data_4PY1 # _model_server_result.job_id uao2QR-cuFWOJgUpZ3yEMw _model_server_result.datetime_utc '2025-01-02 22:28:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4py1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 4PY1 # _exptl.entry_id 4PY1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 368.413 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[(2,5-dimethoxyphenyl)sulfanyl]-3-(1-methyl-1H-pyrazol-4-yl)[1,2,4]triazolo[4,3-b]pyridazine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4PY1 _cell.length_a 36.47 _cell.length_b 73.51 _cell.length_c 103.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PY1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 189 A GLU 1053 1_555 A N PTR 190 A PTR 1054 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale2 A C PTR 190 A PTR 1054 1_555 A N TYR 191 A TYR 1055 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C17 H16 N6 O2 S' _chem_comp.formula_weight 368.413 _chem_comp.id 2YK _chem_comp.mon_nstd_flag . _chem_comp.name 6-[(2,5-dimethoxyphenyl)sulfanyl]-3-(1-methyl-1H-pyrazol-4-yl)[1,2,4]triazolo[4,3-b]pyridazine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 O2 2YK sing 1 n n S C10 2YK sing 2 n n S C7 2YK sing 3 n n C11 C10 2YK doub 4 n y C11 C12 2YK sing 5 n y C8 C7 2YK sing 6 n y C8 C9 2YK doub 7 n y O2 C12 2YK sing 8 n n C10 C15 2YK sing 9 n y C7 N6 2YK doub 10 n y C12 C13 2YK doub 11 n y C9 C6 2YK sing 12 n y N6 N5 2YK sing 13 n y C15 O1 2YK sing 14 n n C15 C14 2YK doub 15 n y C13 C14 2YK sing 16 n y C6 N5 2YK sing 17 n y C6 N4 2YK doub 18 n y N5 C5 2YK sing 19 n y O1 C16 2YK sing 20 n n N4 N3 2YK sing 21 n y C5 N3 2YK doub 22 n y C5 C3 2YK sing 23 n n C2 C3 2YK doub 24 n y C2 N1 2YK sing 25 n y C3 C4 2YK sing 26 n y N1 C1 2YK sing 27 n n N1 N2 2YK sing 28 n y C4 N2 2YK doub 29 n y C4 H1 2YK sing 30 n n C9 H2 2YK sing 31 n n C13 H3 2YK sing 32 n n C8 H4 2YK sing 33 n n C16 H5 2YK sing 34 n n C16 H6 2YK sing 35 n n C16 H7 2YK sing 36 n n C17 H8 2YK sing 37 n n C17 H9 2YK sing 38 n n C17 H10 2YK sing 39 n n C11 H11 2YK sing 40 n n C14 H12 2YK sing 41 n n C2 H13 2YK sing 42 n n C1 H14 2YK sing 43 n n C1 H15 2YK sing 44 n n C1 H16 2YK sing 45 n n # _atom_sites.entry_id 4PY1 _atom_sites.fract_transf_matrix[1][1] 0.02742 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013604 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 2YK A 1 1201 999 2YK PFE . C 3 HOH A 1 1301 1 HOH HOH . C 3 HOH A 2 1302 2 HOH HOH . C 3 HOH A 3 1303 3 HOH HOH . C 3 HOH A 4 1304 4 HOH HOH . C 3 HOH A 5 1305 5 HOH HOH . C 3 HOH A 6 1306 6 HOH HOH . C 3 HOH A 7 1307 7 HOH HOH . C 3 HOH A 8 1308 8 HOH HOH . C 3 HOH A 9 1309 9 HOH HOH . C 3 HOH A 10 1310 10 HOH HOH . C 3 HOH A 11 1311 11 HOH HOH . C 3 HOH A 12 1312 12 HOH HOH . C 3 HOH A 13 1313 13 HOH HOH . C 3 HOH A 14 1314 14 HOH HOH . C 3 HOH A 15 1315 15 HOH HOH . C 3 HOH A 16 1316 16 HOH HOH . C 3 HOH A 17 1317 17 HOH HOH . C 3 HOH A 18 1318 18 HOH HOH . C 3 HOH A 19 1319 19 HOH HOH . C 3 HOH A 20 1320 20 HOH HOH . C 3 HOH A 21 1321 21 HOH HOH . C 3 HOH A 22 1322 22 HOH HOH . C 3 HOH A 23 1323 23 HOH HOH . C 3 HOH A 24 1324 24 HOH HOH . C 3 HOH A 25 1325 25 HOH HOH . C 3 HOH A 26 1326 26 HOH HOH . C 3 HOH A 27 1327 27 HOH HOH . C 3 HOH A 28 1328 28 HOH HOH . C 3 HOH A 29 1329 29 HOH HOH . C 3 HOH A 30 1330 30 HOH HOH . C 3 HOH A 31 1331 31 HOH HOH . C 3 HOH A 32 1332 32 HOH HOH . C 3 HOH A 33 1333 33 HOH HOH . C 3 HOH A 34 1334 35 HOH HOH . C 3 HOH A 35 1335 36 HOH HOH . C 3 HOH A 36 1336 37 HOH HOH . C 3 HOH A 37 1337 38 HOH HOH . C 3 HOH A 38 1338 39 HOH HOH . C 3 HOH A 39 1339 40 HOH HOH . C 3 HOH A 40 1340 41 HOH HOH . C 3 HOH A 41 1341 42 HOH HOH . C 3 HOH A 42 1342 43 HOH HOH . C 3 HOH A 43 1343 44 HOH HOH . C 3 HOH A 44 1344 45 HOH HOH . C 3 HOH A 45 1345 46 HOH HOH . C 3 HOH A 46 1346 48 HOH HOH . C 3 HOH A 47 1347 49 HOH HOH . C 3 HOH A 48 1348 50 HOH HOH . C 3 HOH A 49 1349 51 HOH HOH . C 3 HOH A 50 1350 52 HOH HOH . C 3 HOH A 51 1351 55 HOH HOH . C 3 HOH A 52 1352 56 HOH HOH . C 3 HOH A 53 1353 57 HOH HOH . C 3 HOH A 54 1354 58 HOH HOH . C 3 HOH A 55 1355 60 HOH HOH . C 3 HOH A 56 1356 61 HOH HOH . C 3 HOH A 57 1357 62 HOH HOH . C 3 HOH A 58 1358 63 HOH HOH . C 3 HOH A 59 1359 64 HOH HOH . C 3 HOH A 60 1360 66 HOH HOH . C 3 HOH A 61 1361 67 HOH HOH . C 3 HOH A 62 1362 68 HOH HOH . C 3 HOH A 63 1363 69 HOH HOH . C 3 HOH A 64 1364 71 HOH HOH . C 3 HOH A 65 1365 72 HOH HOH . C 3 HOH A 66 1366 73 HOH HOH . C 3 HOH A 67 1367 75 HOH HOH . C 3 HOH A 68 1368 76 HOH HOH . C 3 HOH A 69 1369 77 HOH HOH . C 3 HOH A 70 1370 78 HOH HOH . C 3 HOH A 71 1371 79 HOH HOH . C 3 HOH A 72 1372 80 HOH HOH . C 3 HOH A 73 1373 81 HOH HOH . C 3 HOH A 74 1374 82 HOH HOH . C 3 HOH A 75 1375 83 HOH HOH . C 3 HOH A 76 1376 84 HOH HOH . C 3 HOH A 77 1377 85 HOH HOH . C 3 HOH A 78 1378 86 HOH HOH . C 3 HOH A 79 1379 87 HOH HOH . C 3 HOH A 80 1380 88 HOH HOH . C 3 HOH A 81 1381 89 HOH HOH . C 3 HOH A 82 1382 90 HOH HOH . C 3 HOH A 83 1383 91 HOH HOH . C 3 HOH A 84 1384 92 HOH HOH . C 3 HOH A 85 1385 93 HOH HOH . C 3 HOH A 86 1386 94 HOH HOH . C 3 HOH A 87 1387 95 HOH HOH . C 3 HOH A 88 1388 96 HOH HOH . C 3 HOH A 89 1389 97 HOH HOH . C 3 HOH A 90 1390 98 HOH HOH . C 3 HOH A 91 1391 99 HOH HOH . C 3 HOH A 92 1392 101 HOH HOH . C 3 HOH A 93 1393 102 HOH HOH . C 3 HOH A 94 1394 103 HOH HOH . C 3 HOH A 95 1395 104 HOH HOH . C 3 HOH A 96 1396 105 HOH HOH . C 3 HOH A 97 1397 106 HOH HOH . C 3 HOH A 98 1398 107 HOH HOH . C 3 HOH A 99 1399 109 HOH HOH . C 3 HOH A 100 1400 110 HOH HOH . C 3 HOH A 101 1401 111 HOH HOH . C 3 HOH A 102 1402 113 HOH HOH . C 3 HOH A 103 1403 114 HOH HOH . C 3 HOH A 104 1404 115 HOH HOH . C 3 HOH A 105 1405 116 HOH HOH . C 3 HOH A 106 1406 117 HOH HOH . C 3 HOH A 107 1407 118 HOH HOH . C 3 HOH A 108 1408 119 HOH HOH . C 3 HOH A 109 1409 120 HOH HOH . C 3 HOH A 110 1410 122 HOH HOH . C 3 HOH A 111 1411 123 HOH HOH . C 3 HOH A 112 1412 124 HOH HOH . C 3 HOH A 113 1413 125 HOH HOH . C 3 HOH A 114 1414 126 HOH HOH . C 3 HOH A 115 1415 127 HOH HOH . C 3 HOH A 116 1416 128 HOH HOH . C 3 HOH A 117 1417 129 HOH HOH . C 3 HOH A 118 1418 130 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N3 2YK . . . B 2 9.365 -11.398 16.279 1 34.54 ? N3 2YK 1201 A 1 HETATM 2 C C4 2YK . . . B 2 7.251 -9.808 17.842 1 35.41 ? C4 2YK 1201 A 1 HETATM 3 N N2 2YK . . . B 2 6.239 -8.996 18.182 1 37.41 ? N2 2YK 1201 A 1 HETATM 4 C C7 2YK . . . B 2 9.632 -8.628 12.807 1 40.37 ? C7 2YK 1201 A 1 HETATM 5 C C6 2YK . . . B 2 10.335 -10.818 14.398 1 36.28 ? C6 2YK 1201 A 1 HETATM 6 C C9 2YK . . . B 2 11.096 -10.591 13.214 1 38.29 ? C9 2YK 1201 A 1 HETATM 7 C C13 2YK . . . B 2 5.516 -5.217 14.166 1 41.67 ? C13 2YK 1201 A 1 HETATM 8 C C8 2YK . . . B 2 10.748 -9.505 12.426 1 40.6 ? C8 2YK 1201 A 1 HETATM 9 N N5 2YK . . . B 2 9.28 -9.876 14.667 1 33.95 ? N5 2YK 1201 A 1 HETATM 10 C C16 2YK . . . B 2 8.943 -5.488 16.15 1 40.73 ? C16 2YK 1201 A 1 HETATM 11 C C17 2YK . . . B 2 3.343 -5.842 11.376 1 41.37 ? C17 2YK 1201 A 1 HETATM 12 O O2 2YK . . . B 2 3.981 -5.466 12.547 1 44.33 ? O2 2YK 1201 A 1 HETATM 13 C C12 2YK . . . B 2 5.331 -5.679 12.859 1 42.56 ? C12 2YK 1201 A 1 HETATM 14 C C11 2YK . . . B 2 6.433 -6.249 12.125 1 39.76 ? C11 2YK 1201 A 1 HETATM 15 C C14 2YK . . . B 2 6.739 -5.265 14.766 1 38.75 ? C14 2YK 1201 A 1 HETATM 16 C C15 2YK . . . B 2 7.855 -5.82 14.089 1 38.41 ? C15 2YK 1201 A 1 HETATM 17 O O1 2YK . . . B 2 9.054 -5.763 14.754 1 39.2 ? O1 2YK 1201 A 1 HETATM 18 C C10 2YK . . . B 2 7.732 -6.357 12.747 1 38.53 ? C10 2YK 1201 A 1 HETATM 19 S S 2YK . . . B 2 9.085 -7.166 11.855 1 40.73 ? S 2YK 1201 A 1 HETATM 20 N N4 2YK . . . B 2 10.341 -11.733 15.401 1 34.73 ? N4 2YK 1201 A 1 HETATM 21 N N6 2YK . . . B 2 8.942 -8.841 13.897 1 37.3 ? N6 2YK 1201 A 1 HETATM 22 C C5 2YK . . . B 2 8.708 -10.254 15.868 1 33.79 ? C5 2YK 1201 A 1 HETATM 23 C C3 2YK . . . B 2 7.653 -9.56 16.504 1 36.01 ? C3 2YK 1201 A 1 HETATM 24 C C2 2YK . . . B 2 6.829 -8.498 16.021 1 38.79 ? C2 2YK 1201 A 1 HETATM 25 N N1 2YK . . . B 2 5.987 -8.217 17.071 1 40.84 ? N1 2YK 1201 A 1 HETATM 26 C C1 2YK . . . B 2 4.898 -7.249 17.097 1 44.09 ? C1 2YK 1201 A 1 # _model_server_stats.io_time_ms 110 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 26 #