH A 11 611 611 HOH HOH . D 3 HOH A 12 612 612 HOH HOH . D 3 HOH A 13 613 613 HOH HOH . D 3 HOH A 14 614 614 HOH HOH . D 3 HOH A 15 615 615 HOH HOH . D 3 HOH A 16 616 616 HOH HOH . D 3 HOH A 17 617 617 HOH HOH . D 3 HOH A 18 618 618 HOH HOH . E 3 HOH B 1 601 601 HOH HOH . E 3 HOH B 2 602 602 HOH HOH . E 3 HOH B 3 603 603 HOH HOH . E 3 HOH B 4 604 604 HOH HOH . E 3 HOH B 5 605 605 HOH HOH . E 3 HOH B 6 606 606 HOH HOH . E 3 HOH B 7 607 607 HOH HOH . E 3 HOH B 8 608 608 HOH HOH . E 3 HOH B 9 609 609 HOH HOH . E 3 HOH B 10 610 610 HOH HOH . E 3 HOH B 11 611 611 HOH HOH . E 3 HOH B 12 612 612 HOH HOH . E 3 HOH B 13 613 613 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 34.057 _atom_site.Cartn_y 36.38 _atom_site.Cartn_z 10.989 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 71.34 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 500 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #