data_4Q5T # _model_server_result.job_id BDCcT8CsQDVV8Md_oQ60ow _model_server_result.datetime_utc '2024-11-05 00:28:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4q5t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4Q5T # _exptl.entry_id 4Q5T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 414.488 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NONAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4Q5T _cell.length_a 58.021 _cell.length_b 106.053 _cell.length_c 95.22 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Q5T _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C VAL 13 A VAL 36 1_555 A N MSE 14 A MSE 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C MSE 14 A MSE 37 1_555 A N THR 15 A THR 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C THR 15 A THR 38 1_555 A N MSE 16 A MSE 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MSE 16 A MSE 39 1_555 A N THR 17 A THR 40 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C18 H38 O10' _chem_comp.formula_weight 414.488 _chem_comp.id 2PE _chem_comp.mon_nstd_flag . _chem_comp.name 'NONAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4Q5T _atom_sites.fract_transf_matrix[1][1] 0.017235 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009429 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010502 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MSE A 1 300 300 MSE MSE . C 3 2PE A 1 301 301 2PE 2PE . D 3 2PE A 1 302 302 2PE 2PE . E 3 2PE A 1 303 303 2PE 2PE . F 4 HOH A 1 401 304 HOH HOH . F 4 HOH A 2 402 305 HOH HOH . F 4 HOH A 3 403 306 HOH HOH . F 4 HOH A 4 404 307 HOH HOH . F 4 HOH A 5 405 308 HOH HOH . F 4 HOH A 6 406 309 HOH HOH . F 4 HOH A 7 407 310 HOH HOH . F 4 HOH A 8 408 311 HOH HOH . F 4 HOH A 9 409 312 HOH HOH . F 4 HOH A 10 410 313 HOH HOH . F 4 HOH A 11 411 314 HOH HOH . F 4 HOH A 12 412 315 HOH HOH . F 4 HOH A 13 413 316 HOH HOH . F 4 HOH A 14 414 317 HOH HOH . F 4 HOH A 15 415 318 HOH HOH . F 4 HOH A 16 416 319 HOH HOH . F 4 HOH A 17 417 320 HOH HOH . F 4 HOH A 18 418 321 HOH HOH . F 4 HOH A 19 419 322 HOH HOH . F 4 HOH A 20 420 323 HOH HOH . F 4 HOH A 21 421 324 HOH HOH . F 4 HOH A 22 422 325 HOH HOH . F 4 HOH A 23 423 326 HOH HOH . F 4 HOH A 24 424 327 HOH HOH . F 4 HOH A 25 425 328 HOH HOH . F 4 HOH A 26 426 329 HOH HOH . F 4 HOH A 27 427 330 HOH HOH . F 4 HOH A 28 428 331 HOH HOH . F 4 HOH A 29 429 332 HOH HOH . F 4 HOH A 30 430 333 HOH HOH . F 4 HOH A 31 431 334 HOH HOH . F 4 HOH A 32 432 335 HOH HOH . F 4 HOH A 33 433 336 HOH HOH . F 4 HOH A 34 434 337 HOH HOH . F 4 HOH A 35 435 338 HOH HOH . F 4 HOH A 36 436 339 HOH HOH . F 4 HOH A 37 437 340 HOH HOH . F 4 HOH A 38 438 341 HOH HOH . F 4 HOH A 39 439 342 HOH HOH . F 4 HOH A 40 440 343 HOH HOH . F 4 HOH A 41 441 344 HOH HOH . F 4 HOH A 42 442 345 HOH HOH . F 4 HOH A 43 443 346 HOH HOH . F 4 HOH A 44 444 347 HOH HOH . F 4 HOH A 45 445 348 HOH HOH . F 4 HOH A 46 446 349 HOH HOH . F 4 HOH A 47 447 350 HOH HOH . F 4 HOH A 48 448 351 HOH HOH . F 4 HOH A 49 449 352 HOH HOH . F 4 HOH A 50 450 353 HOH HOH . F 4 HOH A 51 451 354 HOH HOH . F 4 HOH A 52 452 355 HOH HOH . F 4 HOH A 53 453 356 HOH HOH . F 4 HOH A 54 454 357 HOH HOH . F 4 HOH A 55 455 358 HOH HOH . F 4 HOH A 56 456 359 HOH HOH . F 4 HOH A 57 457 360 HOH HOH . F 4 HOH A 58 458 361 HOH HOH . F 4 HOH A 59 459 362 HOH HOH . F 4 HOH A 60 460 363 HOH HOH . F 4 HOH A 61 461 364 HOH HOH . F 4 HOH A 62 462 365 HOH HOH . F 4 HOH A 63 463 366 HOH HOH . F 4 HOH A 64 464 367 HOH HOH . F 4 HOH A 65 465 368 HOH HOH . F 4 HOH A 66 466 369 HOH HOH . F 4 HOH A 67 467 370 HOH HOH . F 4 HOH A 68 468 371 HOH HOH . F 4 HOH A 69 469 372 HOH HOH . F 4 HOH A 70 470 373 HOH HOH . F 4 HOH A 71 471 374 HOH HOH . F 4 HOH A 72 472 375 HOH HOH . F 4 HOH A 73 473 376 HOH HOH . F 4 HOH A 74 474 377 HOH HOH . F 4 HOH A 75 475 378 HOH HOH . F 4 HOH A 76 476 379 HOH HOH . F 4 HOH A 77 477 380 HOH HOH . F 4 HOH A 78 478 381 HOH HOH . F 4 HOH A 79 479 382 HOH HOH . F 4 HOH A 80 480 383 HOH HOH . F 4 HOH A 81 481 384 HOH HOH . F 4 HOH A 82 482 385 HOH HOH . F 4 HOH A 83 483 386 HOH HOH . F 4 HOH A 84 484 387 HOH HOH . F 4 HOH A 85 485 388 HOH HOH . F 4 HOH A 86 486 389 HOH HOH . F 4 HOH A 87 487 390 HOH HOH . F 4 HOH A 88 488 391 HOH HOH . F 4 HOH A 89 489 392 HOH HOH . F 4 HOH A 90 490 393 HOH HOH . F 4 HOH A 91 491 394 HOH HOH . F 4 HOH A 92 492 395 HOH HOH . F 4 HOH A 93 493 396 HOH HOH . F 4 HOH A 94 494 397 HOH HOH . F 4 HOH A 95 495 398 HOH HOH . F 4 HOH A 96 496 399 HOH HOH . F 4 HOH A 97 497 400 HOH HOH . F 4 HOH A 98 498 401 HOH HOH . F 4 HOH A 99 499 402 HOH HOH . F 4 HOH A 100 500 403 HOH HOH . F 4 HOH A 101 501 404 HOH HOH . F 4 HOH A 102 502 405 HOH HOH . F 4 HOH A 103 503 406 HOH HOH . F 4 HOH A 104 504 407 HOH HOH . F 4 HOH A 105 505 408 HOH HOH . F 4 HOH A 106 506 409 HOH HOH . F 4 HOH A 107 507 410 HOH HOH . F 4 HOH A 108 508 411 HOH HOH . F 4 HOH A 109 509 412 HOH HOH . F 4 HOH A 110 510 413 HOH HOH . F 4 HOH A 111 511 414 HOH HOH . F 4 HOH A 112 512 415 HOH HOH . F 4 HOH A 113 513 416 HOH HOH . F 4 HOH A 114 514 417 HOH HOH . F 4 HOH A 115 515 418 HOH HOH . F 4 HOH A 116 516 419 HOH HOH . F 4 HOH A 117 517 420 HOH HOH . F 4 HOH A 118 518 421 HOH HOH . F 4 HOH A 119 519 422 HOH HOH . F 4 HOH A 120 520 423 HOH HOH . F 4 HOH A 121 521 424 HOH HOH . F 4 HOH A 122 522 425 HOH HOH . F 4 HOH A 123 523 426 HOH HOH . F 4 HOH A 124 524 427 HOH HOH . F 4 HOH A 125 525 428 HOH HOH . F 4 HOH A 126 526 429 HOH HOH . F 4 HOH A 127 527 430 HOH HOH . F 4 HOH A 128 528 431 HOH HOH . F 4 HOH A 129 529 432 HOH HOH . F 4 HOH A 130 530 433 HOH HOH . F 4 HOH A 131 531 434 HOH HOH . F 4 HOH A 132 532 435 HOH HOH . F 4 HOH A 133 533 436 HOH HOH . F 4 HOH A 134 534 437 HOH HOH . F 4 HOH A 135 535 438 HOH HOH . F 4 HOH A 136 536 439 HOH HOH . F 4 HOH A 137 537 440 HOH HOH . F 4 HOH A 138 538 441 HOH HOH . F 4 HOH A 139 539 442 HOH HOH . F 4 HOH A 140 540 443 HOH HOH . F 4 HOH A 141 541 444 HOH HOH . F 4 HOH A 142 542 445 HOH HOH . F 4 HOH A 143 543 446 HOH HOH . F 4 HOH A 144 544 447 HOH HOH . F 4 HOH A 145 545 448 HOH HOH . F 4 HOH A 146 546 449 HOH HOH . F 4 HOH A 147 547 450 HOH HOH . F 4 HOH A 148 548 451 HOH HOH . F 4 HOH A 149 549 452 HOH HOH . F 4 HOH A 150 550 453 HOH HOH . F 4 HOH A 151 551 454 HOH HOH . F 4 HOH A 152 552 455 HOH HOH . F 4 HOH A 153 553 456 HOH HOH . F 4 HOH A 154 554 457 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 2PE . . . C 3 9.749 52.485 49.577 1 70.36 ? O1 2PE 301 A 1 HETATM 2 C C2 2PE . . . C 3 10.96 51.721 49.622 1 68.1 ? C2 2PE 301 A 1 HETATM 3 C C3 2PE . . . C 3 12.152 52.64 49.377 1 63.73 ? C3 2PE 301 A 1 HETATM 4 O O4 2PE . . . C 3 12.439 53.455 50.506 1 59.63 ? O4 2PE 301 A 1 HETATM 5 C C5 2PE . . . C 3 13.557 54.3 50.245 1 54.66 ? C5 2PE 301 A 1 HETATM 6 C C6 2PE . . . C 3 12.988 55.67 49.926 1 50.82 ? C6 2PE 301 A 1 HETATM 7 O O7 2PE . . . C 3 12.029 56.007 50.921 1 51.69 ? O7 2PE 301 A 1 HETATM 8 C C8 2PE . . . C 3 11.048 56.909 50.423 1 48.78 ? C8 2PE 301 A 1 HETATM 9 C C9 2PE . . . C 3 10.241 57.524 51.56 1 43.2 ? C9 2PE 301 A 1 HETATM 10 O O10 2PE . . . C 3 8.993 56.855 51.674 1 44.44 ? O10 2PE 301 A 1 HETATM 11 C C11 2PE . . . C 3 8.386 57.053 52.938 1 50.2 ? C11 2PE 301 A 1 HETATM 12 C C12 2PE . . . C 3 7.083 56.274 52.992 1 55.31 ? C12 2PE 301 A 1 HETATM 13 O O13 2PE . . . C 3 7.379 54.885 53.08 1 67.13 ? O13 2PE 301 A 1 HETATM 14 C C14 2PE . . . C 3 6.341 54.138 53.716 1 68.07 ? C14 2PE 301 A 1 HETATM 15 C C15 2PE . . . C 3 6.611 52.646 53.536 1 64.93 ? C15 2PE 301 A 1 HETATM 16 O O16 2PE . . . C 3 8.005 52.429 53.309 1 62.83 ? O16 2PE 301 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #