data_4PXZ
#
_model_server_result.job_id            ZZbnq13sR_Sn9wLwFsCsSQ 
_model_server_result.datetime_utc      '2024-11-16 22:31:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4pxz 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1203}' 
#
_entry.id    4PXZ 
#
_exptl.entry_id    4PXZ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4PXZ 
_cell.length_a            65.11 
_cell.length_b            104.17 
_cell.length_c            169.43 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PXZ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 26 A CYS 17 1_555 A SG CYS 385 A CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 106 A CYS 97 1_555 A SG CYS 184 A CYS 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 362 n n 
C10 C9 OLC doub 363 n n 
C10 C11 OLC sing 364 n n 
C9 C8 OLC sing 365 n n 
C17 C16 OLC sing 366 z n 
C11 C12 OLC sing 367 n n 
C8 C7 OLC sing 368 n n 
C24 C22 OLC sing 369 n n 
C24 O25 OLC sing 370 n n 
C16 C15 OLC sing 371 n n 
C12 C13 OLC sing 372 n n 
C7 C6 OLC sing 373 n n 
C15 C14 OLC sing 374 n n 
C13 C14 OLC sing 375 n n 
C6 C5 OLC sing 376 n n 
C5 C4 OLC sing 377 n n 
C4 C3 OLC sing 378 n n 
C3 C2 OLC sing 379 n n 
C2 C1 OLC sing 380 n n 
C21 C22 OLC sing 381 n n 
C21 O20 OLC sing 382 n n 
C1 O19 OLC doub 383 n n 
C1 O20 OLC sing 384 n n 
C22 O23 OLC sing 385 n n 
C18 H18 OLC sing 386 n n 
C18 H18A OLC sing 387 n n 
C18 H18B OLC sing 388 n n 
C10 H10 OLC sing 389 n n 
C9 H9 OLC sing 390 n n 
C17 H17 OLC sing 391 n n 
C17 H17A OLC sing 392 n n 
C11 H11 OLC sing 393 n n 
C11 H11A OLC sing 394 n n 
C8 H8 OLC sing 395 n n 
C8 H8A OLC sing 396 n n 
C24 H24 OLC sing 397 n n 
C24 H24A OLC sing 398 n n 
C16 H16 OLC sing 399 n n 
C16 H16A OLC sing 400 n n 
C12 H12 OLC sing 401 n n 
C12 H12A OLC sing 402 n n 
C7 H7 OLC sing 403 n n 
C7 H7A OLC sing 404 n n 
C15 H15 OLC sing 405 n n 
C15 H15A OLC sing 406 n n 
C13 H13 OLC sing 407 n n 
C13 H13A OLC sing 408 n n 
C6 H6 OLC sing 409 n n 
C6 H6A OLC sing 410 n n 
C14 H14 OLC sing 411 n n 
C14 H14A OLC sing 412 n n 
C5 H5 OLC sing 413 n n 
C5 H5A OLC sing 414 n n 
C4 H4 OLC sing 415 n n 
C4 H4A OLC sing 416 n n 
C3 H3 OLC sing 417 n n 
C3 H3A OLC sing 418 n n 
C2 H2 OLC sing 419 n n 
C2 H2A OLC sing 420 n n 
C21 H21 OLC sing 421 n n 
C21 H21A OLC sing 422 n n 
C22 H22 OLC sing 423 n n 
O25 HO25 OLC sing 424 n n 
O23 HO23 OLC sing 425 n n 
#
_atom_sites.entry_id                     4PXZ 
_atom_sites.fract_transf_matrix[1][1]    0.015359 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0096 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005902 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 6AD A 1 1201 1 6AD RES . 
C 3 CLR A 1 1202 1 CLR CLR . 
D 4 OLC A 1 1203 3 OLC OLC . 
E 4 OLC A 1 1204 4 OLC OLC . 
F 4 OLC A 1 1205 5 OLC OLC . 
G 5 PEG A 1 1206 6 PEG PEG . 
H 6 HOH A 1 1301 1 HOH HOH . 
H 6 HOH A 2 1302 2 HOH HOH . 
H 6 HOH A 3 1303 4 HOH HOH . 
H 6 HOH A 4 1304 5 HOH HOH . 
H 6 HOH A 5 1305 8 HOH HOH . 
H 6 HOH A 6 1306 9 HOH HOH . 
H 6 HOH A 7 1307 10 HOH HOH . 
H 6 HOH A 8 1308 11 HOH HOH . 
H 6 HOH A 9 1309 12 HOH HOH . 
H 6 HOH A 10 1310 13 HOH HOH . 
H 6 HOH A 11 1311 14 HOH HOH . 
H 6 HOH A 12 1312 15 HOH HOH . 
H 6 HOH A 13 1313 16 HOH HOH . 
H 6 HOH A 14 1314 17 HOH HOH . 
H 6 HOH A 15 1315 18 HOH HOH . 
H 6 HOH A 16 1316 21 HOH HOH . 
H 6 HOH A 17 1317 22 HOH HOH . 
H 6 HOH A 18 1318 1318 HOH HOH . 
H 6 HOH A 19 1319 24 HOH HOH . 
H 6 HOH A 20 1320 25 HOH HOH . 
H 6 HOH A 21 1321 26 HOH HOH . 
H 6 HOH A 22 1322 27 HOH HOH . 
H 6 HOH A 23 1323 28 HOH HOH . 
H 6 HOH A 24 1324 29 HOH HOH . 
H 6 HOH A 25 1325 30 HOH HOH . 
H 6 HOH A 26 1326 31 HOH HOH . 
H 6 HOH A 27 1327 32 HOH HOH . 
H 6 HOH A 28 1328 33 HOH HOH . 
H 6 HOH A 29 1329 34 HOH HOH . 
H 6 HOH A 30 1330 35 HOH HOH . 
H 6 HOH A 31 1331 36 HOH HOH . 
H 6 HOH A 32 1332 37 HOH HOH . 
H 6 HOH A 33 1333 38 HOH HOH . 
H 6 HOH A 34 1334 39 HOH HOH . 
H 6 HOH A 35 1335 41 HOH HOH . 
H 6 HOH A 36 1336 42 HOH HOH . 
H 6 HOH A 37 1337 43 HOH HOH . 
H 6 HOH A 38 1338 44 HOH HOH . 
H 6 HOH A 39 1339 45 HOH HOH . 
H 6 HOH A 40 1340 47 HOH HOH . 
H 6 HOH A 41 1341 48 HOH HOH . 
H 6 HOH A 42 1342 49 HOH HOH . 
H 6 HOH A 43 1343 50 HOH HOH . 
H 6 HOH A 44 1344 51 HOH HOH . 
H 6 HOH A 45 1345 52 HOH HOH . 
H 6 HOH A 46 1346 53 HOH HOH . 
H 6 HOH A 47 1347 54 HOH HOH . 
H 6 HOH A 48 1348 57 HOH HOH . 
H 6 HOH A 49 1349 59 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 OLC . . . D 4 1.405 2.085 47.435 1 69.84 ? C10 OLC 1203 A 1 
HETATM 2 C C9 OLC . . . D 4 0.157 2.006 48.319 1 70.83 ? C9 OLC 1203 A 1 
HETATM 3 C C8 OLC . . . D 4 0.317 1.202 49.614 1 71.94 ? C8 OLC 1203 A 1 
HETATM 4 C C24 OLC . . . D 4 0.641 4.786 61.399 1 95.82 ? C24 OLC 1203 A 1 
HETATM 5 C C7 OLC . . . D 4 0.215 2.146 50.818 1 72.79 ? C7 OLC 1203 A 1 
HETATM 6 C C6 OLC . . . D 4 0.247 1.321 52.104 1 74.22 ? C6 OLC 1203 A 1 
HETATM 7 C C5 OLC . . . D 4 0.061 2.231 53.325 1 75.46 ? C5 OLC 1203 A 1 
HETATM 8 C C4 OLC . . . D 4 -0.732 1.465 54.383 1 77.3 ? C4 OLC 1203 A 1 
HETATM 9 C C3 OLC . . . D 4 -0.491 2.068 55.762 1 80.9 ? C3 OLC 1203 A 1 
HETATM 10 C C2 OLC . . . D 4 -1.491 1.463 56.748 1 84.54 ? C2 OLC 1203 A 1 
HETATM 11 C C21 OLC . . . D 4 -0.122 3.096 59.73 1 93.21 ? C21 OLC 1203 A 1 
HETATM 12 C C1 OLC . . . D 4 -0.936 1.526 58.174 1 88.6 ? C1 OLC 1203 A 1 
HETATM 13 C C22 OLC . . . D 4 -0.515 4.371 60.479 1 95.09 ? C22 OLC 1203 A 1 
HETATM 14 O O19 OLC . . . D 4 -0.38 0.544 58.667 1 89.86 ? O19 OLC 1203 A 1 
HETATM 15 O O25 OLC . . . D 4 0.508 4.151 62.677 1 95.55 ? O25 OLC 1203 A 1 
HETATM 16 O O23 OLC . . . D 4 -0.774 5.415 59.531 1 96.08 ? O23 OLC 1203 A 1 
HETATM 17 O O20 OLC . . . D 4 -1.178 2.699 58.836 1 91.24 ? O20 OLC 1203 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           17 
#