data_4Q1U # _model_server_result.job_id k-1uo-i8ZllP26rhMQYhkA _model_server_result.datetime_utc '2025-02-05 07:51:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4q1u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 4Q1U # _exptl.entry_id 4Q1U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Q1U _cell.length_a 93.514 _cell.length_b 93.514 _cell.length_c 144.007 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Q1U _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 42 A CYS 42 1_555 A SG CYS 353 A CYS 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.946 ? metalc ? metalc1 A OE2 GLU 53 A GLU 53 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc2 A OD2 ASP 54 A ASP 54 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc3 A O ILE 117 A ILE 117 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc4 A OD1 ASN 168 A ASN 168 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.661 ? metalc ? metalc5 A OD1 ASP 169 A ASP 169 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.456 ? metalc ? metalc6 A OD2 ASP 169 A ASP 169 1_555 B CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc7 A OD1 ASN 224 A ASN 224 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? metalc ? metalc8 A OD2 ASP 269 A ASP 269 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc9 A OD1 ASN 270 A ASN 270 1_555 C CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc10 B CA CA . A CA 401 1_555 H O HOH . A HOH 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc11 B CA CA . A CA 401 1_555 H O HOH . A HOH 511 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? metalc ? metalc12 B CA CA . A CA 401 1_555 H O HOH . A HOH 512 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc13 C CA CA . A CA 402 1_555 E O3 PO4 . A PO4 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc14 C CA CA . A CA 402 1_555 H O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.534 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 194 n n C1B O1B LMT sing 195 n n C1B O5B LMT sing 196 n n C1B H1B LMT sing 197 n n C2B C3B LMT sing 198 n n C2B O2B LMT sing 199 n n C2B H2B LMT sing 200 n n C3B C4B LMT sing 201 n n C3B O3B LMT sing 202 n n C3B H3B LMT sing 203 n n C4B C5B LMT sing 204 n n C4B O4' LMT sing 205 n n C4B H4B LMT sing 206 n n C5B C6B LMT sing 207 n n C5B O5B LMT sing 208 n n C5B H5B LMT sing 209 n n C6B O6B LMT sing 210 n n C6B "H6'2" LMT sing 211 n n C6B "H6'1" LMT sing 212 n n O1B C4' LMT sing 213 n n O2B H2O1 LMT sing 214 n n O3B H3O1 LMT sing 215 n n O4' H4O1 LMT sing 216 n n O6B H6B LMT sing 217 n n C1' C2' LMT sing 218 n n C1' O1' LMT sing 219 n n C1' O5' LMT sing 220 n n C1' H1' LMT sing 221 n n C2' C3' LMT sing 222 n n C2' O2' LMT sing 223 n n C2' H2' LMT sing 224 n n C3' C4' LMT sing 225 n n C3' O3' LMT sing 226 n n C3' H3' LMT sing 227 n n C4' C5' LMT sing 228 n n C4' H4' LMT sing 229 n n C5' C6' LMT sing 230 n n C5' O5' LMT sing 231 n n C5' H5' LMT sing 232 n n C6' O6' LMT sing 233 n n C6' H6D LMT sing 234 n n C6' H6E LMT sing 235 n n O1' C1 LMT sing 236 n n O2' H2O2 LMT sing 237 n n O3' H3O2 LMT sing 238 n n O6' H6' LMT sing 239 n n C1 C2 LMT sing 240 n n C1 H12 LMT sing 241 n n C1 H11 LMT sing 242 n n C2 C3 LMT sing 243 n n C2 H22 LMT sing 244 n n C2 H21 LMT sing 245 n n C3 C4 LMT sing 246 n n C3 H32 LMT sing 247 n n C3 H31 LMT sing 248 n n C4 C5 LMT sing 249 n n C4 H42 LMT sing 250 n n C4 H41 LMT sing 251 n n C5 C6 LMT sing 252 n n C5 H52 LMT sing 253 n n C5 H51 LMT sing 254 n n C6 C7 LMT sing 255 n n C6 H62 LMT sing 256 n n C6 H61 LMT sing 257 n n C7 C8 LMT sing 258 n n C7 H72 LMT sing 259 n n C7 H71 LMT sing 260 n n C8 C9 LMT sing 261 n n C8 H82 LMT sing 262 n n C8 H81 LMT sing 263 n n C9 C10 LMT sing 264 n n C9 H92 LMT sing 265 n n C9 H91 LMT sing 266 n n C10 C11 LMT sing 267 n n C10 H102 LMT sing 268 n n C10 H101 LMT sing 269 n n C11 C12 LMT sing 270 n n C11 H112 LMT sing 271 n n C11 H111 LMT sing 272 n n C12 H123 LMT sing 273 n n C12 H122 LMT sing 274 n n C12 H121 LMT sing 275 n n # _atom_sites.entry_id 4Q1U _atom_sites.fract_transf_matrix[1][1] 0.010694 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010694 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006944 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 401 1356 CA CA . C 2 CA A 1 402 1357 CA CA . D 3 LMT A 1 403 1359 LMT LMT . E 4 PO4 A 1 404 1 PO4 PO4 . F 5 CL A 1 405 1 CL CL . G 6 BR A 1 406 1 BR BR . H 7 HOH A 1 501 1 HOH HOH . H 7 HOH A 2 502 3 HOH HOH . H 7 HOH A 3 503 4 HOH HOH . H 7 HOH A 4 504 5 HOH HOH . H 7 HOH A 5 505 6 HOH HOH . H 7 HOH A 6 506 7 HOH HOH . H 7 HOH A 7 507 8 HOH HOH . H 7 HOH A 8 508 9 HOH HOH . H 7 HOH A 9 509 10 HOH HOH . H 7 HOH A 10 510 11 HOH HOH . H 7 HOH A 11 511 12 HOH HOH . H 7 HOH A 12 512 13 HOH HOH . H 7 HOH A 13 513 14 HOH HOH . H 7 HOH A 14 514 15 HOH HOH . H 7 HOH A 15 515 17 HOH HOH . H 7 HOH A 16 516 19 HOH HOH . H 7 HOH A 17 517 21 HOH HOH . H 7 HOH A 18 518 22 HOH HOH . H 7 HOH A 19 519 23 HOH HOH . H 7 HOH A 20 520 24 HOH HOH . H 7 HOH A 21 521 25 HOH HOH . H 7 HOH A 22 522 26 HOH HOH . H 7 HOH A 23 523 27 HOH HOH . H 7 HOH A 24 524 28 HOH HOH . H 7 HOH A 25 525 30 HOH HOH . H 7 HOH A 26 526 32 HOH HOH . H 7 HOH A 27 527 34 HOH HOH . H 7 HOH A 28 528 35 HOH HOH . H 7 HOH A 29 529 36 HOH HOH . H 7 HOH A 30 530 37 HOH HOH . H 7 HOH A 31 531 38 HOH HOH . H 7 HOH A 32 532 39 HOH HOH . H 7 HOH A 33 533 40 HOH HOH . H 7 HOH A 34 534 41 HOH HOH . H 7 HOH A 35 535 42 HOH HOH . H 7 HOH A 36 536 43 HOH HOH . H 7 HOH A 37 537 44 HOH HOH . H 7 HOH A 38 538 45 HOH HOH . H 7 HOH A 39 539 46 HOH HOH . H 7 HOH A 40 540 47 HOH HOH . H 7 HOH A 41 541 48 HOH HOH . H 7 HOH A 42 542 49 HOH HOH . H 7 HOH A 43 543 50 HOH HOH . H 7 HOH A 44 544 51 HOH HOH . H 7 HOH A 45 545 53 HOH HOH . H 7 HOH A 46 546 54 HOH HOH . H 7 HOH A 47 547 56 HOH HOH . H 7 HOH A 48 548 57 HOH HOH . H 7 HOH A 49 549 58 HOH HOH . H 7 HOH A 50 550 59 HOH HOH . H 7 HOH A 51 551 60 HOH HOH . H 7 HOH A 52 552 61 HOH HOH . H 7 HOH A 53 553 62 HOH HOH . H 7 HOH A 54 554 63 HOH HOH . H 7 HOH A 55 555 64 HOH HOH . H 7 HOH A 56 556 65 HOH HOH . H 7 HOH A 57 557 67 HOH HOH . H 7 HOH A 58 558 68 HOH HOH . H 7 HOH A 59 559 69 HOH HOH . H 7 HOH A 60 560 70 HOH HOH . H 7 HOH A 61 561 71 HOH HOH . H 7 HOH A 62 562 72 HOH HOH . H 7 HOH A 63 563 73 HOH HOH . H 7 HOH A 64 564 74 HOH HOH . H 7 HOH A 65 565 75 HOH HOH . H 7 HOH A 66 566 76 HOH HOH . H 7 HOH A 67 567 78 HOH HOH . H 7 HOH A 68 568 79 HOH HOH . H 7 HOH A 69 569 81 HOH HOH . H 7 HOH A 70 570 82 HOH HOH . H 7 HOH A 71 571 83 HOH HOH . H 7 HOH A 72 572 84 HOH HOH . H 7 HOH A 73 573 85 HOH HOH . H 7 HOH A 74 574 86 HOH HOH . H 7 HOH A 75 575 88 HOH HOH . H 7 HOH A 76 576 89 HOH HOH . H 7 HOH A 77 577 90 HOH HOH . H 7 HOH A 78 578 92 HOH HOH . H 7 HOH A 79 579 94 HOH HOH . H 7 HOH A 80 580 95 HOH HOH . H 7 HOH A 81 581 96 HOH HOH . H 7 HOH A 82 582 97 HOH HOH . H 7 HOH A 83 583 102 HOH HOH . H 7 HOH A 84 584 104 HOH HOH . H 7 HOH A 85 585 105 HOH HOH . H 7 HOH A 86 586 106 HOH HOH . H 7 HOH A 87 587 108 HOH HOH . H 7 HOH A 88 588 114 HOH HOH . H 7 HOH A 89 589 115 HOH HOH . H 7 HOH A 90 590 117 HOH HOH . H 7 HOH A 91 591 119 HOH HOH . H 7 HOH A 92 592 121 HOH HOH . H 7 HOH A 93 593 122 HOH HOH . H 7 HOH A 94 594 123 HOH HOH . H 7 HOH A 95 595 124 HOH HOH . H 7 HOH A 96 596 125 HOH HOH . H 7 HOH A 97 597 126 HOH HOH . H 7 HOH A 98 598 128 HOH HOH . H 7 HOH A 99 599 129 HOH HOH . H 7 HOH A 100 600 130 HOH HOH . H 7 HOH A 101 601 131 HOH HOH . H 7 HOH A 102 602 133 HOH HOH . H 7 HOH A 103 603 134 HOH HOH . H 7 HOH A 104 604 135 HOH HOH . H 7 HOH A 105 605 136 HOH HOH . H 7 HOH A 106 606 138 HOH HOH . H 7 HOH A 107 607 139 HOH HOH . H 7 HOH A 108 608 140 HOH HOH . H 7 HOH A 109 609 142 HOH HOH . H 7 HOH A 110 610 143 HOH HOH . H 7 HOH A 111 611 144 HOH HOH . H 7 HOH A 112 612 145 HOH HOH . H 7 HOH A 113 613 146 HOH HOH . H 7 HOH A 114 614 148 HOH HOH . H 7 HOH A 115 615 149 HOH HOH . H 7 HOH A 116 616 150 HOH HOH . H 7 HOH A 117 617 151 HOH HOH . H 7 HOH A 118 618 152 HOH HOH . H 7 HOH A 119 619 153 HOH HOH . H 7 HOH A 120 620 154 HOH HOH . H 7 HOH A 121 621 155 HOH HOH . H 7 HOH A 122 622 156 HOH HOH . H 7 HOH A 123 623 158 HOH HOH . H 7 HOH A 124 624 162 HOH HOH . H 7 HOH A 125 625 163 HOH HOH . H 7 HOH A 126 626 164 HOH HOH . H 7 HOH A 127 627 166 HOH HOH . H 7 HOH A 128 628 168 HOH HOH . H 7 HOH A 129 629 169 HOH HOH . H 7 HOH A 130 630 170 HOH HOH . H 7 HOH A 131 631 171 HOH HOH . H 7 HOH A 132 632 172 HOH HOH . H 7 HOH A 133 633 173 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1B LMT . . . D 3 2.096 -1.527 26.647 1 88.59 ? C1B LMT 403 A 1 HETATM 2 C C2B LMT . . . D 3 0.732 -1.581 25.865 1 87.03 ? C2B LMT 403 A 1 HETATM 3 C C3B LMT . . . D 3 -0.162 -0.366 26.072 1 84.38 ? C3B LMT 403 A 1 HETATM 4 C C4B LMT . . . D 3 -0.265 -0.12 27.569 1 82.75 ? C4B LMT 403 A 1 HETATM 5 C C5B LMT . . . D 3 1.112 0.328 28.08 1 86.66 ? C5B LMT 403 A 1 HETATM 6 C C6B LMT . . . D 3 1.064 0.724 29.559 1 89.38 ? C6B LMT 403 A 1 HETATM 7 O O1B LMT . . . D 3 3.242 -1.237 25.802 1 91.68 ? O1B LMT 403 A 1 HETATM 8 O O2B LMT . . . D 3 0.808 -1.83 24.441 1 77.52 ? O2B LMT 403 A 1 HETATM 9 O O3B LMT . . . D 3 -1.439 -0.644 25.499 1 81.94 ? O3B LMT 403 A 1 HETATM 10 O O4' LMT . . . D 3 -1.326 0.81 27.841 1 93.77 ? O4' LMT 403 A 1 HETATM 11 O O5B LMT . . . D 3 2.122 -0.691 27.857 1 85.52 ? O5B LMT 403 A 1 HETATM 12 O O6B LMT . . . D 3 2.283 1.387 29.913 1 106.08 ? O6B LMT 403 A 1 HETATM 13 C C1' LMT . . . D 3 5.671 -4.883 25.805 1 82.3 ? C1' LMT 403 A 1 HETATM 14 C C2' LMT . . . D 3 6.252 -3.551 26.369 1 80.53 ? C2' LMT 403 A 1 HETATM 15 C C3' LMT . . . D 3 5.276 -2.382 26.595 1 85.16 ? C3' LMT 403 A 1 HETATM 16 C C4' LMT . . . D 3 4.205 -2.262 25.491 1 83.17 ? C4' LMT 403 A 1 HETATM 17 C C5' LMT . . . D 3 3.535 -3.611 25.11 1 88.38 ? C5' LMT 403 A 1 HETATM 18 C C6' LMT . . . D 3 2.839 -3.606 23.726 1 87.87 ? C6' LMT 403 A 1 HETATM 19 O O1' LMT . . . D 3 6.574 -5.594 24.883 1 108.83 ? O1' LMT 403 A 1 HETATM 20 O O2' LMT . . . D 3 6.897 -3.716 27.633 1 67.44 ? O2' LMT 403 A 1 HETATM 21 O O3' LMT . . . D 3 6.093 -1.195 26.679 1 81.48 ? O3' LMT 403 A 1 HETATM 22 O O5' LMT . . . D 3 4.405 -4.77 25.124 1 92.03 ? O5' LMT 403 A 1 HETATM 23 O O6' LMT . . . D 3 2.824 -4.915 23.099 1 79.35 ? O6' LMT 403 A 1 HETATM 24 C C1 LMT . . . D 3 6.059 -6.716 24.1 1 99.88 ? C1 LMT 403 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 251 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #