data_4PYQ # _model_server_result.job_id 9vq3NhduJYJ0iHhe94Wy8A _model_server_result.datetime_utc '2024-11-05 16:33:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4pyq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":306}' # _entry.id 4PYQ # _exptl.entry_id 4PYQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4PYQ _cell.length_a 125.366 _cell.length_b 125.366 _cell.length_c 77.287 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PYQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 L N N ? 5 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O VAL 183 A VAL 226 1_555 E NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc2 A O ARG 184 A ARG 227 1_555 E NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc3 A O SER 186 A SER 229 1_555 E NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc4 A O PHE 189 A PHE 232 1_555 E NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc5 A O GLU 199 A GLU 242 1_555 H NA NA . B NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc6 E NA NA . A NA 303 1_555 B O GLU 199 B GLU 242 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc7 E NA NA . A NA 303 1_555 O O HOH . B HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.446 ? metalc ? metalc8 N O HOH . A HOH 489 1_555 H NA NA . B NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc9 B O VAL 183 B VAL 226 1_555 H NA NA . B NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc10 B O ARG 184 B ARG 227 1_555 H NA NA . B NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc11 B O SER 186 B SER 229 1_555 H NA NA . B NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc12 B O PHE 189 B PHE 232 1_555 H NA NA . B NA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 335 n n S O2 SO4 doub 336 n n S O3 SO4 sing 337 n n S O4 SO4 sing 338 n n # _atom_sites.entry_id 4PYQ _atom_sites.fract_transf_matrix[1][1] 0.007977 _atom_sites.fract_transf_matrix[1][2] 0.004605 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009211 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2X1 A 1 301 300 2X1 L0R . D 3 ACT A 1 302 301 ACT ACT . E 4 NA A 1 303 302 NA NA . F 5 SO4 A 1 304 304 SO4 SO4 . G 5 SO4 A 1 305 305 SO4 SO4 . H 4 NA B 1 301 303 NA NA . I 2 2X1 B 1 302 300 2X1 L0R . J 3 ACT B 1 303 301 ACT ACT . K 6 CL B 1 304 302 CL CL . L 5 SO4 B 1 305 304 SO4 SO4 . M 5 SO4 B 1 306 303 SO4 SO4 . N 7 HOH A 1 401 2 HOH HOH . N 7 HOH A 2 402 3 HOH HOH . N 7 HOH A 3 403 5 HOH HOH . N 7 HOH A 4 404 6 HOH HOH . N 7 HOH A 5 405 7 HOH HOH . N 7 HOH A 6 406 8 HOH HOH . N 7 HOH A 7 407 9 HOH HOH . N 7 HOH A 8 408 10 HOH HOH . N 7 HOH A 9 409 11 HOH HOH . N 7 HOH A 10 410 12 HOH HOH . N 7 HOH A 11 411 13 HOH HOH . N 7 HOH A 12 412 14 HOH HOH . N 7 HOH A 13 413 15 HOH HOH . N 7 HOH A 14 414 16 HOH HOH . N 7 HOH A 15 415 17 HOH HOH . N 7 HOH A 16 416 416 HOH HOH . N 7 HOH A 17 417 20 HOH HOH . N 7 HOH A 18 418 21 HOH HOH . N 7 HOH A 19 419 22 HOH HOH . N 7 HOH A 20 420 23 HOH HOH . N 7 HOH A 21 421 24 HOH HOH . N 7 HOH A 22 422 25 HOH HOH . N 7 HOH A 23 423 27 HOH HOH . N 7 HOH A 24 424 28 HOH HOH . N 7 HOH A 25 425 29 HOH HOH . N 7 HOH A 26 426 30 HOH HOH . N 7 HOH A 27 427 31 HOH HOH . N 7 HOH A 28 428 32 HOH HOH . N 7 HOH A 29 429 33 HOH HOH . N 7 HOH A 30 430 34 HOH HOH . N 7 HOH A 31 431 35 HOH HOH . N 7 HOH A 32 432 36 HOH HOH . N 7 HOH A 33 433 37 HOH HOH . N 7 HOH A 34 434 38 HOH HOH . N 7 HOH A 35 435 39 HOH HOH . N 7 HOH A 36 436 41 HOH HOH . N 7 HOH A 37 437 42 HOH HOH . N 7 HOH A 38 438 43 HOH HOH . N 7 HOH A 39 439 44 HOH HOH . N 7 HOH A 40 440 45 HOH HOH . N 7 HOH A 41 441 46 HOH HOH . N 7 HOH A 42 442 48 HOH HOH . N 7 HOH A 43 443 49 HOH HOH . N 7 HOH A 44 444 50 HOH HOH . N 7 HOH A 45 445 51 HOH HOH . N 7 HOH A 46 446 52 HOH HOH . N 7 HOH A 47 447 53 HOH HOH . N 7 HOH A 48 448 54 HOH HOH . N 7 HOH A 49 449 55 HOH HOH . N 7 HOH A 50 450 56 HOH HOH . N 7 HOH A 51 451 57 HOH HOH . N 7 HOH A 52 452 58 HOH HOH . N 7 HOH A 53 453 59 HOH HOH . N 7 HOH A 54 454 60 HOH HOH . N 7 HOH A 55 455 61 HOH HOH . N 7 HOH A 56 456 62 HOH HOH . N 7 HOH A 57 457 63 HOH HOH . N 7 HOH A 58 458 64 HOH HOH . N 7 HOH A 59 459 65 HOH HOH . N 7 HOH A 60 460 66 HOH HOH . N 7 HOH A 61 461 67 HOH HOH . N 7 HOH A 62 462 68 HOH HOH . N 7 HOH A 63 463 69 HOH HOH . N 7 HOH A 64 464 70 HOH HOH . N 7 HOH A 65 465 71 HOH HOH . N 7 HOH A 66 466 73 HOH HOH . N 7 HOH A 67 467 74 HOH HOH . N 7 HOH A 68 468 78 HOH HOH . N 7 HOH A 69 469 81 HOH HOH . N 7 HOH A 70 470 84 HOH HOH . N 7 HOH A 71 471 85 HOH HOH . N 7 HOH A 72 472 86 HOH HOH . N 7 HOH A 73 473 87 HOH HOH . N 7 HOH A 74 474 88 HOH HOH . N 7 HOH A 75 475 89 HOH HOH . N 7 HOH A 76 476 90 HOH HOH . N 7 HOH A 77 477 91 HOH HOH . N 7 HOH A 78 478 92 HOH HOH . N 7 HOH A 79 479 94 HOH HOH . N 7 HOH A 80 480 95 HOH HOH . N 7 HOH A 81 481 96 HOH HOH . N 7 HOH A 82 482 97 HOH HOH . N 7 HOH A 83 483 98 HOH HOH . N 7 HOH A 84 484 99 HOH HOH . N 7 HOH A 85 485 106 HOH HOH . N 7 HOH A 86 486 107 HOH HOH . N 7 HOH A 87 487 116 HOH HOH . N 7 HOH A 88 488 117 HOH HOH . N 7 HOH A 89 489 118 HOH HOH . N 7 HOH A 90 490 145 HOH HOH . N 7 HOH A 91 491 188 HOH HOH . N 7 HOH A 92 492 189 HOH HOH . N 7 HOH A 93 493 190 HOH HOH . N 7 HOH A 94 494 191 HOH HOH . N 7 HOH A 95 495 192 HOH HOH . N 7 HOH A 96 496 193 HOH HOH . N 7 HOH A 97 497 194 HOH HOH . N 7 HOH A 98 498 195 HOH HOH . N 7 HOH A 99 499 196 HOH HOH . N 7 HOH A 100 500 197 HOH HOH . N 7 HOH A 101 501 201 HOH HOH . N 7 HOH A 102 502 202 HOH HOH . N 7 HOH A 103 503 505 HOH HOH . N 7 HOH A 104 504 204 HOH HOH . N 7 HOH A 105 505 205 HOH HOH . N 7 HOH A 106 506 206 HOH HOH . N 7 HOH A 107 507 207 HOH HOH . N 7 HOH A 108 508 208 HOH HOH . N 7 HOH A 109 509 209 HOH HOH . N 7 HOH A 110 510 47 HOH HOH . O 7 HOH B 1 401 1 HOH HOH . O 7 HOH B 2 402 4 HOH HOH . O 7 HOH B 3 403 19 HOH HOH . O 7 HOH B 4 404 75 HOH HOH . O 7 HOH B 5 405 76 HOH HOH . O 7 HOH B 6 406 77 HOH HOH . O 7 HOH B 7 407 79 HOH HOH . O 7 HOH B 8 408 80 HOH HOH . O 7 HOH B 9 409 82 HOH HOH . O 7 HOH B 10 410 83 HOH HOH . O 7 HOH B 11 411 93 HOH HOH . O 7 HOH B 12 412 100 HOH HOH . O 7 HOH B 13 413 101 HOH HOH . O 7 HOH B 14 414 102 HOH HOH . O 7 HOH B 15 415 103 HOH HOH . O 7 HOH B 16 416 104 HOH HOH . O 7 HOH B 17 417 105 HOH HOH . O 7 HOH B 18 418 108 HOH HOH . O 7 HOH B 19 419 109 HOH HOH . O 7 HOH B 20 420 110 HOH HOH . O 7 HOH B 21 421 111 HOH HOH . O 7 HOH B 22 422 112 HOH HOH . O 7 HOH B 23 423 113 HOH HOH . O 7 HOH B 24 424 114 HOH HOH . O 7 HOH B 25 425 115 HOH HOH . O 7 HOH B 26 426 119 HOH HOH . O 7 HOH B 27 427 120 HOH HOH . O 7 HOH B 28 428 121 HOH HOH . O 7 HOH B 29 429 122 HOH HOH . O 7 HOH B 30 430 123 HOH HOH . O 7 HOH B 31 431 124 HOH HOH . O 7 HOH B 32 432 125 HOH HOH . O 7 HOH B 33 433 126 HOH HOH . O 7 HOH B 34 434 127 HOH HOH . O 7 HOH B 35 435 128 HOH HOH . O 7 HOH B 36 436 129 HOH HOH . O 7 HOH B 37 437 130 HOH HOH . O 7 HOH B 38 438 131 HOH HOH . O 7 HOH B 39 439 132 HOH HOH . O 7 HOH B 40 440 133 HOH HOH . O 7 HOH B 41 441 134 HOH HOH . O 7 HOH B 42 442 135 HOH HOH . O 7 HOH B 43 443 136 HOH HOH . O 7 HOH B 44 444 137 HOH HOH . O 7 HOH B 45 445 138 HOH HOH . O 7 HOH B 46 446 139 HOH HOH . O 7 HOH B 47 447 140 HOH HOH . O 7 HOH B 48 448 141 HOH HOH . O 7 HOH B 49 449 142 HOH HOH . O 7 HOH B 50 450 143 HOH HOH . O 7 HOH B 51 451 144 HOH HOH . O 7 HOH B 52 452 146 HOH HOH . O 7 HOH B 53 453 147 HOH HOH . O 7 HOH B 54 454 148 HOH HOH . O 7 HOH B 55 455 149 HOH HOH . O 7 HOH B 56 456 150 HOH HOH . O 7 HOH B 57 457 151 HOH HOH . O 7 HOH B 58 458 152 HOH HOH . O 7 HOH B 59 459 153 HOH HOH . O 7 HOH B 60 460 154 HOH HOH . O 7 HOH B 61 461 155 HOH HOH . O 7 HOH B 62 462 156 HOH HOH . O 7 HOH B 63 463 157 HOH HOH . O 7 HOH B 64 464 158 HOH HOH . O 7 HOH B 65 465 159 HOH HOH . O 7 HOH B 66 466 160 HOH HOH . O 7 HOH B 67 467 161 HOH HOH . O 7 HOH B 68 468 162 HOH HOH . O 7 HOH B 69 469 163 HOH HOH . O 7 HOH B 70 470 164 HOH HOH . O 7 HOH B 71 471 165 HOH HOH . O 7 HOH B 72 472 166 HOH HOH . O 7 HOH B 73 473 167 HOH HOH . O 7 HOH B 74 474 169 HOH HOH . O 7 HOH B 75 475 170 HOH HOH . O 7 HOH B 76 476 171 HOH HOH . O 7 HOH B 77 477 172 HOH HOH . O 7 HOH B 78 478 173 HOH HOH . O 7 HOH B 79 479 174 HOH HOH . O 7 HOH B 80 480 175 HOH HOH . O 7 HOH B 81 481 176 HOH HOH . O 7 HOH B 82 482 177 HOH HOH . O 7 HOH B 83 483 178 HOH HOH . O 7 HOH B 84 484 179 HOH HOH . O 7 HOH B 85 485 180 HOH HOH . O 7 HOH B 86 486 181 HOH HOH . O 7 HOH B 87 487 182 HOH HOH . O 7 HOH B 88 488 183 HOH HOH . O 7 HOH B 89 489 184 HOH HOH . O 7 HOH B 90 490 185 HOH HOH . O 7 HOH B 91 491 186 HOH HOH . O 7 HOH B 92 492 187 HOH HOH . O 7 HOH B 93 493 496 HOH HOH . O 7 HOH B 94 494 199 HOH HOH . O 7 HOH B 95 495 200 HOH HOH . O 7 HOH B 96 496 210 HOH HOH . O 7 HOH B 97 497 211 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . M 5 39.331 -3.336 2.801 1 77.6 ? S SO4 306 B 1 HETATM 2 O O1 SO4 . . . M 5 39.274 -4.79 2.892 1 79.27 ? O1 SO4 306 B 1 HETATM 3 O O2 SO4 . . . M 5 39.071 -2.907 1.428 1 76.41 -1 O2 SO4 306 B 1 HETATM 4 O O3 SO4 . . . M 5 40.674 -2.898 3.172 1 80.39 ? O3 SO4 306 B 1 HETATM 5 O O4 SO4 . . . M 5 38.348 -2.767 3.719 1 75.69 ? O4 SO4 306 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #