data_4Q1I # _model_server_result.job_id -wl3Xx3ex38zFshqO9ZlsQ _model_server_result.datetime_utc '2024-12-09 07:14:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4q1i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 4Q1I # _exptl.entry_id 4Q1I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Q1I _cell.length_a 81.91 _cell.length_b 85.88 _cell.length_c 126.8 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Q1I _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4Q1I _atom_sites.fract_transf_matrix[1][1] 0.012209 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007886 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 GOL A 1 301 1 GOL GOL . E 2 GOL A 1 302 1 GOL GOL . F 2 GOL A 1 303 1 GOL GOL . G 2 GOL A 1 304 1 GOL GOL . H 2 GOL B 1 301 1 GOL GOL . I 2 GOL C 1 301 1 GOL GOL . J 3 HOH A 1 401 3 HOH HOH . J 3 HOH A 2 402 6 HOH HOH . J 3 HOH A 3 403 8 HOH HOH . J 3 HOH A 4 404 12 HOH HOH . J 3 HOH A 5 405 21 HOH HOH . J 3 HOH A 6 406 23 HOH HOH . J 3 HOH A 7 407 31 HOH HOH . J 3 HOH A 8 408 35 HOH HOH . J 3 HOH A 9 409 37 HOH HOH . J 3 HOH A 10 410 39 HOH HOH . J 3 HOH A 11 411 42 HOH HOH . J 3 HOH A 12 412 43 HOH HOH . J 3 HOH A 13 413 48 HOH HOH . J 3 HOH A 14 414 50 HOH HOH . J 3 HOH A 15 415 52 HOH HOH . J 3 HOH A 16 416 54 HOH HOH . J 3 HOH A 17 417 74 HOH HOH . J 3 HOH A 18 418 92 HOH HOH . J 3 HOH A 19 419 99 HOH HOH . J 3 HOH A 20 420 119 HOH HOH . J 3 HOH A 21 421 123 HOH HOH . J 3 HOH A 22 422 126 HOH HOH . J 3 HOH A 23 423 145 HOH HOH . J 3 HOH A 24 424 168 HOH HOH . J 3 HOH A 25 425 170 HOH HOH . J 3 HOH A 26 426 179 HOH HOH . J 3 HOH A 27 427 180 HOH HOH . J 3 HOH A 28 428 195 HOH HOH . J 3 HOH A 29 429 199 HOH HOH . J 3 HOH A 30 430 202 HOH HOH . J 3 HOH A 31 431 203 HOH HOH . J 3 HOH A 32 432 207 HOH HOH . J 3 HOH A 33 433 211 HOH HOH . J 3 HOH A 34 434 215 HOH HOH . J 3 HOH A 35 435 231 HOH HOH . J 3 HOH A 36 436 234 HOH HOH . J 3 HOH A 37 437 235 HOH HOH . J 3 HOH A 38 438 240 HOH HOH . J 3 HOH A 39 439 242 HOH HOH . J 3 HOH A 40 440 248 HOH HOH . J 3 HOH A 41 441 249 HOH HOH . J 3 HOH A 42 442 253 HOH HOH . J 3 HOH A 43 443 255 HOH HOH . J 3 HOH A 44 444 257 HOH HOH . J 3 HOH A 45 445 269 HOH HOH . J 3 HOH A 46 446 270 HOH HOH . J 3 HOH A 47 447 279 HOH HOH . J 3 HOH A 48 448 282 HOH HOH . J 3 HOH A 49 449 288 HOH HOH . J 3 HOH A 50 450 289 HOH HOH . J 3 HOH A 51 451 290 HOH HOH . J 3 HOH A 52 452 299 HOH HOH . J 3 HOH A 53 453 310 HOH HOH . J 3 HOH A 54 454 317 HOH HOH . J 3 HOH A 55 455 321 HOH HOH . J 3 HOH A 56 456 327 HOH HOH . J 3 HOH A 57 457 331 HOH HOH . K 3 HOH B 1 401 1 HOH HOH . K 3 HOH B 2 402 2 HOH HOH . K 3 HOH B 3 403 4 HOH HOH . K 3 HOH B 4 404 5 HOH HOH . K 3 HOH B 5 405 7 HOH HOH . K 3 HOH B 6 406 10 HOH HOH . K 3 HOH B 7 407 11 HOH HOH . K 3 HOH B 8 408 15 HOH HOH . K 3 HOH B 9 409 18 HOH HOH . K 3 HOH B 10 410 19 HOH HOH . K 3 HOH B 11 411 26 HOH HOH . K 3 HOH B 12 412 27 HOH HOH . K 3 HOH B 13 413 29 HOH HOH . K 3 HOH B 14 414 32 HOH HOH . K 3 HOH B 15 415 33 HOH HOH . K 3 HOH B 16 416 36 HOH HOH . K 3 HOH B 17 417 38 HOH HOH . K 3 HOH B 18 418 40 HOH HOH . K 3 HOH B 19 419 41 HOH HOH . K 3 HOH B 20 420 44 HOH HOH . K 3 HOH B 21 421 45 HOH HOH . K 3 HOH B 22 422 46 HOH HOH . K 3 HOH B 23 423 47 HOH HOH . K 3 HOH B 24 424 49 HOH HOH . K 3 HOH B 25 425 53 HOH HOH . K 3 HOH B 26 426 59 HOH HOH . K 3 HOH B 27 427 62 HOH HOH . K 3 HOH B 28 428 70 HOH HOH . K 3 HOH B 29 429 72 HOH HOH . K 3 HOH B 30 430 73 HOH HOH . K 3 HOH B 31 431 76 HOH HOH . K 3 HOH B 32 432 77 HOH HOH . K 3 HOH B 33 433 78 HOH HOH . K 3 HOH B 34 434 84 HOH HOH . K 3 HOH B 35 435 91 HOH HOH . K 3 HOH B 36 436 96 HOH HOH . K 3 HOH B 37 437 97 HOH HOH . K 3 HOH B 38 438 98 HOH HOH . K 3 HOH B 39 439 100 HOH HOH . K 3 HOH B 40 440 105 HOH HOH . K 3 HOH B 41 441 106 HOH HOH . K 3 HOH B 42 442 111 HOH HOH . K 3 HOH B 43 443 113 HOH HOH . K 3 HOH B 44 444 114 HOH HOH . K 3 HOH B 45 445 116 HOH HOH . K 3 HOH B 46 446 120 HOH HOH . K 3 HOH B 47 447 122 HOH HOH . K 3 HOH B 48 448 128 HOH HOH . K 3 HOH B 49 449 134 HOH HOH . K 3 HOH B 50 450 137 HOH HOH . K 3 HOH B 51 451 138 HOH HOH . K 3 HOH B 52 452 140 HOH HOH . K 3 HOH B 53 453 143 HOH HOH . K 3 HOH B 54 454 146 HOH HOH . K 3 HOH B 55 455 147 HOH HOH . K 3 HOH B 56 456 148 HOH HOH . K 3 HOH B 57 457 152 HOH HOH . K 3 HOH B 58 458 153 HOH HOH . K 3 HOH B 59 459 156 HOH HOH . K 3 HOH B 60 460 158 HOH HOH . K 3 HOH B 61 461 159 HOH HOH . K 3 HOH B 62 462 162 HOH HOH . K 3 HOH B 63 463 165 HOH HOH . K 3 HOH B 64 464 174 HOH HOH . K 3 HOH B 65 465 181 HOH HOH . K 3 HOH B 66 466 186 HOH HOH . K 3 HOH B 67 467 187 HOH HOH . K 3 HOH B 68 468 191 HOH HOH . K 3 HOH B 69 469 193 HOH HOH . K 3 HOH B 70 470 196 HOH HOH . K 3 HOH B 71 471 197 HOH HOH . K 3 HOH B 72 472 208 HOH HOH . K 3 HOH B 73 473 209 HOH HOH . K 3 HOH B 74 474 213 HOH HOH . K 3 HOH B 75 475 219 HOH HOH . K 3 HOH B 76 476 224 HOH HOH . K 3 HOH B 77 477 226 HOH HOH . K 3 HOH B 78 478 227 HOH HOH . K 3 HOH B 79 479 228 HOH HOH . K 3 HOH B 80 480 241 HOH HOH . K 3 HOH B 81 481 243 HOH HOH . K 3 HOH B 82 482 252 HOH HOH . K 3 HOH B 83 483 258 HOH HOH . K 3 HOH B 84 484 259 HOH HOH . K 3 HOH B 85 485 273 HOH HOH . K 3 HOH B 86 486 275 HOH HOH . K 3 HOH B 87 487 276 HOH HOH . K 3 HOH B 88 488 285 HOH HOH . K 3 HOH B 89 489 287 HOH HOH . K 3 HOH B 90 490 293 HOH HOH . K 3 HOH B 91 491 300 HOH HOH . K 3 HOH B 92 492 301 HOH HOH . K 3 HOH B 93 493 319 HOH HOH . K 3 HOH B 94 494 323 HOH HOH . L 3 HOH C 1 401 9 HOH HOH . L 3 HOH C 2 402 13 HOH HOH . L 3 HOH C 3 403 14 HOH HOH . L 3 HOH C 4 404 16 HOH HOH . L 3 HOH C 5 405 17 HOH HOH . L 3 HOH C 6 406 20 HOH HOH . L 3 HOH C 7 407 22 HOH HOH . L 3 HOH C 8 408 24 HOH HOH . L 3 HOH C 9 409 25 HOH HOH . L 3 HOH C 10 410 28 HOH HOH . L 3 HOH C 11 411 30 HOH HOH . L 3 HOH C 12 412 34 HOH HOH . L 3 HOH C 13 413 51 HOH HOH . L 3 HOH C 14 414 56 HOH HOH . L 3 HOH C 15 415 58 HOH HOH . L 3 HOH C 16 416 60 HOH HOH . L 3 HOH C 17 417 61 HOH HOH . L 3 HOH C 18 418 63 HOH HOH . L 3 HOH C 19 419 67 HOH HOH . L 3 HOH C 20 420 71 HOH HOH . L 3 HOH C 21 421 75 HOH HOH . L 3 HOH C 22 422 79 HOH HOH . L 3 HOH C 23 423 80 HOH HOH . L 3 HOH C 24 424 86 HOH HOH . L 3 HOH C 25 425 88 HOH HOH . L 3 HOH C 26 426 90 HOH HOH . L 3 HOH C 27 427 93 HOH HOH . L 3 HOH C 28 428 95 HOH HOH . L 3 HOH C 29 429 101 HOH HOH . L 3 HOH C 30 430 107 HOH HOH . L 3 HOH C 31 431 112 HOH HOH . L 3 HOH C 32 432 115 HOH HOH . L 3 HOH C 33 433 121 HOH HOH . L 3 HOH C 34 434 127 HOH HOH . L 3 HOH C 35 435 129 HOH HOH . L 3 HOH C 36 436 130 HOH HOH . L 3 HOH C 37 437 131 HOH HOH . L 3 HOH C 38 438 132 HOH HOH . L 3 HOH C 39 439 133 HOH HOH . L 3 HOH C 40 440 135 HOH HOH . L 3 HOH C 41 441 136 HOH HOH . L 3 HOH C 42 442 141 HOH HOH . L 3 HOH C 43 443 142 HOH HOH . L 3 HOH C 44 444 150 HOH HOH . L 3 HOH C 45 445 151 HOH HOH . L 3 HOH C 46 446 154 HOH HOH . L 3 HOH C 47 447 155 HOH HOH . L 3 HOH C 48 448 167 HOH HOH . L 3 HOH C 49 449 169 HOH HOH . L 3 HOH C 50 450 175 HOH HOH . L 3 HOH C 51 451 176 HOH HOH . L 3 HOH C 52 452 184 HOH HOH . L 3 HOH C 53 453 185 HOH HOH . L 3 HOH C 54 454 188 HOH HOH . L 3 HOH C 55 455 198 HOH HOH . L 3 HOH C 56 456 200 HOH HOH . L 3 HOH C 57 457 204 HOH HOH . L 3 HOH C 58 458 205 HOH HOH . L 3 HOH C 59 459 210 HOH HOH . L 3 HOH C 60 460 220 HOH HOH . L 3 HOH C 61 461 222 HOH HOH . L 3 HOH C 62 462 223 HOH HOH . L 3 HOH C 63 463 229 HOH HOH . L 3 HOH C 64 464 233 HOH HOH . L 3 HOH C 65 465 236 HOH HOH . L 3 HOH C 66 466 244 HOH HOH . L 3 HOH C 67 467 245 HOH HOH . L 3 HOH C 68 468 250 HOH HOH . L 3 HOH C 69 469 251 HOH HOH . L 3 HOH C 70 470 263 HOH HOH . L 3 HOH C 71 471 265 HOH HOH . L 3 HOH C 72 472 267 HOH HOH . L 3 HOH C 73 473 268 HOH HOH . L 3 HOH C 74 474 286 HOH HOH . L 3 HOH C 75 475 291 HOH HOH . L 3 HOH C 76 476 294 HOH HOH . L 3 HOH C 77 477 295 HOH HOH . L 3 HOH C 78 478 305 HOH HOH . L 3 HOH C 79 479 311 HOH HOH . L 3 HOH C 80 480 313 HOH HOH . L 3 HOH C 81 481 318 HOH HOH . L 3 HOH C 82 482 329 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 10.131 -3.456 10.48 1 42.28 ? C1 GOL 301 A 1 HETATM 2 O O1 GOL . . . D 2 8.793 -3.879 10.778 1 44.4 ? O1 GOL 301 A 1 HETATM 3 C C2 GOL . . . D 2 10.877 -4.755 10.458 1 46.02 ? C2 GOL 301 A 1 HETATM 4 O O2 GOL . . . D 2 11.039 -5.176 11.791 1 45.4 ? O2 GOL 301 A 1 HETATM 5 C C3 GOL . . . D 2 12.262 -4.642 9.909 1 55.51 ? C3 GOL 301 A 1 HETATM 6 O O3 GOL . . . D 2 12.91 -5.838 10.385 1 70.4 ? O3 GOL 301 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #