data_4QAI # _model_server_result.job_id tNAqeEZfBXM3dPu_WtTn8A _model_server_result.datetime_utc '2025-01-10 20:15:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qai # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":501}' # _entry.id 4QAI # _exptl.entry_id 4QAI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4QAI _cell.length_a 226.787 _cell.length_b 226.787 _cell.length_c 360.851 _cell.Z_PDB 108 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QAI _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,G,M 1 1,2 B,H,N 2 1,3 C,E,I,K,O,Q 3 1 D,F,J,L,P 4 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 18_444 -x-2/3,-x+y-1/3,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 -113.3935 -65.467768 -120.283667 3 'crystal symmetry operation' 11_444 x-y-1/3,-y-2/3,-z-2/3 1 0 0 0 -1 0 0 0 -1 0 -130.935535 -240.567333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 4QAI _atom_sites.fract_transf_matrix[1][1] 0.004409 _atom_sites.fract_transf_matrix[1][2] 0.002546 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005092 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002771 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 FMN A 1 501 406 FMN FMN . H 2 FMN B 1 501 406 FMN FMN . I 2 FMN C 1 501 406 FMN FMN . J 2 FMN D 1 501 406 FMN FMN . K 2 FMN E 1 501 406 FMN FMN . L 2 FMN F 1 501 406 FMN FMN . M 3 HOH A 1 601 2 HOH HOH . M 3 HOH A 2 602 4 HOH HOH . M 3 HOH A 3 603 7 HOH HOH . M 3 HOH A 4 604 12 HOH HOH . M 3 HOH A 5 605 15 HOH HOH . M 3 HOH A 6 606 16 HOH HOH . M 3 HOH A 7 607 19 HOH HOH . N 3 HOH B 1 601 1 HOH HOH . N 3 HOH B 2 602 3 HOH HOH . N 3 HOH B 3 603 8 HOH HOH . N 3 HOH B 4 604 18 HOH HOH . N 3 HOH B 5 605 21 HOH HOH . O 3 HOH C 1 601 11 HOH HOH . O 3 HOH C 2 602 13 HOH HOH . P 3 HOH D 1 601 6 HOH HOH . P 3 HOH D 2 602 10 HOH HOH . P 3 HOH D 3 603 22 HOH HOH . Q 3 HOH E 1 601 5 HOH HOH . Q 3 HOH E 2 602 9 HOH HOH . Q 3 HOH E 3 603 14 HOH HOH . Q 3 HOH E 4 604 17 HOH HOH . Q 3 HOH E 5 605 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . L 2 -19.464 -26.635 -34.145 1 75.89 ? N1 FMN 501 F 1 HETATM 2 C C2 FMN . . . L 2 -18.267 -26.01 -34.014 1 72.79 ? C2 FMN 501 F 1 HETATM 3 O O2 FMN . . . L 2 -17.484 -26.006 -34.988 1 67.47 ? O2 FMN 501 F 1 HETATM 4 N N3 FMN . . . L 2 -17.888 -25.396 -32.88 1 81.2 ? N3 FMN 501 F 1 HETATM 5 C C4 FMN . . . L 2 -18.668 -25.356 -31.794 1 83.77 ? C4 FMN 501 F 1 HETATM 6 O O4 FMN . . . L 2 -18.288 -24.777 -30.754 1 89.14 ? O4 FMN 501 F 1 HETATM 7 C C4A FMN . . . L 2 -19.995 -26.016 -31.853 1 72.35 ? C4A FMN 501 F 1 HETATM 8 N N5 FMN . . . L 2 -20.841 -26.021 -30.8 1 63.35 ? N5 FMN 501 F 1 HETATM 9 C C5A FMN . . . L 2 -22.046 -26.632 -30.885 1 61.87 ? C5A FMN 501 F 1 HETATM 10 C C6 FMN . . . L 2 -22.9 -26.624 -29.788 1 57.35 ? C6 FMN 501 F 1 HETATM 11 C C7 FMN . . . L 2 -24.139 -27.249 -29.866 1 55.79 ? C7 FMN 501 F 1 HETATM 12 C C7M FMN . . . L 2 -25.062 -27.239 -28.676 1 63.81 ? C7M FMN 501 F 1 HETATM 13 C C8 FMN . . . L 2 -24.554 -27.928 -31.122 1 47.55 ? C8 FMN 501 F 1 HETATM 14 C C8M FMN . . . L 2 -25.897 -28.604 -31.204 1 57.5 ? C8M FMN 501 F 1 HETATM 15 C C9 FMN . . . L 2 -23.703 -27.938 -32.221 1 50.02 ? C9 FMN 501 F 1 HETATM 16 C C9A FMN . . . L 2 -22.464 -27.313 -32.144 1 56.11 ? C9A FMN 501 F 1 HETATM 17 N N10 FMN . . . L 2 -21.595 -27.318 -33.252 1 57.81 ? N10 FMN 501 F 1 HETATM 18 C C10 FMN . . . L 2 -20.351 -26.674 -33.13 1 69.66 ? C10 FMN 501 F 1 HETATM 19 C C1' FMN . . . L 2 -21.978 -27.98 -34.502 1 70.03 ? C1' FMN 501 F 1 HETATM 20 C C2' FMN . . . L 2 -21.503 -29.428 -34.472 1 74.12 ? C2' FMN 501 F 1 HETATM 21 O O2' FMN . . . L 2 -20.072 -29.46 -34.423 1 64.66 ? O2' FMN 501 F 1 HETATM 22 C C3' FMN . . . L 2 -21.986 -30.191 -35.7 1 60.9 ? C3' FMN 501 F 1 HETATM 23 O O3' FMN . . . L 2 -21.561 -29.505 -36.883 1 63.7 ? O3' FMN 501 F 1 HETATM 24 C C4' FMN . . . L 2 -23.505 -30.323 -35.71 1 71.31 ? C4' FMN 501 F 1 HETATM 25 O O4' FMN . . . L 2 -23.983 -30.503 -34.372 1 65.65 ? O4' FMN 501 F 1 HETATM 26 C C5' FMN . . . L 2 -23.941 -31.507 -36.565 1 66.74 ? C5' FMN 501 F 1 HETATM 27 O O5' FMN . . . L 2 -23.515 -32.719 -35.948 1 63.6 ? O5' FMN 501 F 1 HETATM 28 P P FMN . . . L 2 -24.593 -33.779 -35.396 1 71.51 ? P FMN 501 F 1 HETATM 29 O O1P FMN . . . L 2 -23.8 -35.053 -35.233 1 79.84 ? O1P FMN 501 F 1 HETATM 30 O O2P FMN . . . L 2 -25.639 -33.831 -36.484 1 58.65 -1 O2P FMN 501 F 1 HETATM 31 O O3P FMN . . . L 2 -25.07 -33.173 -34.099 1 55.38 -1 O3P FMN 501 F 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 29 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #