data_4Q0E
#
_model_server_result.job_id            0DUdoKjFgf1lPsLghuDJHQ 
_model_server_result.datetime_utc      '2024-11-05 05:39:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4q0e 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":603}' 
#
_entry.id    4Q0E 
#
_exptl.entry_id    4Q0E 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              413.384 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'N-{4-[(2-amino-4-hydroxy-7H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzoyl}-L-glutamic acid' 
_entity.pdbx_number_of_molecules    10 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.56 
_cell.angle_gamma         90 
_cell.entry_id            4Q0E 
_cell.length_a            213.629 
_cell.length_b            115.54 
_cell.length_c            217.973 
_cell.Z_PDB               20 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4Q0E 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,F,G,H,I,N,O,P,Q,Z,BA 1 1 
B,D,J,K,L,M,R,S,T,U,AA,CA 2 1 
E,V,W,X,Y,DA 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 I N N 
? 4 L N N 
? 4 M N N 
? 4 P N N 
? 4 Q N N 
? 4 T N N 
? 4 U N N 
? 4 X N N 
? 4 Y N N 
#
_chem_comp.formula           'C19 H19 N5 O6' 
_chem_comp.formula_weight    413.384 
_chem_comp.id                2XB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'N-{4-[(2-amino-4-hydroxy-7H-pyrrolo[2,3-d]pyrimidin-5-yl)methyl]benzoyl}-L-glutamic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OT1 CT5 2XB doub 1 n n 
CT5 CT1 2XB sing 2 n n 
CT5 OXT 2XB sing 3 n n 
NAA CAW 2XB sing 4 n n 
CT1 CT2 2XB sing 5 n n 
CT1 NT1 2XB sing 6 n n 
CT2 CT3 2XB sing 7 n n 
CAW NAS 2XB sing 8 n y 
CAW NAP 2XB doub 9 n y 
OAD CAV 2XB doub 10 n n 
NAS CBA 2XB doub 11 n y 
OE2 CT4 2XB doub 12 n n 
NT1 CAV 2XB sing 13 n n 
CAV CAY 2XB sing 14 n n 
CT3 CT4 2XB sing 15 n n 
NAP CBB 2XB sing 16 n y 
CT4 OE1 2XB sing 17 n n 
CAJ CAY 2XB doub 18 n y 
CAJ CAH 2XB sing 19 n y 
CBA OAE 2XB sing 20 n n 
CBA CBC 2XB sing 21 n y 
CAY CAK 2XB sing 22 n y 
CBB CBC 2XB doub 23 n y 
CBB NAR 2XB sing 24 n y 
CAH CAX 2XB doub 25 n y 
CBC CAZ 2XB sing 26 n y 
CAK CAI 2XB doub 27 n y 
NAR CAL 2XB sing 28 n y 
CAX CAI 2XB sing 29 n y 
CAX CAO 2XB sing 30 n n 
CAZ CAL 2XB doub 31 n y 
CAZ CAO 2XB sing 32 n n 
OE1 H1 2XB sing 33 n n 
CT3 H2 2XB sing 34 n n 
CT2 H3 2XB sing 35 n n 
CT1 H4 2XB sing 36 n n 
OXT H5 2XB sing 37 n n 
NT1 H6 2XB sing 38 n n 
CAJ H7 2XB sing 39 n n 
CAH H8 2XB sing 40 n n 
CAK H9 2XB sing 41 n n 
CAI H10 2XB sing 42 n n 
CAO H11 2XB sing 43 n n 
CAO H12 2XB sing 44 n n 
NAA H14 2XB sing 45 n n 
NAA H15 2XB sing 46 n n 
NAR H16 2XB sing 47 n n 
CAL H17 2XB sing 48 n n 
CT3 H18 2XB sing 49 n n 
CT2 H19 2XB sing 50 n n 
OAE H20 2XB sing 51 n n 
#
_atom_sites.entry_id                     4Q0E 
_atom_sites.fract_transf_matrix[1][1]    0.004681 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000373 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008655 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004602 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 2 NDP A 1 601 207 NDP NDP . 
G 3 UFP A 1 602 1 UFP UFP . 
H 4 2XB A 1 603 1 2XB 2XB . 
I 4 2XB A 1 604 161 2XB 2XB . 
J 2 NDP B 1 601 207 NDP NDP . 
K 3 UFP B 1 602 1 UFP UFP . 
L 4 2XB B 1 603 1 2XB 2XB . 
M 4 2XB B 1 604 161 2XB 2XB . 
N 2 NDP C 1 601 207 NDP NDP . 
O 3 UFP C 1 602 1 UFP UFP . 
P 4 2XB C 1 603 1 2XB 2XB . 
Q 4 2XB C 1 604 161 2XB 2XB . 
R 2 NDP D 1 601 207 NDP NDP . 
S 3 UFP D 1 602 1 UFP UFP . 
T 4 2XB D 1 603 1 2XB 2XB . 
U 4 2XB D 1 604 161 2XB 2XB . 
V 2 NDP E 1 601 207 NDP NDP . 
W 3 UFP E 1 602 1 UFP UFP . 
X 4 2XB E 1 603 1 2XB 2XB . 
Y 4 2XB E 1 604 161 2XB 2XB . 
Z 5 HOH A 1 701 1 HOH HOH . 
Z 5 HOH A 2 702 7 HOH HOH . 
Z 5 HOH A 3 703 8 HOH HOH . 
Z 5 HOH A 4 704 9 HOH HOH . 
Z 5 HOH A 5 705 11 HOH HOH . 
Z 5 HOH A 6 706 12 HOH HOH . 
Z 5 HOH A 7 707 14 HOH HOH . 
Z 5 HOH A 8 708 16 HOH HOH . 
AA 5 HOH B 1 701 3 HOH HOH . 
AA 5 HOH B 2 702 18 HOH HOH . 
BA 5 HOH C 1 701 2 HOH HOH . 
BA 5 HOH C 2 702 4 HOH HOH . 
BA 5 HOH C 3 703 6 HOH HOH . 
BA 5 HOH C 4 704 10 HOH HOH . 
BA 5 HOH C 5 705 13 HOH HOH . 
BA 5 HOH C 6 706 15 HOH HOH . 
CA 5 HOH D 1 701 5 HOH HOH . 
DA 5 HOH E 1 701 17 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OE1 2XB . . . X 4 142.664 -146.679 671.229 1 95.46 ? OE1 2XB 603 E 1 
HETATM 2 C CT4 2XB . . . X 4 142.244 -145.53 670.919 1 96.93 ? CT4 2XB 603 E 1 
HETATM 3 O OE2 2XB . . . X 4 141.311 -144.995 671.577 1 93.25 ? OE2 2XB 603 E 1 
HETATM 4 C CT3 2XB . . . X 4 142.852 -144.796 669.773 1 99.38 ? CT3 2XB 603 E 1 
HETATM 5 C CT2 2XB . . . X 4 141.967 -144.214 668.723 1 102.27 ? CT2 2XB 603 E 1 
HETATM 6 C CT1 2XB . . . X 4 142.579 -143.541 667.543 1 109.82 ? CT1 2XB 603 E 1 
HETATM 7 C CT5 2XB . . . X 4 142.745 -142.058 667.553 1 101.67 ? CT5 2XB 603 E 1 
HETATM 8 O OT1 2XB . . . X 4 141.932 -141.329 666.925 1 99.16 ? OT1 2XB 603 E 1 
HETATM 9 O OXT 2XB . . . X 4 143.7 -141.535 668.187 1 99.89 ? OXT 2XB 603 E 1 
HETATM 10 N NT1 2XB . . . X 4 143.37 -144.315 666.64 1 115.63 ? NT1 2XB 603 E 1 
HETATM 11 C CAV 2XB . . . X 4 142.82 -145.446 665.96 1 109.37 ? CAV 2XB 603 E 1 
HETATM 12 O OAD 2XB . . . X 4 141.66 -145.778 666.145 1 113.24 ? OAD 2XB 603 E 1 
HETATM 13 C CAY 2XB . . . X 4 143.685 -146.218 665.021 1 100.44 ? CAY 2XB 603 E 1 
HETATM 14 C CAJ 2XB . . . X 4 143.212 -147.383 664.438 1 100.55 ? CAJ 2XB 603 E 1 
HETATM 15 C CAH 2XB . . . X 4 144.032 -148.087 663.569 1 94.95 ? CAH 2XB 603 E 1 
HETATM 16 C CAK 2XB . . . X 4 144.964 -145.751 664.739 1 96.1 ? CAK 2XB 603 E 1 
HETATM 17 C CAI 2XB . . . X 4 145.781 -146.456 663.864 1 94.15 ? CAI 2XB 603 E 1 
HETATM 18 C CAX 2XB . . . X 4 145.306 -147.62 663.284 1 95.02 ? CAX 2XB 603 E 1 
HETATM 19 C CAO 2XB . . . X 4 146.18 -148.385 662.344 1 95.88 ? CAO 2XB 603 E 1 
HETATM 20 C CAZ 2XB . . . X 4 145.327 -149.049 661.314 1 91.68 ? CAZ 2XB 603 E 1 
HETATM 21 C CBC 2XB . . . X 4 144.586 -148.382 660.299 1 92.52 ? CBC 2XB 603 E 1 
HETATM 22 C CBA 2XB . . . X 4 144.403 -147.013 659.919 1 91.38 ? CBA 2XB 603 E 1 
HETATM 23 O OAE 2XB . . . X 4 145.031 -146.006 660.613 1 93.74 ? OAE 2XB 603 E 1 
HETATM 24 N NAS 2XB . . . X 4 143.582 -146.703 658.837 1 87.9 ? NAS 2XB 603 E 1 
HETATM 25 C CAW 2XB . . . X 4 142.917 -147.768 658.104 1 92.99 ? CAW 2XB 603 E 1 
HETATM 26 N NAA 2XB . . . X 4 142.072 -147.471 656.991 1 101.74 ? NAA 2XB 603 E 1 
HETATM 27 N NAP 2XB . . . X 4 143.127 -149.094 658.512 1 95.4 ? NAP 2XB 603 E 1 
HETATM 28 C CBB 2XB . . . X 4 143.942 -149.382 659.583 1 93.41 ? CBB 2XB 603 E 1 
HETATM 29 N NAR 2XB . . . X 4 144.278 -150.633 660.144 1 99.88 ? NAR 2XB 603 E 1 
HETATM 30 C CAL 2XB . . . X 4 145.138 -150.416 661.218 1 93.58 ? CAL 2XB 603 E 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           246 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           30 
#