data_4Q7V
#
_model_server_result.job_id            '_aYgtSb5NVQr2vamoz2aoQ' 
_model_server_result.datetime_utc      '2024-11-13 03:40:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4q7v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":302}' 
#
_entry.id    4Q7V 
#
_exptl.entry_id    4Q7V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              141.191 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-hydroxy-5-methylpyridine-2(1H)-thione 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.35 
_cell.angle_gamma         90 
_cell.entry_id            4Q7V 
_cell.length_a            42.062 
_cell.length_b            41.168 
_cell.length_c            71.577 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4Q7V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? 
metalc ? metalc4 A O VAL 134 A VAL 135 1_555 D HG MBO . A MBO 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.004 ? 
metalc ? metalc5 A O GLN 136 A GLN 137 1_555 D HG MBO . A MBO 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.998 ? 
metalc ? metalc6 B ZN ZN . A ZN 301 1_555 C S1 5MH . A 5MH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? 
#
_chem_comp.formula           'C6 H7 N O S' 
_chem_comp.formula_weight    141.191 
_chem_comp.id                5MH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-hydroxy-5-methylpyridine-2(1H)-thione 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C6 C4 5MH sing 1 n n 
C5 C4 5MH doub 2 n n 
C5 N1 5MH sing 3 n n 
C4 C3 5MH sing 4 n n 
O1 N1 5MH sing 5 n n 
N1 C1 5MH sing 6 n n 
C3 C2 5MH doub 7 n n 
C1 C2 5MH sing 8 n n 
C1 S1 5MH doub 9 n n 
C2 H1 5MH sing 10 n n 
C3 H2 5MH sing 11 n n 
C6 H3 5MH sing 12 n n 
C6 H4 5MH sing 13 n n 
C6 H5 5MH sing 14 n n 
C5 H6 5MH sing 15 n n 
O1 H7 5MH sing 16 n n 
#
_atom_sites.entry_id                     4Q7V 
_atom_sites.fract_transf_matrix[1][1]    0.023774 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00608 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024291 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014421 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 301 262 ZN ZN . 
C 3 5MH A 1 302 263 5MH 5MH . 
D 4 MBO A 1 303 264 MBO MBO . 
E 5 DMS A 1 304 265 DMS DMS . 
F 6 HOH A 1 401 266 HOH HOH . 
F 6 HOH A 2 402 267 HOH HOH . 
F 6 HOH A 3 403 268 HOH HOH . 
F 6 HOH A 4 404 269 HOH HOH . 
F 6 HOH A 5 405 270 HOH HOH . 
F 6 HOH A 6 406 271 HOH HOH . 
F 6 HOH A 7 407 272 HOH HOH . 
F 6 HOH A 8 408 273 HOH HOH . 
F 6 HOH A 9 409 274 HOH HOH . 
F 6 HOH A 10 410 275 HOH HOH . 
F 6 HOH A 11 411 276 HOH HOH . 
F 6 HOH A 12 412 277 HOH HOH . 
F 6 HOH A 13 413 278 HOH HOH . 
F 6 HOH A 14 414 279 HOH HOH . 
F 6 HOH A 15 415 280 HOH HOH . 
F 6 HOH A 16 416 281 HOH HOH . 
F 6 HOH A 17 417 282 HOH HOH . 
F 6 HOH A 18 418 283 HOH HOH . 
F 6 HOH A 19 419 284 HOH HOH . 
F 6 HOH A 20 420 285 HOH HOH . 
F 6 HOH A 21 421 286 HOH HOH . 
F 6 HOH A 22 422 287 HOH HOH . 
F 6 HOH A 23 423 288 HOH HOH . 
F 6 HOH A 24 424 289 HOH HOH . 
F 6 HOH A 25 425 290 HOH HOH . 
F 6 HOH A 26 426 291 HOH HOH . 
F 6 HOH A 27 427 292 HOH HOH . 
F 6 HOH A 28 428 293 HOH HOH . 
F 6 HOH A 29 429 294 HOH HOH . 
F 6 HOH A 30 430 295 HOH HOH . 
F 6 HOH A 31 431 296 HOH HOH . 
F 6 HOH A 32 432 297 HOH HOH . 
F 6 HOH A 33 433 298 HOH HOH . 
F 6 HOH A 34 434 299 HOH HOH . 
F 6 HOH A 35 435 300 HOH HOH . 
F 6 HOH A 36 436 301 HOH HOH . 
F 6 HOH A 37 437 302 HOH HOH . 
F 6 HOH A 38 438 303 HOH HOH . 
F 6 HOH A 39 439 304 HOH HOH . 
F 6 HOH A 40 440 305 HOH HOH . 
F 6 HOH A 41 441 306 HOH HOH . 
F 6 HOH A 42 442 307 HOH HOH . 
F 6 HOH A 43 443 308 HOH HOH . 
F 6 HOH A 44 444 309 HOH HOH . 
F 6 HOH A 45 445 310 HOH HOH . 
F 6 HOH A 46 446 311 HOH HOH . 
F 6 HOH A 47 447 312 HOH HOH . 
F 6 HOH A 48 448 313 HOH HOH . 
F 6 HOH A 49 449 314 HOH HOH . 
F 6 HOH A 50 450 315 HOH HOH . 
F 6 HOH A 51 451 316 HOH HOH . 
F 6 HOH A 52 452 317 HOH HOH . 
F 6 HOH A 53 453 318 HOH HOH . 
F 6 HOH A 54 454 319 HOH HOH . 
F 6 HOH A 55 455 320 HOH HOH . 
F 6 HOH A 56 456 321 HOH HOH . 
F 6 HOH A 57 457 322 HOH HOH . 
F 6 HOH A 58 458 323 HOH HOH . 
F 6 HOH A 59 459 324 HOH HOH . 
F 6 HOH A 60 460 325 HOH HOH . 
F 6 HOH A 61 461 326 HOH HOH . 
F 6 HOH A 62 462 327 HOH HOH . 
F 6 HOH A 63 463 328 HOH HOH . 
F 6 HOH A 64 464 329 HOH HOH . 
F 6 HOH A 65 465 330 HOH HOH . 
F 6 HOH A 66 466 331 HOH HOH . 
F 6 HOH A 67 467 332 HOH HOH . 
F 6 HOH A 68 468 333 HOH HOH . 
F 6 HOH A 69 469 334 HOH HOH . 
F 6 HOH A 70 470 335 HOH HOH . 
F 6 HOH A 71 471 336 HOH HOH . 
F 6 HOH A 72 472 337 HOH HOH . 
F 6 HOH A 73 473 338 HOH HOH . 
F 6 HOH A 74 474 339 HOH HOH . 
F 6 HOH A 75 475 340 HOH HOH . 
F 6 HOH A 76 476 341 HOH HOH . 
F 6 HOH A 77 477 342 HOH HOH . 
F 6 HOH A 78 478 343 HOH HOH . 
F 6 HOH A 79 479 344 HOH HOH . 
F 6 HOH A 80 480 345 HOH HOH . 
F 6 HOH A 81 481 346 HOH HOH . 
F 6 HOH A 82 482 347 HOH HOH . 
F 6 HOH A 83 483 348 HOH HOH . 
F 6 HOH A 84 484 349 HOH HOH . 
F 6 HOH A 85 485 350 HOH HOH . 
F 6 HOH A 86 486 351 HOH HOH . 
F 6 HOH A 87 487 352 HOH HOH . 
F 6 HOH A 88 488 353 HOH HOH . 
F 6 HOH A 89 489 354 HOH HOH . 
F 6 HOH A 90 490 355 HOH HOH . 
F 6 HOH A 91 491 356 HOH HOH . 
F 6 HOH A 92 492 357 HOH HOH . 
F 6 HOH A 93 493 358 HOH HOH . 
F 6 HOH A 94 494 359 HOH HOH . 
F 6 HOH A 95 495 360 HOH HOH . 
F 6 HOH A 96 496 361 HOH HOH . 
F 6 HOH A 97 497 362 HOH HOH . 
F 6 HOH A 98 498 363 HOH HOH . 
F 6 HOH A 99 499 364 HOH HOH . 
F 6 HOH A 100 500 365 HOH HOH . 
F 6 HOH A 101 501 366 HOH HOH . 
F 6 HOH A 102 502 367 HOH HOH . 
F 6 HOH A 103 503 368 HOH HOH . 
F 6 HOH A 104 504 369 HOH HOH . 
F 6 HOH A 105 505 370 HOH HOH . 
F 6 HOH A 106 506 371 HOH HOH . 
F 6 HOH A 107 507 372 HOH HOH . 
F 6 HOH A 108 508 373 HOH HOH . 
F 6 HOH A 109 509 374 HOH HOH . 
F 6 HOH A 110 510 375 HOH HOH . 
F 6 HOH A 111 511 376 HOH HOH . 
F 6 HOH A 112 512 377 HOH HOH . 
F 6 HOH A 113 513 378 HOH HOH . 
F 6 HOH A 114 514 379 HOH HOH . 
F 6 HOH A 115 515 380 HOH HOH . 
F 6 HOH A 116 516 381 HOH HOH . 
F 6 HOH A 117 517 382 HOH HOH . 
F 6 HOH A 118 518 383 HOH HOH . 
F 6 HOH A 119 519 384 HOH HOH . 
F 6 HOH A 120 520 385 HOH HOH . 
F 6 HOH A 121 521 386 HOH HOH . 
F 6 HOH A 122 522 387 HOH HOH . 
F 6 HOH A 123 523 388 HOH HOH . 
F 6 HOH A 124 524 389 HOH HOH . 
F 6 HOH A 125 525 390 HOH HOH . 
F 6 HOH A 126 526 391 HOH HOH . 
F 6 HOH A 127 527 392 HOH HOH . 
F 6 HOH A 128 528 393 HOH HOH . 
F 6 HOH A 129 529 394 HOH HOH . 
F 6 HOH A 130 530 395 HOH HOH . 
F 6 HOH A 131 531 396 HOH HOH . 
F 6 HOH A 132 532 397 HOH HOH . 
F 6 HOH A 133 533 398 HOH HOH . 
F 6 HOH A 134 534 399 HOH HOH . 
F 6 HOH A 135 535 400 HOH HOH . 
F 6 HOH A 136 536 401 HOH HOH . 
F 6 HOH A 137 537 402 HOH HOH . 
F 6 HOH A 138 538 403 HOH HOH . 
F 6 HOH A 139 539 404 HOH HOH . 
F 6 HOH A 140 540 405 HOH HOH . 
F 6 HOH A 141 541 406 HOH HOH . 
F 6 HOH A 142 542 407 HOH HOH . 
F 6 HOH A 143 543 408 HOH HOH . 
F 6 HOH A 144 544 409 HOH HOH . 
F 6 HOH A 145 545 410 HOH HOH . 
F 6 HOH A 146 546 411 HOH HOH . 
F 6 HOH A 147 547 412 HOH HOH . 
F 6 HOH A 148 548 413 HOH HOH . 
F 6 HOH A 149 549 414 HOH HOH . 
F 6 HOH A 150 550 415 HOH HOH . 
F 6 HOH A 151 551 416 HOH HOH . 
F 6 HOH A 152 552 417 HOH HOH . 
F 6 HOH A 153 553 418 HOH HOH . 
F 6 HOH A 154 554 419 HOH HOH . 
F 6 HOH A 155 555 420 HOH HOH . 
F 6 HOH A 156 556 421 HOH HOH . 
F 6 HOH A 157 557 422 HOH HOH . 
F 6 HOH A 158 558 423 HOH HOH . 
F 6 HOH A 159 559 424 HOH HOH . 
F 6 HOH A 160 560 425 HOH HOH . 
F 6 HOH A 161 561 426 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 5MH . . . C 3 14.866 0.032 17.07 1 16.19 ? S1 5MH 302 A 1 
HETATM 2 C C1 5MH . . . C 3 15.254 1.338 16.015 1 11.48 ? C1 5MH 302 A 1 
HETATM 3 C C2 5MH . . . C 3 14.702 2.621 16.245 1 14.18 ? C2 5MH 302 A 1 
HETATM 4 C C3 5MH . . . C 3 15.005 3.64 15.421 1 15.72 ? C3 5MH 302 A 1 
HETATM 5 C C4 5MH . . . C 3 15.848 3.437 14.36 1 15.94 ? C4 5MH 302 A 1 
HETATM 6 C C6 5MH . . . C 3 16.185 4.574 13.443 1 23.23 ? C6 5MH 302 A 1 
HETATM 7 C C5 5MH . . . C 3 16.389 2.181 14.135 1 15.75 ? C5 5MH 302 A 1 
HETATM 8 N N1 5MH . . . C 3 16.079 1.138 14.978 1 11.46 ? N1 5MH 302 A 1 
HETATM 9 O O1 5MH . . . C 3 16.61 -0.097 14.758 1 10.89 ? O1 5MH 302 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           9 
#