data_4PXX
#
_model_server_result.job_id            p1cliGGbmLLuvy0Z-M04lg 
_model_server_result.datetime_utc      '2025-01-11 03:18:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pxx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    4PXX 
#
_exptl.entry_id    4PXX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              408.571 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHOLIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4PXX 
_cell.length_a            41.847 
_cell.length_b            72.56 
_cell.length_c            74.335 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PXX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 202 A CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C O26 CHD . A CHD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc5 B ZN ZN . A ZN 301 1_555 C O25 CHD . A CHD 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? 
#
_chem_comp.formula           'C24 H40 O5' 
_chem_comp.formula_weight    408.571 
_chem_comp.id                CHD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 CHD sing 70 n n 
C1 C10 CHD sing 71 n n 
C1 H11 CHD sing 72 n n 
C1 H12A CHD sing 73 n n 
C2 C3 CHD sing 74 n n 
C2 H21 CHD sing 75 n n 
C2 H22 CHD sing 76 n n 
C3 O3 CHD sing 77 n n 
C3 C4 CHD sing 78 n n 
C3 H3 CHD sing 79 n n 
O3 HO3 CHD sing 80 n n 
C4 C5 CHD sing 81 n n 
C4 H41 CHD sing 82 n n 
C4 H42 CHD sing 83 n n 
C5 C6 CHD sing 84 n n 
C5 C10 CHD sing 85 n n 
C5 H5 CHD sing 86 n n 
C6 C7 CHD sing 87 n n 
C6 H61 CHD sing 88 n n 
C6 H62 CHD sing 89 n n 
C7 O7 CHD sing 90 n n 
C7 C8 CHD sing 91 n n 
C7 H7 CHD sing 92 n n 
O7 HO7 CHD sing 93 n n 
C8 C9 CHD sing 94 n n 
C8 C14 CHD sing 95 n n 
C8 H8 CHD sing 96 n n 
C9 C10 CHD sing 97 n n 
C9 C11 CHD sing 98 n n 
C9 H9 CHD sing 99 n n 
C10 C19 CHD sing 100 n n 
C11 C12 CHD sing 101 n n 
C11 H111 CHD sing 102 n n 
C11 H112 CHD sing 103 n n 
C12 O12 CHD sing 104 n n 
C12 C13 CHD sing 105 n n 
C12 H12 CHD sing 106 n n 
O12 HO12 CHD sing 107 n n 
C13 C14 CHD sing 108 n n 
C13 C17 CHD sing 109 n n 
C13 C18 CHD sing 110 n n 
C14 C15 CHD sing 111 n n 
C14 H14 CHD sing 112 n n 
C15 C16 CHD sing 113 n n 
C15 H151 CHD sing 114 n n 
C15 H152 CHD sing 115 n n 
C16 C17 CHD sing 116 n n 
C16 H161 CHD sing 117 n n 
C16 H162 CHD sing 118 n n 
C17 C20 CHD sing 119 n n 
C17 H17 CHD sing 120 n n 
C18 H181 CHD sing 121 n n 
C18 H182 CHD sing 122 n n 
C18 H183 CHD sing 123 n n 
C19 H191 CHD sing 124 n n 
C19 H192 CHD sing 125 n n 
C19 H193 CHD sing 126 n n 
C20 C21 CHD sing 127 n n 
C20 C22 CHD sing 128 n n 
C20 H20 CHD sing 129 n n 
C21 H211 CHD sing 130 n n 
C21 H212 CHD sing 131 n n 
C21 H213 CHD sing 132 n n 
C22 C23 CHD sing 133 n n 
C22 H221 CHD sing 134 n n 
C22 H222 CHD sing 135 n n 
C23 C24 CHD sing 136 n n 
C23 H231 CHD sing 137 n n 
C23 H232 CHD sing 138 n n 
O25 C24 CHD doub 139 n n 
C24 O26 CHD sing 140 n n 
O26 H26 CHD sing 141 n n 
#
_atom_sites.entry_id                     4PXX 
_atom_sites.fract_transf_matrix[1][1]    0.023897 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013782 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013453 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 262 ZN ZN . 
C 3 CHD A 1 302 3 CHD CHD . 
D 4 MG A 1 303 1 MG MG . 
E 5 HOH A 1 401 2 HOH HOH . 
E 5 HOH A 2 402 3 HOH HOH . 
E 5 HOH A 3 403 5 HOH HOH . 
E 5 HOH A 4 404 7 HOH HOH . 
E 5 HOH A 5 405 8 HOH HOH . 
E 5 HOH A 6 406 9 HOH HOH . 
E 5 HOH A 7 407 10 HOH HOH . 
E 5 HOH A 8 408 11 HOH HOH . 
E 5 HOH A 9 409 12 HOH HOH . 
E 5 HOH A 10 410 13 HOH HOH . 
E 5 HOH A 11 411 14 HOH HOH . 
E 5 HOH A 12 412 15 HOH HOH . 
E 5 HOH A 13 413 17 HOH HOH . 
E 5 HOH A 14 414 18 HOH HOH . 
E 5 HOH A 15 415 19 HOH HOH . 
E 5 HOH A 16 416 21 HOH HOH . 
E 5 HOH A 17 417 23 HOH HOH . 
E 5 HOH A 18 418 24 HOH HOH . 
E 5 HOH A 19 419 25 HOH HOH . 
E 5 HOH A 20 420 26 HOH HOH . 
E 5 HOH A 21 421 27 HOH HOH . 
E 5 HOH A 22 422 28 HOH HOH . 
E 5 HOH A 23 423 29 HOH HOH . 
E 5 HOH A 24 424 30 HOH HOH . 
E 5 HOH A 25 425 31 HOH HOH . 
E 5 HOH A 26 426 32 HOH HOH . 
E 5 HOH A 27 427 33 HOH HOH . 
E 5 HOH A 28 428 34 HOH HOH . 
E 5 HOH A 29 429 35 HOH HOH . 
E 5 HOH A 30 430 36 HOH HOH . 
E 5 HOH A 31 431 37 HOH HOH . 
E 5 HOH A 32 432 38 HOH HOH . 
E 5 HOH A 33 433 39 HOH HOH . 
E 5 HOH A 34 434 41 HOH HOH . 
E 5 HOH A 35 435 44 HOH HOH . 
E 5 HOH A 36 436 45 HOH HOH . 
E 5 HOH A 37 437 47 HOH HOH . 
E 5 HOH A 38 438 48 HOH HOH . 
E 5 HOH A 39 439 49 HOH HOH . 
E 5 HOH A 40 440 51 HOH HOH . 
E 5 HOH A 41 441 52 HOH HOH . 
E 5 HOH A 42 442 53 HOH HOH . 
E 5 HOH A 43 443 54 HOH HOH . 
E 5 HOH A 44 444 55 HOH HOH . 
E 5 HOH A 45 445 56 HOH HOH . 
E 5 HOH A 46 446 57 HOH HOH . 
E 5 HOH A 47 447 59 HOH HOH . 
E 5 HOH A 48 448 60 HOH HOH . 
E 5 HOH A 49 449 61 HOH HOH . 
E 5 HOH A 50 450 62 HOH HOH . 
E 5 HOH A 51 451 63 HOH HOH . 
E 5 HOH A 52 452 64 HOH HOH . 
E 5 HOH A 53 453 66 HOH HOH . 
E 5 HOH A 54 454 67 HOH HOH . 
E 5 HOH A 55 455 70 HOH HOH . 
E 5 HOH A 56 456 72 HOH HOH . 
E 5 HOH A 57 457 76 HOH HOH . 
E 5 HOH A 58 458 77 HOH HOH . 
E 5 HOH A 59 459 79 HOH HOH . 
E 5 HOH A 60 460 80 HOH HOH . 
E 5 HOH A 61 461 82 HOH HOH . 
E 5 HOH A 62 462 83 HOH HOH . 
E 5 HOH A 63 463 87 HOH HOH . 
E 5 HOH A 64 464 90 HOH HOH . 
E 5 HOH A 65 465 91 HOH HOH . 
E 5 HOH A 66 466 93 HOH HOH . 
E 5 HOH A 67 467 95 HOH HOH . 
E 5 HOH A 68 468 97 HOH HOH . 
E 5 HOH A 69 469 100 HOH HOH . 
E 5 HOH A 70 470 101 HOH HOH . 
E 5 HOH A 71 471 102 HOH HOH . 
E 5 HOH A 72 472 103 HOH HOH . 
E 5 HOH A 73 473 105 HOH HOH . 
E 5 HOH A 74 474 106 HOH HOH . 
E 5 HOH A 75 475 107 HOH HOH . 
E 5 HOH A 76 476 108 HOH HOH . 
E 5 HOH A 77 477 109 HOH HOH . 
E 5 HOH A 78 478 110 HOH HOH . 
E 5 HOH A 79 479 112 HOH HOH . 
E 5 HOH A 80 480 113 HOH HOH . 
E 5 HOH A 81 481 117 HOH HOH . 
E 5 HOH A 82 482 118 HOH HOH . 
E 5 HOH A 83 483 121 HOH HOH . 
E 5 HOH A 84 484 124 HOH HOH . 
E 5 HOH A 85 485 126 HOH HOH . 
E 5 HOH A 86 486 127 HOH HOH . 
E 5 HOH A 87 487 128 HOH HOH . 
E 5 HOH A 88 488 129 HOH HOH . 
E 5 HOH A 89 489 133 HOH HOH . 
E 5 HOH A 90 490 135 HOH HOH . 
E 5 HOH A 91 491 136 HOH HOH . 
E 5 HOH A 92 492 137 HOH HOH . 
E 5 HOH A 93 493 138 HOH HOH . 
E 5 HOH A 94 494 140 HOH HOH . 
E 5 HOH A 95 495 141 HOH HOH . 
E 5 HOH A 96 496 142 HOH HOH . 
E 5 HOH A 97 497 143 HOH HOH . 
E 5 HOH A 98 498 144 HOH HOH . 
E 5 HOH A 99 499 145 HOH HOH . 
E 5 HOH A 100 500 146 HOH HOH . 
E 5 HOH A 101 501 148 HOH HOH . 
E 5 HOH A 102 502 149 HOH HOH . 
E 5 HOH A 103 503 150 HOH HOH . 
E 5 HOH A 104 504 151 HOH HOH . 
E 5 HOH A 105 505 152 HOH HOH . 
E 5 HOH A 106 506 153 HOH HOH . 
E 5 HOH A 107 507 154 HOH HOH . 
E 5 HOH A 108 508 155 HOH HOH . 
E 5 HOH A 109 509 156 HOH HOH . 
E 5 HOH A 110 510 158 HOH HOH . 
E 5 HOH A 111 511 160 HOH HOH . 
E 5 HOH A 112 512 161 HOH HOH . 
E 5 HOH A 113 513 163 HOH HOH . 
E 5 HOH A 114 514 164 HOH HOH . 
E 5 HOH A 115 515 165 HOH HOH . 
E 5 HOH A 116 516 166 HOH HOH . 
E 5 HOH A 117 517 167 HOH HOH . 
E 5 HOH A 118 518 168 HOH HOH . 
E 5 HOH A 119 519 169 HOH HOH . 
E 5 HOH A 120 520 171 HOH HOH . 
E 5 HOH A 121 521 172 HOH HOH . 
E 5 HOH A 122 522 173 HOH HOH . 
E 5 HOH A 123 523 174 HOH HOH . 
E 5 HOH A 124 524 175 HOH HOH . 
E 5 HOH A 125 525 176 HOH HOH . 
E 5 HOH A 126 526 177 HOH HOH . 
E 5 HOH A 127 527 179 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CHD . . . C 3 40.086 70.66 19.083 0.85 19.49 ? C1 CHD 302 A 1 
HETATM 2 C C2 CHD . . . C 3 40.389 70.178 17.682 0.85 15.51 ? C2 CHD 302 A 1 
HETATM 3 C C3 CHD . . . C 3 41.651 69.402 17.631 0.85 20.18 ? C3 CHD 302 A 1 
HETATM 4 O O3 CHD . . . C 3 41.929 69.122 16.296 0.85 24.89 ? O3 CHD 302 A 1 
HETATM 5 C C4 CHD . . . C 3 42.824 70.142 18.224 0.85 20.72 ? C4 CHD 302 A 1 
HETATM 6 C C5 CHD . . . C 3 42.531 70.574 19.645 0.85 15.32 ? C5 CHD 302 A 1 
HETATM 7 C C6 CHD . . . C 3 43.764 71.291 20.148 0.85 18.54 ? C6 CHD 302 A 1 
HETATM 8 C C7 CHD . . . C 3 43.871 72.725 19.706 0.85 19.18 ? C7 CHD 302 A 1 
HETATM 9 O O7 CHD . . . C 3 44.394 72.819 18.444 0.85 16.57 ? O7 CHD 302 A 1 
HETATM 10 C C8 CHD . . . C 3 42.591 73.49 19.809 0.85 18.82 ? C8 CHD 302 A 1 
HETATM 11 C C9 CHD . . . C 3 41.415 72.796 19.128 0.85 19.4 ? C9 CHD 302 A 1 
HETATM 12 C C10 CHD . . . C 3 41.247 71.39 19.731 0.85 22.44 ? C10 CHD 302 A 1 
HETATM 13 C C11 CHD . . . C 3 40.152 73.655 19.293 0.85 17.77 ? C11 CHD 302 A 1 
HETATM 14 C C12 CHD . . . C 3 40.354 75.052 18.665 0.85 21.49 ? C12 CHD 302 A 1 
HETATM 15 O O12 CHD . . . C 3 40.667 74.943 17.312 0.85 17.84 ? O12 CHD 302 A 1 
HETATM 16 C C13 CHD . . . C 3 41.411 75.799 19.451 0.85 14.33 ? C13 CHD 302 A 1 
HETATM 17 C C14 CHD . . . C 3 42.656 74.974 19.317 0.85 12.58 ? C14 CHD 302 A 1 
HETATM 18 C C15 CHD . . . C 3 43.724 75.844 19.948 0.85 12.09 ? C15 CHD 302 A 1 
HETATM 19 C C16 CHD . . . C 3 43.313 77.244 19.484 0.85 12.84 ? C16 CHD 302 A 1 
HETATM 20 C C17 CHD . . . C 3 41.906 77.121 18.899 0.85 11.02 ? C17 CHD 302 A 1 
HETATM 21 C C18 CHD . . . C 3 40.849 76.054 20.797 0.85 16.5 ? C18 CHD 302 A 1 
HETATM 22 C C19 CHD . . . C 3 40.84 71.549 21.168 0.85 17.33 ? C19 CHD 302 A 1 
HETATM 23 C C20 CHD . . . C 3 41.108 78.429 19.13 0.85 10.71 ? C20 CHD 302 A 1 
HETATM 24 C C21 CHD . . . C 3 39.715 78.252 18.622 0.85 12.91 ? C21 CHD 302 A 1 
HETATM 25 C C22 CHD . . . C 3 41.773 79.533 18.302 0.85 11.16 ? C22 CHD 302 A 1 
HETATM 26 C C23 CHD . . . C 3 41.145 80.901 18.535 0.85 10.54 ? C23 CHD 302 A 1 
HETATM 27 O O25 CHD . . . C 3 41.502 82.104 16.475 0.85 8.91 ? O25 CHD 302 A 1 
HETATM 28 C C24 CHD . . . C 3 41.854 81.943 17.672 0.85 5.94 ? C24 CHD 302 A 1 
HETATM 29 O O26 CHD . . . C 3 42.786 82.673 18.141 0.85 5.17 ? O26 CHD 302 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           325 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           29 
#