data_4PY3
#
_model_server_result.job_id            sUue84b2jnhpMRmPCMVzAg 
_model_server_result.datetime_utc      '2024-10-28 02:23:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4py3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":302}' 
#
_entry.id    4PY3 
#
_exptl.entry_id    4PY3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.24 
_cell.angle_gamma         90 
_cell.entry_id            4PY3 
_cell.length_a            55.81 
_cell.length_b            324.16 
_cell.length_c            86.13 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4PY3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
PISA monomeric 1 software_defined_assembly 3 
PISA monomeric 1 software_defined_assembly 4 
PISA monomeric 1 software_defined_assembly 5 
PISA monomeric 1 software_defined_assembly 6 
PISA monomeric 1 software_defined_assembly 7 
PISA monomeric 1 software_defined_assembly 8 
PISA monomeric 1 software_defined_assembly 9 
PISA monomeric 1 software_defined_assembly 10 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,M 1 1 
B,N 2 1 
C,O 3 1 
D,P 4 1 
E,Q 5 1 
F,R 6 1 
G,S 7 1 
H,T 8 1 
I,K,L,U 9 1 
J,V 10 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     4PY3 
_atom_sites.fract_transf_matrix[1][1]    0.017918 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006254 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003085 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012297 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 2 EDO I 1 301 6 EDO EDO . 
L 2 EDO I 1 302 7 EDO EDO . 
M 3 HOH A 1 301 24 HOH HOH . 
M 3 HOH A 2 302 51 HOH HOH . 
M 3 HOH A 3 303 81 HOH HOH . 
M 3 HOH A 4 304 92 HOH HOH . 
M 3 HOH A 5 305 117 HOH HOH . 
M 3 HOH A 6 306 131 HOH HOH . 
M 3 HOH A 7 307 144 HOH HOH . 
M 3 HOH A 8 308 146 HOH HOH . 
M 3 HOH A 9 309 153 HOH HOH . 
M 3 HOH A 10 310 156 HOH HOH . 
M 3 HOH A 11 311 157 HOH HOH . 
M 3 HOH A 12 312 158 HOH HOH . 
M 3 HOH A 13 313 200 HOH HOH . 
M 3 HOH A 14 314 222 HOH HOH . 
N 3 HOH B 1 301 8 HOH HOH . 
N 3 HOH B 2 302 17 HOH HOH . 
N 3 HOH B 3 303 25 HOH HOH . 
N 3 HOH B 4 304 26 HOH HOH . 
N 3 HOH B 5 305 27 HOH HOH . 
N 3 HOH B 6 306 31 HOH HOH . 
N 3 HOH B 7 307 33 HOH HOH . 
N 3 HOH B 8 308 54 HOH HOH . 
N 3 HOH B 9 309 55 HOH HOH . 
N 3 HOH B 10 310 57 HOH HOH . 
N 3 HOH B 11 311 65 HOH HOH . 
N 3 HOH B 12 312 68 HOH HOH . 
N 3 HOH B 13 313 69 HOH HOH . 
N 3 HOH B 14 314 72 HOH HOH . 
N 3 HOH B 15 315 74 HOH HOH . 
N 3 HOH B 16 316 100 HOH HOH . 
N 3 HOH B 17 317 114 HOH HOH . 
N 3 HOH B 18 318 116 HOH HOH . 
N 3 HOH B 19 319 123 HOH HOH . 
N 3 HOH B 20 320 126 HOH HOH . 
N 3 HOH B 21 321 128 HOH HOH . 
N 3 HOH B 22 322 132 HOH HOH . 
N 3 HOH B 23 323 141 HOH HOH . 
N 3 HOH B 24 324 159 HOH HOH . 
N 3 HOH B 25 325 161 HOH HOH . 
N 3 HOH B 26 326 220 HOH HOH . 
N 3 HOH B 27 327 223 HOH HOH . 
N 3 HOH B 28 328 224 HOH HOH . 
N 3 HOH B 29 329 225 HOH HOH . 
N 3 HOH B 30 330 226 HOH HOH . 
N 3 HOH B 31 331 227 HOH HOH . 
N 3 HOH B 32 332 228 HOH HOH . 
O 3 HOH C 1 301 7 HOH HOH . 
O 3 HOH C 2 302 22 HOH HOH . 
O 3 HOH C 3 303 32 HOH HOH . 
O 3 HOH C 4 304 34 HOH HOH . 
O 3 HOH C 5 305 40 HOH HOH . 
O 3 HOH C 6 306 48 HOH HOH . 
O 3 HOH C 7 307 83 HOH HOH . 
O 3 HOH C 8 308 101 HOH HOH . 
O 3 HOH C 9 309 103 HOH HOH . 
O 3 HOH C 10 310 113 HOH HOH . 
O 3 HOH C 11 311 150 HOH HOH . 
O 3 HOH C 12 312 165 HOH HOH . 
O 3 HOH C 13 313 166 HOH HOH . 
O 3 HOH C 14 314 167 HOH HOH . 
O 3 HOH C 15 315 168 HOH HOH . 
O 3 HOH C 16 316 169 HOH HOH . 
O 3 HOH C 17 317 213 HOH HOH . 
O 3 HOH C 18 318 214 HOH HOH . 
O 3 HOH C 19 319 229 HOH HOH . 
O 3 HOH C 20 320 233 HOH HOH . 
O 3 HOH C 21 321 234 HOH HOH . 
O 3 HOH C 22 322 235 HOH HOH . 
O 3 HOH C 23 323 236 HOH HOH . 
O 3 HOH C 24 324 237 HOH HOH . 
O 3 HOH C 25 325 238 HOH HOH . 
P 3 HOH D 1 301 13 HOH HOH . 
P 3 HOH D 2 302 148 HOH HOH . 
P 3 HOH D 3 303 154 HOH HOH . 
P 3 HOH D 4 304 155 HOH HOH . 
P 3 HOH D 5 305 170 HOH HOH . 
P 3 HOH D 6 306 171 HOH HOH . 
P 3 HOH D 7 307 239 HOH HOH . 
P 3 HOH D 8 308 240 HOH HOH . 
Q 3 HOH E 1 301 4 HOH HOH . 
Q 3 HOH E 2 302 5 HOH HOH . 
Q 3 HOH E 3 303 10 HOH HOH . 
Q 3 HOH E 4 304 16 HOH HOH . 
Q 3 HOH E 5 305 21 HOH HOH . 
Q 3 HOH E 6 306 23 HOH HOH . 
Q 3 HOH E 7 307 30 HOH HOH . 
Q 3 HOH E 8 308 36 HOH HOH . 
Q 3 HOH E 9 309 37 HOH HOH . 
Q 3 HOH E 10 310 47 HOH HOH . 
Q 3 HOH E 11 311 50 HOH HOH . 
Q 3 HOH E 12 312 58 HOH HOH . 
Q 3 HOH E 13 313 62 HOH HOH . 
Q 3 HOH E 14 314 66 HOH HOH . 
Q 3 HOH E 15 315 67 HOH HOH . 
Q 3 HOH E 16 316 70 HOH HOH . 
Q 3 HOH E 17 317 75 HOH HOH . 
Q 3 HOH E 18 318 79 HOH HOH . 
Q 3 HOH E 19 319 80 HOH HOH . 
Q 3 HOH E 20 320 82 HOH HOH . 
Q 3 HOH E 21 321 84 HOH HOH . 
Q 3 HOH E 22 322 87 HOH HOH . 
Q 3 HOH E 23 323 88 HOH HOH . 
Q 3 HOH E 24 324 95 HOH HOH . 
Q 3 HOH E 25 325 104 HOH HOH . 
Q 3 HOH E 26 326 105 HOH HOH . 
Q 3 HOH E 27 327 110 HOH HOH . 
Q 3 HOH E 28 328 111 HOH HOH . 
Q 3 HOH E 29 329 125 HOH HOH . 
Q 3 HOH E 30 330 127 HOH HOH . 
Q 3 HOH E 31 331 133 HOH HOH . 
Q 3 HOH E 32 332 135 HOH HOH . 
Q 3 HOH E 33 333 136 HOH HOH . 
Q 3 HOH E 34 334 138 HOH HOH . 
Q 3 HOH E 35 335 139 HOH HOH . 
Q 3 HOH E 36 336 142 HOH HOH . 
Q 3 HOH E 37 337 143 HOH HOH . 
Q 3 HOH E 38 338 149 HOH HOH . 
Q 3 HOH E 39 339 172 HOH HOH . 
Q 3 HOH E 40 340 173 HOH HOH . 
Q 3 HOH E 41 341 174 HOH HOH . 
Q 3 HOH E 42 342 175 HOH HOH . 
Q 3 HOH E 43 343 176 HOH HOH . 
Q 3 HOH E 44 344 177 HOH HOH . 
Q 3 HOH E 45 345 202 HOH HOH . 
Q 3 HOH E 46 346 203 HOH HOH . 
Q 3 HOH E 47 347 204 HOH HOH . 
Q 3 HOH E 48 348 205 HOH HOH . 
Q 3 HOH E 49 349 206 HOH HOH . 
Q 3 HOH E 50 350 207 HOH HOH . 
Q 3 HOH E 51 351 215 HOH HOH . 
Q 3 HOH E 52 352 219 HOH HOH . 
Q 3 HOH E 53 353 241 HOH HOH . 
Q 3 HOH E 54 354 242 HOH HOH . 
Q 3 HOH E 55 355 243 HOH HOH . 
Q 3 HOH E 56 356 244 HOH HOH . 
R 3 HOH F 1 301 107 HOH HOH . 
R 3 HOH F 2 302 147 HOH HOH . 
S 3 HOH G 1 301 14 HOH HOH . 
S 3 HOH G 2 302 52 HOH HOH . 
S 3 HOH G 3 303 61 HOH HOH . 
S 3 HOH G 4 304 86 HOH HOH . 
S 3 HOH G 5 305 120 HOH HOH . 
S 3 HOH G 6 306 145 HOH HOH . 
S 3 HOH G 7 307 179 HOH HOH . 
S 3 HOH G 8 308 180 HOH HOH . 
S 3 HOH G 9 309 181 HOH HOH . 
S 3 HOH G 10 310 182 HOH HOH . 
S 3 HOH G 11 311 183 HOH HOH . 
S 3 HOH G 12 312 184 HOH HOH . 
S 3 HOH G 13 313 209 HOH HOH . 
S 3 HOH G 14 314 216 HOH HOH . 
S 3 HOH G 15 315 221 HOH HOH . 
S 3 HOH G 16 316 245 HOH HOH . 
S 3 HOH G 17 317 246 HOH HOH . 
S 3 HOH G 18 318 247 HOH HOH . 
S 3 HOH G 19 319 248 HOH HOH . 
S 3 HOH G 20 320 249 HOH HOH . 
T 3 HOH H 1 301 45 HOH HOH . 
T 3 HOH H 2 302 77 HOH HOH . 
T 3 HOH H 3 303 250 HOH HOH . 
T 3 HOH H 4 304 251 HOH HOH . 
T 3 HOH H 5 305 252 HOH HOH . 
U 3 HOH I 1 401 1 HOH HOH . 
U 3 HOH I 2 402 2 HOH HOH . 
U 3 HOH I 3 403 6 HOH HOH . 
U 3 HOH I 4 404 11 HOH HOH . 
U 3 HOH I 5 405 18 HOH HOH . 
U 3 HOH I 6 406 28 HOH HOH . 
U 3 HOH I 7 407 29 HOH HOH . 
U 3 HOH I 8 408 38 HOH HOH . 
U 3 HOH I 9 409 39 HOH HOH . 
U 3 HOH I 10 410 42 HOH HOH . 
U 3 HOH I 11 411 43 HOH HOH . 
U 3 HOH I 12 412 53 HOH HOH . 
U 3 HOH I 13 413 56 HOH HOH . 
U 3 HOH I 14 414 59 HOH HOH . 
U 3 HOH I 15 415 60 HOH HOH . 
U 3 HOH I 16 416 63 HOH HOH . 
U 3 HOH I 17 417 64 HOH HOH . 
U 3 HOH I 18 418 71 HOH HOH . 
U 3 HOH I 19 419 85 HOH HOH . 
U 3 HOH I 20 420 90 HOH HOH . 
U 3 HOH I 21 421 91 HOH HOH . 
U 3 HOH I 22 422 93 HOH HOH . 
U 3 HOH I 23 423 94 HOH HOH . 
U 3 HOH I 24 424 102 HOH HOH . 
U 3 HOH I 25 425 108 HOH HOH . 
U 3 HOH I 26 426 112 HOH HOH . 
U 3 HOH I 27 427 115 HOH HOH . 
U 3 HOH I 28 428 118 HOH HOH . 
U 3 HOH I 29 429 119 HOH HOH . 
U 3 HOH I 30 430 124 HOH HOH . 
U 3 HOH I 31 431 130 HOH HOH . 
U 3 HOH I 32 432 134 HOH HOH . 
U 3 HOH I 33 433 137 HOH HOH . 
U 3 HOH I 34 434 151 HOH HOH . 
U 3 HOH I 35 435 152 HOH HOH . 
U 3 HOH I 36 436 163 HOH HOH . 
U 3 HOH I 37 437 185 HOH HOH . 
U 3 HOH I 38 438 186 HOH HOH . 
U 3 HOH I 39 439 187 HOH HOH . 
U 3 HOH I 40 440 188 HOH HOH . 
U 3 HOH I 41 441 189 HOH HOH . 
U 3 HOH I 42 442 191 HOH HOH . 
U 3 HOH I 43 443 192 HOH HOH . 
U 3 HOH I 44 444 193 HOH HOH . 
U 3 HOH I 45 445 194 HOH HOH . 
U 3 HOH I 46 446 201 HOH HOH . 
U 3 HOH I 47 447 208 HOH HOH . 
U 3 HOH I 48 448 210 HOH HOH . 
U 3 HOH I 49 449 211 HOH HOH . 
U 3 HOH I 50 450 212 HOH HOH . 
U 3 HOH I 51 451 217 HOH HOH . 
U 3 HOH I 52 452 218 HOH HOH . 
U 3 HOH I 53 453 230 HOH HOH . 
U 3 HOH I 54 454 253 HOH HOH . 
U 3 HOH I 55 455 254 HOH HOH . 
U 3 HOH I 56 456 255 HOH HOH . 
U 3 HOH I 57 457 256 HOH HOH . 
U 3 HOH I 58 458 257 HOH HOH . 
U 3 HOH I 59 459 258 HOH HOH . 
U 3 HOH I 60 460 259 HOH HOH . 
U 3 HOH I 61 461 260 HOH HOH . 
U 3 HOH I 62 462 261 HOH HOH . 
U 3 HOH I 63 463 262 HOH HOH . 
U 3 HOH I 64 464 263 HOH HOH . 
U 3 HOH I 65 465 264 HOH HOH . 
U 3 HOH I 66 466 265 HOH HOH . 
U 3 HOH I 67 467 266 HOH HOH . 
U 3 HOH I 68 468 267 HOH HOH . 
U 3 HOH I 69 469 268 HOH HOH . 
U 3 HOH I 70 470 269 HOH HOH . 
V 3 HOH J 1 301 3 HOH HOH . 
V 3 HOH J 2 302 9 HOH HOH . 
V 3 HOH J 3 303 12 HOH HOH . 
V 3 HOH J 4 304 15 HOH HOH . 
V 3 HOH J 5 305 19 HOH HOH . 
V 3 HOH J 6 306 20 HOH HOH . 
V 3 HOH J 7 307 41 HOH HOH . 
V 3 HOH J 8 308 44 HOH HOH . 
V 3 HOH J 9 309 46 HOH HOH . 
V 3 HOH J 10 310 49 HOH HOH . 
V 3 HOH J 11 311 73 HOH HOH . 
V 3 HOH J 12 312 76 HOH HOH . 
V 3 HOH J 13 313 78 HOH HOH . 
V 3 HOH J 14 314 89 HOH HOH . 
V 3 HOH J 15 315 96 HOH HOH . 
V 3 HOH J 16 316 97 HOH HOH . 
V 3 HOH J 17 317 98 HOH HOH . 
V 3 HOH J 18 318 99 HOH HOH . 
V 3 HOH J 19 319 106 HOH HOH . 
V 3 HOH J 20 320 109 HOH HOH . 
V 3 HOH J 21 321 121 HOH HOH . 
V 3 HOH J 22 322 122 HOH HOH . 
V 3 HOH J 23 323 129 HOH HOH . 
V 3 HOH J 24 324 140 HOH HOH . 
V 3 HOH J 25 325 164 HOH HOH . 
V 3 HOH J 26 326 190 HOH HOH . 
V 3 HOH J 27 327 196 HOH HOH . 
V 3 HOH J 28 328 197 HOH HOH . 
V 3 HOH J 29 329 198 HOH HOH . 
V 3 HOH J 30 330 199 HOH HOH . 
V 3 HOH J 31 331 231 HOH HOH . 
V 3 HOH J 32 332 232 HOH HOH . 
V 3 HOH J 33 333 270 HOH HOH . 
V 3 HOH J 34 334 271 HOH HOH . 
V 3 HOH J 35 335 272 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . L 2 35.884 -31.912 113.983 1 58.02 ? C1 EDO 302 I 1 
HETATM 2 O O1 EDO . . . L 2 36.568 -31.776 115.235 1 59.48 ? O1 EDO 302 I 1 
HETATM 3 C C2 EDO . . . L 2 36.888 -31.774 112.848 1 58.47 ? C2 EDO 302 I 1 
HETATM 4 O O2 EDO . . . L 2 36.883 -32.976 112.071 1 57.05 ? O2 EDO 302 I 1 
#
_model_server_stats.io_time_ms              60 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#