data_4Q33 # _model_server_result.job_id z7B_yWQrCxtfqH1ch4XRZg _model_server_result.datetime_utc '2024-11-25 04:40:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4q33 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":506}' # _entry.id 4Q33 # _exptl.entry_id 4Q33 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 70.82 _cell.angle_beta 72.66 _cell.angle_gamma 79.3 _cell.entry_id 4Q33 _cell.length_a 88.121 _cell.length_b 89.247 _cell.length_c 99.185 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Q33 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,I,J,K,L,M,N,O,P,Q,JA,KA,LA,MA 1 1 E,F,G,H,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,NA,OA,PA,QA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 Y N N ? 7 BA N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 184 n n C1 C2 GOL sing 185 n n C1 H11 GOL sing 186 n n C1 H12 GOL sing 187 n n O1 HO1 GOL sing 188 n n C2 O2 GOL sing 189 n n C2 C3 GOL sing 190 n n C2 H2 GOL sing 191 n n O2 HO2 GOL sing 192 n n C3 O3 GOL sing 193 n n C3 H31 GOL sing 194 n n C3 H32 GOL sing 195 n n O3 HO3 GOL sing 196 n n # _atom_sites.entry_id 4Q33 _atom_sites.fract_transf_matrix[1][1] 0.011348 _atom_sites.fract_transf_matrix[1][2] -0.002145 _atom_sites.fract_transf_matrix[1][3] -0.003052 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011403 _atom_sites.fract_transf_matrix[2][3] -0.003472 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011041 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 IMP A 1 500 500 IMP IMP . J 3 2YA A 1 501 501 2YA Z11 . K 2 IMP B 1 501 500 IMP IMP . L 3 2YA B 1 502 501 2YA Z11 . M 3 2YA B 1 503 501 2YA Z11 . N 2 IMP C 1 500 500 IMP IMP . O 3 2YA C 1 501 501 2YA Z11 . P 2 IMP D 1 501 500 IMP IMP . Q 4 ACY D 1 502 502 ACY ACY . R 2 IMP E 1 500 500 IMP IMP . S 3 2YA E 1 501 501 2YA Z11 . T 5 FMT E 1 502 502 FMT FMT . U 6 SO4 E 1 503 503 SO4 SO4 . V 2 IMP F 1 500 500 IMP IMP . W 3 2YA F 1 501 501 2YA Z11 . X 5 FMT F 1 502 502 FMT FMT . Y 7 GOL F 1 503 503 GOL GOL . Z 5 FMT F 1 504 504 FMT FMT . AA 5 FMT F 1 505 505 FMT FMT . BA 7 GOL F 1 506 506 GOL GOL . CA 2 IMP G 1 500 500 IMP IMP . DA 3 2YA G 1 501 501 2YA Z11 . EA 5 FMT G 1 502 502 FMT FMT . FA 2 IMP H 1 500 500 IMP IMP . GA 3 2YA H 1 501 501 2YA Z11 . HA 5 FMT H 1 502 502 FMT FMT . IA 5 FMT H 1 503 503 FMT FMT . JA 8 HOH A 1 601 7 HOH HOH . JA 8 HOH A 2 602 26 HOH HOH . JA 8 HOH A 3 603 29 HOH HOH . JA 8 HOH A 4 604 30 HOH HOH . JA 8 HOH A 5 605 35 HOH HOH . JA 8 HOH A 6 606 37 HOH HOH . JA 8 HOH A 7 607 44 HOH HOH . JA 8 HOH A 8 608 45 HOH HOH . JA 8 HOH A 9 609 46 HOH HOH . JA 8 HOH A 10 610 69 HOH HOH . JA 8 HOH A 11 611 70 HOH HOH . JA 8 HOH A 12 612 71 HOH HOH . JA 8 HOH A 13 613 72 HOH HOH . JA 8 HOH A 14 614 73 HOH HOH . JA 8 HOH A 15 615 79 HOH HOH . JA 8 HOH A 16 616 36 HOH HOH . KA 8 HOH B 1 601 1 HOH HOH . KA 8 HOH B 2 602 2 HOH HOH . KA 8 HOH B 3 603 6 HOH HOH . KA 8 HOH B 4 604 32 HOH HOH . KA 8 HOH B 5 605 41 HOH HOH . KA 8 HOH B 6 606 43 HOH HOH . KA 8 HOH B 7 607 53 HOH HOH . KA 8 HOH B 8 608 56 HOH HOH . KA 8 HOH B 9 609 57 HOH HOH . KA 8 HOH B 10 610 66 HOH HOH . KA 8 HOH B 11 611 67 HOH HOH . KA 8 HOH B 12 612 75 HOH HOH . KA 8 HOH B 13 613 76 HOH HOH . KA 8 HOH B 14 614 77 HOH HOH . KA 8 HOH B 15 615 78 HOH HOH . LA 8 HOH C 1 601 51 HOH HOH . LA 8 HOH C 2 602 3 HOH HOH . LA 8 HOH C 3 603 4 HOH HOH . LA 8 HOH C 4 604 5 HOH HOH . LA 8 HOH C 5 605 38 HOH HOH . LA 8 HOH C 6 606 48 HOH HOH . LA 8 HOH C 7 607 50 HOH HOH . LA 8 HOH C 8 608 52 HOH HOH . LA 8 HOH C 9 609 68 HOH HOH . LA 8 HOH C 10 610 86 HOH HOH . LA 8 HOH C 11 611 87 HOH HOH . LA 8 HOH C 12 612 88 HOH HOH . LA 8 HOH C 13 613 89 HOH HOH . LA 8 HOH C 14 614 92 HOH HOH . LA 8 HOH C 15 615 93 HOH HOH . LA 8 HOH C 16 616 125 HOH HOH . MA 8 HOH D 1 601 8 HOH HOH . MA 8 HOH D 2 602 9 HOH HOH . MA 8 HOH D 3 603 31 HOH HOH . MA 8 HOH D 4 604 33 HOH HOH . MA 8 HOH D 5 605 34 HOH HOH . MA 8 HOH D 6 606 42 HOH HOH . MA 8 HOH D 7 607 49 HOH HOH . MA 8 HOH D 8 608 58 HOH HOH . MA 8 HOH D 9 609 59 HOH HOH . MA 8 HOH D 10 610 83 HOH HOH . MA 8 HOH D 11 611 90 HOH HOH . MA 8 HOH D 12 612 91 HOH HOH . MA 8 HOH D 13 613 94 HOH HOH . MA 8 HOH D 14 614 118 HOH HOH . MA 8 HOH D 15 615 122 HOH HOH . MA 8 HOH D 16 616 128 HOH HOH . MA 8 HOH D 17 617 135 HOH HOH . NA 8 HOH E 1 601 10 HOH HOH . NA 8 HOH E 2 602 11 HOH HOH . NA 8 HOH E 3 603 12 HOH HOH . NA 8 HOH E 4 604 13 HOH HOH . NA 8 HOH E 5 605 14 HOH HOH . NA 8 HOH E 6 606 24 HOH HOH . NA 8 HOH E 7 607 28 HOH HOH . NA 8 HOH E 8 608 39 HOH HOH . NA 8 HOH E 9 609 40 HOH HOH . NA 8 HOH E 10 610 55 HOH HOH . NA 8 HOH E 11 611 60 HOH HOH . NA 8 HOH E 12 612 61 HOH HOH . NA 8 HOH E 13 613 65 HOH HOH . NA 8 HOH E 14 614 74 HOH HOH . NA 8 HOH E 15 615 96 HOH HOH . NA 8 HOH E 16 616 97 HOH HOH . NA 8 HOH E 17 617 98 HOH HOH . NA 8 HOH E 18 618 105 HOH HOH . NA 8 HOH E 19 619 106 HOH HOH . NA 8 HOH E 20 620 107 HOH HOH . NA 8 HOH E 21 621 126 HOH HOH . NA 8 HOH E 22 622 127 HOH HOH . OA 8 HOH F 1 601 15 HOH HOH . OA 8 HOH F 2 602 16 HOH HOH . OA 8 HOH F 3 603 17 HOH HOH . OA 8 HOH F 4 604 18 HOH HOH . OA 8 HOH F 5 605 19 HOH HOH . OA 8 HOH F 6 606 62 HOH HOH . OA 8 HOH F 7 607 63 HOH HOH . OA 8 HOH F 8 608 64 HOH HOH . OA 8 HOH F 9 609 84 HOH HOH . OA 8 HOH F 10 610 85 HOH HOH . OA 8 HOH F 11 611 99 HOH HOH . OA 8 HOH F 12 612 100 HOH HOH . OA 8 HOH F 13 613 101 HOH HOH . OA 8 HOH F 14 614 102 HOH HOH . OA 8 HOH F 15 615 103 HOH HOH . OA 8 HOH F 16 616 104 HOH HOH . OA 8 HOH F 17 617 108 HOH HOH . OA 8 HOH F 18 618 109 HOH HOH . OA 8 HOH F 19 619 110 HOH HOH . OA 8 HOH F 20 620 112 HOH HOH . OA 8 HOH F 21 621 124 HOH HOH . OA 8 HOH F 22 622 129 HOH HOH . OA 8 HOH F 23 623 136 HOH HOH . PA 8 HOH G 1 601 21 HOH HOH . PA 8 HOH G 2 602 22 HOH HOH . PA 8 HOH G 3 603 23 HOH HOH . PA 8 HOH G 4 604 25 HOH HOH . PA 8 HOH G 5 605 47 HOH HOH . PA 8 HOH G 6 606 80 HOH HOH . PA 8 HOH G 7 607 81 HOH HOH . PA 8 HOH G 8 608 123 HOH HOH . PA 8 HOH G 9 609 132 HOH HOH . PA 8 HOH G 10 610 133 HOH HOH . PA 8 HOH G 11 611 134 HOH HOH . QA 8 HOH H 1 601 20 HOH HOH . QA 8 HOH H 2 602 27 HOH HOH . QA 8 HOH H 3 603 54 HOH HOH . QA 8 HOH H 4 604 82 HOH HOH . QA 8 HOH H 5 605 95 HOH HOH . QA 8 HOH H 6 606 111 HOH HOH . QA 8 HOH H 7 607 113 HOH HOH . QA 8 HOH H 8 608 114 HOH HOH . QA 8 HOH H 9 609 115 HOH HOH . QA 8 HOH H 10 610 116 HOH HOH . QA 8 HOH H 11 611 117 HOH HOH . QA 8 HOH H 12 612 119 HOH HOH . QA 8 HOH H 13 613 120 HOH HOH . QA 8 HOH H 14 614 121 HOH HOH . QA 8 HOH H 15 615 130 HOH HOH . QA 8 HOH H 16 616 131 HOH HOH . QA 8 HOH H 17 617 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . BA 7 9.194 30.924 50.997 1 76.93 ? C1 GOL 506 F 1 HETATM 2 O O1 GOL . . . BA 7 9.729 31.506 52.165 1 78.85 ? O1 GOL 506 F 1 HETATM 3 C C2 GOL . . . BA 7 9.312 31.901 49.833 1 75.78 ? C2 GOL 506 F 1 HETATM 4 O O2 GOL . . . BA 7 8.031 32.398 49.507 1 67.43 ? O2 GOL 506 F 1 HETATM 5 C C3 GOL . . . BA 7 9.893 31.163 48.633 1 80.59 ? C3 GOL 506 F 1 HETATM 6 O O3 GOL . . . BA 7 10.052 32.044 47.543 1 80.91 ? O3 GOL 506 F 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #