data_4Q53
#
_model_server_result.job_id            oOnF3qOUryambSp0kXax6w 
_model_server_result.datetime_utc      '2024-11-14 19:33:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4q53 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":206}' 
#
_entry.id    4Q53 
#
_exptl.entry_id    4Q53 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              150.173 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'TRIETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          121.66 
_cell.angle_gamma         90 
_cell.entry_id            4Q53 
_cell.length_a            108.136 
_cell.length_b            37.109 
_cell.length_c            61.376 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4Q53 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,AA 1 1 
B,O,P,Q,R,S,T,U,V,W,X,Y,Z,BA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 H N N 
? 3 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C THR 47 A THR 67 1_555 A N MSE 48 A MSE 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 A C MSE 48 A MSE 68 1_555 A N ALA 49 A ALA 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale3 A C LEU 78 A LEU 98 1_555 A N MSE 79 A MSE 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale4 A C MSE 79 A MSE 99 1_555 A N THR 80 A THR 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 A C ASN 88 A ASN 108 1_555 A N CSO 89 A CSO 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? 
covale ? covale6 A C CSO 89 A CSO 109 1_555 A N PHE 90 A PHE 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale7 B C THR 47 B THR 67 1_555 B N MSE 48 B MSE 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale8 B C MSE 48 B MSE 68 1_555 B N ALA 49 B ALA 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? 
covale ? covale9 B C LEU 78 B LEU 98 1_555 B N MSE 79 B MSE 99 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.326 ? 
covale ? covale10 B C LEU 78 B LEU 98 1_555 B N MSE 79 B MSE 99 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.328 ? 
covale ? covale11 B C MSE 79 B MSE 99 1_555 B N THR 80 B THR 100 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale12 B C MSE 79 B MSE 99 1_555 B N THR 80 B THR 100 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.332 ? 
covale ? covale13 B C ASN 88 B ASN 108 1_555 B N CSO 89 B CSO 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
covale ? covale14 B C CSO 89 B CSO 109 1_555 B N PHE 90 B PHE 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
metalc ? metalc1 T O5 PG4 . B PG4 206 1_555 Z NA NA . B NA 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? 
metalc ? metalc2 T O4 PG4 . B PG4 206 1_555 Z NA NA . B NA 212 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.984 ? 
#
_chem_comp.formula           'C6 H14 O4' 
_chem_comp.formula_weight    150.173 
_chem_comp.id                PGE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'TRIETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4Q53 
_atom_sites.fract_transf_matrix[1][1]    0.009248 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005703 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.026948 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019142 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 IOD A 1 201 132 IOD IOD . 
D 2 IOD A 1 202 133 IOD IOD . 
E 2 IOD A 1 203 135 IOD IOD . 
F 2 IOD A 1 204 136 IOD IOD . 
G 2 IOD A 1 205 139 IOD IOD . 
H 3 PGE A 1 206 142 PGE PGE . 
I 3 PGE A 1 207 143 PGE PGE . 
J 4 CL A 1 208 146 CL CL . 
K 4 CL A 1 209 148 CL CL . 
L 4 CL A 1 210 149 CL CL . 
M 4 CL A 1 211 152 CL CL . 
N 5 EDO A 1 212 154 EDO EDO . 
O 2 IOD B 1 201 131 IOD IOD . 
P 2 IOD B 1 202 134 IOD IOD . 
Q 2 IOD B 1 203 137 IOD IOD . 
R 2 IOD B 1 204 138 IOD IOD . 
S 6 7PG B 1 205 140 7PG 7PG . 
T 7 PG4 B 1 206 141 PG4 PG4 . 
U 4 CL B 1 207 144 CL CL . 
V 4 CL B 1 208 145 CL CL . 
W 4 CL B 1 209 147 CL CL . 
X 4 CL B 1 210 150 CL CL . 
Y 4 CL B 1 211 151 CL CL . 
Z 8 NA B 1 212 153 NA NA . 
AA 9 HOH A 1 301 155 HOH HOH . 
AA 9 HOH A 2 302 156 HOH HOH . 
AA 9 HOH A 3 303 159 HOH HOH . 
AA 9 HOH A 4 304 162 HOH HOH . 
AA 9 HOH A 5 305 166 HOH HOH . 
AA 9 HOH A 6 306 170 HOH HOH . 
AA 9 HOH A 7 307 173 HOH HOH . 
AA 9 HOH A 8 308 174 HOH HOH . 
AA 9 HOH A 9 309 175 HOH HOH . 
AA 9 HOH A 10 310 176 HOH HOH . 
AA 9 HOH A 11 311 177 HOH HOH . 
AA 9 HOH A 12 312 178 HOH HOH . 
AA 9 HOH A 13 313 179 HOH HOH . 
AA 9 HOH A 14 314 180 HOH HOH . 
AA 9 HOH A 15 315 181 HOH HOH . 
AA 9 HOH A 16 316 195 HOH HOH . 
AA 9 HOH A 17 317 199 HOH HOH . 
AA 9 HOH A 18 318 200 HOH HOH . 
AA 9 HOH A 19 319 203 HOH HOH . 
AA 9 HOH A 20 320 204 HOH HOH . 
AA 9 HOH A 21 321 212 HOH HOH . 
AA 9 HOH A 22 322 214 HOH HOH . 
AA 9 HOH A 23 323 215 HOH HOH . 
AA 9 HOH A 24 324 216 HOH HOH . 
AA 9 HOH A 25 325 217 HOH HOH . 
AA 9 HOH A 26 326 218 HOH HOH . 
AA 9 HOH A 27 327 219 HOH HOH . 
AA 9 HOH A 28 328 226 HOH HOH . 
AA 9 HOH A 29 329 227 HOH HOH . 
AA 9 HOH A 30 330 228 HOH HOH . 
AA 9 HOH A 31 331 229 HOH HOH . 
AA 9 HOH A 32 332 230 HOH HOH . 
AA 9 HOH A 33 333 232 HOH HOH . 
AA 9 HOH A 34 334 233 HOH HOH . 
AA 9 HOH A 35 335 234 HOH HOH . 
AA 9 HOH A 36 336 235 HOH HOH . 
AA 9 HOH A 37 337 236 HOH HOH . 
AA 9 HOH A 38 338 237 HOH HOH . 
AA 9 HOH A 39 339 238 HOH HOH . 
AA 9 HOH A 40 340 239 HOH HOH . 
AA 9 HOH A 41 341 240 HOH HOH . 
AA 9 HOH A 42 342 241 HOH HOH . 
AA 9 HOH A 43 343 242 HOH HOH . 
AA 9 HOH A 44 344 243 HOH HOH . 
AA 9 HOH A 45 345 255 HOH HOH . 
AA 9 HOH A 46 346 257 HOH HOH . 
AA 9 HOH A 47 347 258 HOH HOH . 
AA 9 HOH A 48 348 267 HOH HOH . 
AA 9 HOH A 49 349 268 HOH HOH . 
AA 9 HOH A 50 350 269 HOH HOH . 
AA 9 HOH A 51 351 272 HOH HOH . 
AA 9 HOH A 52 352 273 HOH HOH . 
AA 9 HOH A 53 353 274 HOH HOH . 
AA 9 HOH A 54 354 275 HOH HOH . 
AA 9 HOH A 55 355 277 HOH HOH . 
AA 9 HOH A 56 356 279 HOH HOH . 
AA 9 HOH A 57 357 280 HOH HOH . 
AA 9 HOH A 58 358 281 HOH HOH . 
AA 9 HOH A 59 359 285 HOH HOH . 
AA 9 HOH A 60 360 287 HOH HOH . 
AA 9 HOH A 61 361 288 HOH HOH . 
AA 9 HOH A 62 362 289 HOH HOH . 
AA 9 HOH A 63 363 290 HOH HOH . 
AA 9 HOH A 64 364 291 HOH HOH . 
AA 9 HOH A 65 365 300 HOH HOH . 
AA 9 HOH A 66 366 303 HOH HOH . 
AA 9 HOH A 67 367 304 HOH HOH . 
AA 9 HOH A 68 368 305 HOH HOH . 
AA 9 HOH A 69 369 306 HOH HOH . 
AA 9 HOH A 70 370 307 HOH HOH . 
AA 9 HOH A 71 371 308 HOH HOH . 
AA 9 HOH A 72 372 309 HOH HOH . 
AA 9 HOH A 73 373 310 HOH HOH . 
AA 9 HOH A 74 374 316 HOH HOH . 
AA 9 HOH A 75 375 323 HOH HOH . 
AA 9 HOH A 76 376 325 HOH HOH . 
AA 9 HOH A 77 377 326 HOH HOH . 
AA 9 HOH A 78 378 327 HOH HOH . 
AA 9 HOH A 79 379 328 HOH HOH . 
AA 9 HOH A 80 380 329 HOH HOH . 
AA 9 HOH A 81 381 330 HOH HOH . 
AA 9 HOH A 82 382 331 HOH HOH . 
AA 9 HOH A 83 383 332 HOH HOH . 
AA 9 HOH A 84 384 333 HOH HOH . 
AA 9 HOH A 85 385 334 HOH HOH . 
AA 9 HOH A 86 386 335 HOH HOH . 
AA 9 HOH A 87 387 336 HOH HOH . 
BA 9 HOH B 1 301 157 HOH HOH . 
BA 9 HOH B 2 302 158 HOH HOH . 
BA 9 HOH B 3 303 160 HOH HOH . 
BA 9 HOH B 4 304 161 HOH HOH . 
BA 9 HOH B 5 305 163 HOH HOH . 
BA 9 HOH B 6 306 164 HOH HOH . 
BA 9 HOH B 7 307 165 HOH HOH . 
BA 9 HOH B 8 308 167 HOH HOH . 
BA 9 HOH B 9 309 168 HOH HOH . 
BA 9 HOH B 10 310 169 HOH HOH . 
BA 9 HOH B 11 311 171 HOH HOH . 
BA 9 HOH B 12 312 172 HOH HOH . 
BA 9 HOH B 13 313 182 HOH HOH . 
BA 9 HOH B 14 314 183 HOH HOH . 
BA 9 HOH B 15 315 184 HOH HOH . 
BA 9 HOH B 16 316 185 HOH HOH . 
BA 9 HOH B 17 317 186 HOH HOH . 
BA 9 HOH B 18 318 187 HOH HOH . 
BA 9 HOH B 19 319 188 HOH HOH . 
BA 9 HOH B 20 320 189 HOH HOH . 
BA 9 HOH B 21 321 190 HOH HOH . 
BA 9 HOH B 22 322 191 HOH HOH . 
BA 9 HOH B 23 323 192 HOH HOH . 
BA 9 HOH B 24 324 193 HOH HOH . 
BA 9 HOH B 25 325 194 HOH HOH . 
BA 9 HOH B 26 326 196 HOH HOH . 
BA 9 HOH B 27 327 197 HOH HOH . 
BA 9 HOH B 28 328 198 HOH HOH . 
BA 9 HOH B 29 329 201 HOH HOH . 
BA 9 HOH B 30 330 202 HOH HOH . 
BA 9 HOH B 31 331 205 HOH HOH . 
BA 9 HOH B 32 332 206 HOH HOH . 
BA 9 HOH B 33 333 207 HOH HOH . 
BA 9 HOH B 34 334 208 HOH HOH . 
BA 9 HOH B 35 335 209 HOH HOH . 
BA 9 HOH B 36 336 210 HOH HOH . 
BA 9 HOH B 37 337 211 HOH HOH . 
BA 9 HOH B 38 338 213 HOH HOH . 
BA 9 HOH B 39 339 220 HOH HOH . 
BA 9 HOH B 40 340 221 HOH HOH . 
BA 9 HOH B 41 341 222 HOH HOH . 
BA 9 HOH B 42 342 223 HOH HOH . 
BA 9 HOH B 43 343 224 HOH HOH . 
BA 9 HOH B 44 344 225 HOH HOH . 
BA 9 HOH B 45 345 231 HOH HOH . 
BA 9 HOH B 46 346 244 HOH HOH . 
BA 9 HOH B 47 347 245 HOH HOH . 
BA 9 HOH B 48 348 246 HOH HOH . 
BA 9 HOH B 49 349 247 HOH HOH . 
BA 9 HOH B 50 350 248 HOH HOH . 
BA 9 HOH B 51 351 249 HOH HOH . 
BA 9 HOH B 52 352 250 HOH HOH . 
BA 9 HOH B 53 353 251 HOH HOH . 
BA 9 HOH B 54 354 252 HOH HOH . 
BA 9 HOH B 55 355 253 HOH HOH . 
BA 9 HOH B 56 356 254 HOH HOH . 
BA 9 HOH B 57 357 256 HOH HOH . 
BA 9 HOH B 58 358 259 HOH HOH . 
BA 9 HOH B 59 359 260 HOH HOH . 
BA 9 HOH B 60 360 261 HOH HOH . 
BA 9 HOH B 61 361 262 HOH HOH . 
BA 9 HOH B 62 362 263 HOH HOH . 
BA 9 HOH B 63 363 264 HOH HOH . 
BA 9 HOH B 64 364 265 HOH HOH . 
BA 9 HOH B 65 365 266 HOH HOH . 
BA 9 HOH B 66 366 270 HOH HOH . 
BA 9 HOH B 67 367 271 HOH HOH . 
BA 9 HOH B 68 368 276 HOH HOH . 
BA 9 HOH B 69 369 278 HOH HOH . 
BA 9 HOH B 70 370 282 HOH HOH . 
BA 9 HOH B 71 371 283 HOH HOH . 
BA 9 HOH B 72 372 284 HOH HOH . 
BA 9 HOH B 73 373 286 HOH HOH . 
BA 9 HOH B 74 374 292 HOH HOH . 
BA 9 HOH B 75 375 293 HOH HOH . 
BA 9 HOH B 76 376 294 HOH HOH . 
BA 9 HOH B 77 377 295 HOH HOH . 
BA 9 HOH B 78 378 296 HOH HOH . 
BA 9 HOH B 79 379 297 HOH HOH . 
BA 9 HOH B 80 380 298 HOH HOH . 
BA 9 HOH B 81 381 299 HOH HOH . 
BA 9 HOH B 82 382 301 HOH HOH . 
BA 9 HOH B 83 383 302 HOH HOH . 
BA 9 HOH B 84 384 311 HOH HOH . 
BA 9 HOH B 85 385 312 HOH HOH . 
BA 9 HOH B 86 386 313 HOH HOH . 
BA 9 HOH B 87 387 314 HOH HOH . 
BA 9 HOH B 88 388 315 HOH HOH . 
BA 9 HOH B 89 389 317 HOH HOH . 
BA 9 HOH B 90 390 318 HOH HOH . 
BA 9 HOH B 91 391 319 HOH HOH . 
BA 9 HOH B 92 392 320 HOH HOH . 
BA 9 HOH B 93 393 321 HOH HOH . 
BA 9 HOH B 94 394 322 HOH HOH . 
BA 9 HOH B 95 395 324 HOH HOH . 
BA 9 HOH B 96 396 337 HOH HOH . 
BA 9 HOH B 97 397 338 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PGE . . . H 3 32.917 24.582 23.688 1 23.19 ? C1 PGE 206 A 1 
HETATM 2 O O1 PGE . . . H 3 32.426 23.688 24.619 1 17.76 ? O1 PGE 206 A 1 
HETATM 3 C C2 PGE . . . H 3 31.603 24.945 23.144 1 11.49 ? C2 PGE 206 A 1 
HETATM 4 O O2 PGE . . . H 3 31.532 24.932 21.8 1 19.78 ? O2 PGE 206 A 1 
HETATM 5 C C3 PGE . . . H 3 30.342 24.858 21.025 1 28.99 ? C3 PGE 206 A 1 
HETATM 6 C C4 PGE . . . H 3 30.721 24.667 19.587 1 29.79 ? C4 PGE 206 A 1 
HETATM 7 O O4 PGE . . . H 3 27.82 27.259 16.808 1 37.2 ? O4 PGE 206 A 1 
HETATM 8 C C6 PGE . . . H 3 28.957 27.339 17.634 1 35.19 ? C6 PGE 206 A 1 
HETATM 9 C C5 PGE . . . H 3 29.11 26.091 18.457 1 34.55 ? C5 PGE 206 A 1 
HETATM 10 O O3 PGE . . . H 3 30.442 25.905 18.831 1 35.23 ? O3 PGE 206 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           302 
_model_server_stats.encode_time_ms          29 
_model_server_stats.element_count           10 
#