data_4Q1B # _model_server_result.job_id gD0pJvNrVD_x6nPxSOXI7A _model_server_result.datetime_utc '2024-11-22 20:16:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4q1b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 4Q1B # _exptl.entry_id 4Q1B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 494.654 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(2-(3-(4-(((4,6-diaminopyrimidin-2-yl)thio)methyl)-5-propylthiazol-2-yl)phenoxy)ethyl)methanesulfonamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Q1B _cell.length_a 68.968 _cell.length_b 68.968 _cell.length_c 121.944 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Q1B _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C20 H26 N6 O3 S3' _chem_comp.formula_weight 494.654 _chem_comp.id 2Y0 _chem_comp.mon_nstd_flag . _chem_comp.name N-(2-(3-(4-(((4,6-diaminopyrimidin-2-yl)thio)methyl)-5-propylthiazol-2-yl)phenoxy)ethyl)methanesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms N-{2-[3-(4-{[(4,6-diaminopyrimidin-2-yl)sulfanyl]methyl}-5-propyl-1,3-thiazol-2-yl)phenoxy]ethyl}methanesulfonamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA CAL 2Y0 sing 1 n n CAL CAO 2Y0 sing 2 n n CAO CBD 2Y0 sing 3 n n SAW CBD 2Y0 sing 4 n y SAW CBE 2Y0 sing 5 n y CBD CBC 2Y0 doub 6 n y CAI CAG 2Y0 doub 7 n y CAI CBA 2Y0 sing 8 n y NAC C6 2Y0 sing 9 n n CAG CAH 2Y0 sing 10 n y C6 N1 2Y0 doub 11 n y C6 C5 2Y0 sing 12 n y N1 C2 2Y0 sing 13 n y C5 C4 2Y0 doub 14 n y CBE CBA 2Y0 sing 15 n n CBE NAS 2Y0 doub 16 n y C2 SAV 2Y0 sing 17 n n C2 N3 2Y0 doub 18 n y C4 N3 2Y0 sing 19 n y C4 NAD 2Y0 sing 20 n n SAV CAP 2Y0 sing 21 n n CBA CAK 2Y0 doub 22 n y CBC NAS 2Y0 sing 23 n y CBC CAP 2Y0 sing 24 n n CAH CAZ 2Y0 doub 25 n y CAK CAZ 2Y0 sing 26 n y CAZ OAU 2Y0 sing 27 n n OAU CAN 2Y0 sing 28 n n CAN CAM 2Y0 sing 29 n n CAM NAT 2Y0 sing 30 n n NAT SBF 2Y0 sing 31 n n CAB SBF 2Y0 sing 32 n n SBF OAF 2Y0 doub 33 n n SBF OAE 2Y0 doub 34 n n CAB H1 2Y0 sing 35 n n CAB H2 2Y0 sing 36 n n CAB H3 2Y0 sing 37 n n NAT H4 2Y0 sing 38 n n CAM H5 2Y0 sing 39 n n CAM H6 2Y0 sing 40 n n CAN H7 2Y0 sing 41 n n CAN H8 2Y0 sing 42 n n CAK H9 2Y0 sing 43 n n CAH H10 2Y0 sing 44 n n CAG H11 2Y0 sing 45 n n CAI H12 2Y0 sing 46 n n CAO H13 2Y0 sing 47 n n CAO H14 2Y0 sing 48 n n CAL H15 2Y0 sing 49 n n CAL H16 2Y0 sing 50 n n CAA H17 2Y0 sing 51 n n CAA H18 2Y0 sing 52 n n CAA H19 2Y0 sing 53 n n CAP H20 2Y0 sing 54 n n CAP H21 2Y0 sing 55 n n NAC H22 2Y0 sing 56 n n NAC H23 2Y0 sing 57 n n C5 H24 2Y0 sing 58 n n NAD H25 2Y0 sing 59 n n NAD H26 2Y0 sing 60 n n # _atom_sites.entry_id 4Q1B _atom_sites.fract_transf_matrix[1][1] 0.014499 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014499 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0082 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2Y0 A 1 301 301 2Y0 DRG . D 3 UDP A 1 302 401 UDP UDP . E 2 2Y0 B 1 301 301 2Y0 DRG . F 3 UDP B 1 302 401 UDP UDP . G 4 HOH A 1 401 2 HOH HOH . G 4 HOH A 2 402 3 HOH HOH . G 4 HOH A 3 403 6 HOH HOH . G 4 HOH A 4 404 10 HOH HOH . G 4 HOH A 5 405 18 HOH HOH . G 4 HOH A 6 406 19 HOH HOH . G 4 HOH A 7 407 23 HOH HOH . G 4 HOH A 8 408 25 HOH HOH . G 4 HOH A 9 409 26 HOH HOH . G 4 HOH A 10 410 27 HOH HOH . G 4 HOH A 11 411 31 HOH HOH . G 4 HOH A 12 412 32 HOH HOH . G 4 HOH A 13 413 34 HOH HOH . G 4 HOH A 14 414 35 HOH HOH . G 4 HOH A 15 415 39 HOH HOH . G 4 HOH A 16 416 40 HOH HOH . G 4 HOH A 17 417 43 HOH HOH . G 4 HOH A 18 418 50 HOH HOH . G 4 HOH A 19 419 52 HOH HOH . G 4 HOH A 20 420 53 HOH HOH . G 4 HOH A 21 421 55 HOH HOH . G 4 HOH A 22 422 57 HOH HOH . G 4 HOH A 23 423 60 HOH HOH . G 4 HOH A 24 424 61 HOH HOH . G 4 HOH A 25 425 62 HOH HOH . G 4 HOH A 26 426 63 HOH HOH . G 4 HOH A 27 427 64 HOH HOH . G 4 HOH A 28 428 65 HOH HOH . G 4 HOH A 29 429 66 HOH HOH . G 4 HOH A 30 430 80 HOH HOH . G 4 HOH A 31 431 81 HOH HOH . G 4 HOH A 32 432 82 HOH HOH . G 4 HOH A 33 433 83 HOH HOH . G 4 HOH A 34 434 84 HOH HOH . G 4 HOH A 35 435 85 HOH HOH . G 4 HOH A 36 436 86 HOH HOH . G 4 HOH A 37 437 87 HOH HOH . G 4 HOH A 38 438 88 HOH HOH . G 4 HOH A 39 439 90 HOH HOH . H 4 HOH B 1 401 1 HOH HOH . H 4 HOH B 2 402 4 HOH HOH . H 4 HOH B 3 403 5 HOH HOH . H 4 HOH B 4 404 7 HOH HOH . H 4 HOH B 5 405 8 HOH HOH . H 4 HOH B 6 406 9 HOH HOH . H 4 HOH B 7 407 11 HOH HOH . H 4 HOH B 8 408 12 HOH HOH . H 4 HOH B 9 409 13 HOH HOH . H 4 HOH B 10 410 14 HOH HOH . H 4 HOH B 11 411 15 HOH HOH . H 4 HOH B 12 412 16 HOH HOH . H 4 HOH B 13 413 17 HOH HOH . H 4 HOH B 14 414 20 HOH HOH . H 4 HOH B 15 415 21 HOH HOH . H 4 HOH B 16 416 22 HOH HOH . H 4 HOH B 17 417 24 HOH HOH . H 4 HOH B 18 418 28 HOH HOH . H 4 HOH B 19 419 29 HOH HOH . H 4 HOH B 20 420 30 HOH HOH . H 4 HOH B 21 421 33 HOH HOH . H 4 HOH B 22 422 36 HOH HOH . H 4 HOH B 23 423 37 HOH HOH . H 4 HOH B 24 424 38 HOH HOH . H 4 HOH B 25 425 41 HOH HOH . H 4 HOH B 26 426 42 HOH HOH . H 4 HOH B 27 427 44 HOH HOH . H 4 HOH B 28 428 45 HOH HOH . H 4 HOH B 29 429 46 HOH HOH . H 4 HOH B 30 430 47 HOH HOH . H 4 HOH B 31 431 48 HOH HOH . H 4 HOH B 32 432 49 HOH HOH . H 4 HOH B 33 433 51 HOH HOH . H 4 HOH B 34 434 54 HOH HOH . H 4 HOH B 35 435 56 HOH HOH . H 4 HOH B 36 436 58 HOH HOH . H 4 HOH B 37 437 59 HOH HOH . H 4 HOH B 38 438 67 HOH HOH . H 4 HOH B 39 439 68 HOH HOH . H 4 HOH B 40 440 69 HOH HOH . H 4 HOH B 41 441 70 HOH HOH . H 4 HOH B 42 442 71 HOH HOH . H 4 HOH B 43 443 72 HOH HOH . H 4 HOH B 44 444 73 HOH HOH . H 4 HOH B 45 445 74 HOH HOH . H 4 HOH B 46 446 75 HOH HOH . H 4 HOH B 47 447 76 HOH HOH . H 4 HOH B 48 448 77 HOH HOH . H 4 HOH B 49 449 78 HOH HOH . H 4 HOH B 50 450 79 HOH HOH . H 4 HOH B 51 451 89 HOH HOH . H 4 HOH B 52 452 91 HOH HOH . H 4 HOH B 53 453 92 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAB 2Y0 . . . E 2 -38.476 -10.081 -27.294 1 90.33 ? CAB 2Y0 301 B 1 HETATM 2 S SBF 2Y0 . . . E 2 -38.37 -8.316 -27.542 1 94.63 ? SBF 2Y0 301 B 1 HETATM 3 O OAE 2Y0 . . . E 2 -39.656 -7.639 -27.06 1 89.35 ? OAE 2Y0 301 B 1 HETATM 4 O OAF 2Y0 . . . E 2 -38.186 -8.023 -29.035 1 88.66 ? OAF 2Y0 301 B 1 HETATM 5 N NAT 2Y0 . . . E 2 -36.985 -7.68 -26.65 1 85.06 ? NAT 2Y0 301 B 1 HETATM 6 C CAM 2Y0 . . . E 2 -37.241 -7.542 -25.206 1 69.04 ? CAM 2Y0 301 B 1 HETATM 7 C CAN 2Y0 . . . E 2 -36.088 -8.128 -24.385 1 65.23 ? CAN 2Y0 301 B 1 HETATM 8 O OAU 2Y0 . . . E 2 -35.965 -9.537 -24.648 1 58.11 ? OAU 2Y0 301 B 1 HETATM 9 C CAZ 2Y0 . . . E 2 -35.783 -10.357 -23.558 1 54.94 ? CAZ 2Y0 301 B 1 HETATM 10 C CAK 2Y0 . . . E 2 -34.557 -11.013 -23.391 1 49.32 ? CAK 2Y0 301 B 1 HETATM 11 C CAH 2Y0 . . . E 2 -36.807 -10.579 -22.635 1 54.17 ? CAH 2Y0 301 B 1 HETATM 12 C CAG 2Y0 . . . E 2 -36.602 -11.439 -21.55 1 55.31 ? CAG 2Y0 301 B 1 HETATM 13 C CAI 2Y0 . . . E 2 -35.365 -12.084 -21.398 1 54.97 ? CAI 2Y0 301 B 1 HETATM 14 C CBA 2Y0 . . . E 2 -34.341 -11.885 -22.326 1 51.01 ? CBA 2Y0 301 B 1 HETATM 15 C CBE 2Y0 . . . E 2 -33.134 -12.464 -22.213 1 50.76 ? CBE 2Y0 301 B 1 HETATM 16 N NAS 2Y0 . . . E 2 -32.123 -12.15 -23.025 1 52.28 ? NAS 2Y0 301 B 1 HETATM 17 S SAW 2Y0 . . . E 2 -32.597 -13.6 -21.087 1 55.67 ? SAW 2Y0 301 B 1 HETATM 18 C CBD 2Y0 . . . E 2 -31.056 -13.648 -21.717 1 55.14 ? CBD 2Y0 301 B 1 HETATM 19 C CAO 2Y0 . . . E 2 -29.916 -14.525 -21.177 1 54.74 ? CAO 2Y0 301 B 1 HETATM 20 C CAL 2Y0 . . . E 2 -30.188 -15.995 -21.513 1 62.39 ? CAL 2Y0 301 B 1 HETATM 21 C CAA 2Y0 . . . E 2 -30.186 -16.24 -23.043 1 59.2 ? CAA 2Y0 301 B 1 HETATM 22 C CBC 2Y0 . . . E 2 -30.98 -12.793 -22.75 1 56.76 ? CBC 2Y0 301 B 1 HETATM 23 C CAP 2Y0 . . . E 2 -29.721 -12.539 -23.602 1 54.36 ? CAP 2Y0 301 B 1 HETATM 24 S SAV 2Y0 . . . E 2 -28.951 -10.89 -23.34 1 54.57 ? SAV 2Y0 301 B 1 HETATM 25 C C2 2Y0 . . . E 2 -27.37 -11.208 -22.912 1 48.78 ? C2 2Y0 301 B 1 HETATM 26 N N3 2Y0 . . . E 2 -26.894 -12.462 -22.833 1 45.69 ? N3 2Y0 301 B 1 HETATM 27 N N1 2Y0 . . . E 2 -26.592 -10.148 -22.656 1 43.42 ? N1 2Y0 301 B 1 HETATM 28 C C6 2Y0 . . . E 2 -25.312 -10.292 -22.309 1 43.95 ? C6 2Y0 301 B 1 HETATM 29 N NAC 2Y0 . . . E 2 -24.605 -9.174 -22.062 1 36.1 ? NAC 2Y0 301 B 1 HETATM 30 C C5 2Y0 . . . E 2 -24.779 -11.594 -22.204 1 41.2 ? C5 2Y0 301 B 1 HETATM 31 C C4 2Y0 . . . E 2 -25.633 -12.668 -22.481 1 44.23 ? C4 2Y0 301 B 1 HETATM 32 N NAD 2Y0 . . . E 2 -25.237 -13.922 -22.419 1 46.87 ? NAD 2Y0 301 B 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #