data_4QBS # _model_server_result.job_id 88LLGDN9AGXYaocvDaRpxQ _model_server_result.datetime_utc '2025-07-31 00:18:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qbs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":702}' # _entry.id 4QBS # _exptl.entry_id 4QBS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4QBS _cell.length_a 57.286 _cell.length_b 57.286 _cell.length_c 71.923 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QBS _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C ARG 2 P ARG 2 1_555 B N TPO 3 P TPO 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 B C TPO 3 P TPO 3 1_555 B N LYS 4 P LYS 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? metalc ? metalc1 A SG CYS 21 A CYS 494 1_555 E ZN ZN . A ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc2 A SG CYS 24 A CYS 497 1_555 E ZN ZN . A ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.286 ? metalc ? metalc3 A SG CYS 41 A CYS 514 1_555 E ZN ZN . A ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc4 A SG CYS 44 A CYS 517 1_555 E ZN ZN . A ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.356 ? metalc ? metalc5 A SG CYS 64 A CYS 537 1_555 D ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc6 A SG CYS 67 A CYS 540 1_555 D ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc7 A SG CYS 76 A CYS 549 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc8 A SG CYS 81 A CYS 554 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc9 A SG CYS 86 A CYS 559 1_555 D ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc10 A SG CYS 89 A CYS 562 1_555 D ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc11 A SG CYS 110 A CYS 583 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc12 A SG CYS 113 A CYS 586 1_555 C ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4QBS _atom_sites.fract_transf_matrix[1][1] 0.017456 _atom_sites.fract_transf_matrix[1][2] 0.010078 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020157 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013904 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 701 474 ZN ZN . D 3 ZN A 1 702 475 ZN ZN . E 3 ZN A 1 703 476 ZN ZN . F 4 SO4 A 1 704 1 SO4 SO4 . G 5 HOH A 1 801 1 HOH HOH . G 5 HOH A 2 802 2 HOH HOH . G 5 HOH A 3 803 3 HOH HOH . G 5 HOH A 4 804 4 HOH HOH . G 5 HOH A 5 805 5 HOH HOH . G 5 HOH A 6 806 6 HOH HOH . G 5 HOH A 7 807 7 HOH HOH . G 5 HOH A 8 808 8 HOH HOH . G 5 HOH A 9 809 9 HOH HOH . G 5 HOH A 10 810 10 HOH HOH . G 5 HOH A 11 811 11 HOH HOH . G 5 HOH A 12 812 12 HOH HOH . G 5 HOH A 13 813 13 HOH HOH . G 5 HOH A 14 814 14 HOH HOH . G 5 HOH A 15 815 15 HOH HOH . G 5 HOH A 16 816 16 HOH HOH . G 5 HOH A 17 817 17 HOH HOH . G 5 HOH A 18 818 18 HOH HOH . G 5 HOH A 19 819 19 HOH HOH . G 5 HOH A 20 820 20 HOH HOH . G 5 HOH A 21 821 22 HOH HOH . G 5 HOH A 22 822 23 HOH HOH . G 5 HOH A 23 823 25 HOH HOH . G 5 HOH A 24 824 27 HOH HOH . G 5 HOH A 25 825 28 HOH HOH . G 5 HOH A 26 826 29 HOH HOH . G 5 HOH A 27 827 30 HOH HOH . G 5 HOH A 28 828 31 HOH HOH . G 5 HOH A 29 829 32 HOH HOH . G 5 HOH A 30 830 33 HOH HOH . G 5 HOH A 31 831 34 HOH HOH . G 5 HOH A 32 832 35 HOH HOH . G 5 HOH A 33 833 36 HOH HOH . G 5 HOH A 34 834 37 HOH HOH . G 5 HOH A 35 835 38 HOH HOH . G 5 HOH A 36 836 39 HOH HOH . G 5 HOH A 37 837 40 HOH HOH . G 5 HOH A 38 838 41 HOH HOH . G 5 HOH A 39 839 42 HOH HOH . G 5 HOH A 40 840 43 HOH HOH . G 5 HOH A 41 841 44 HOH HOH . G 5 HOH A 42 842 45 HOH HOH . G 5 HOH A 43 843 46 HOH HOH . G 5 HOH A 44 844 47 HOH HOH . G 5 HOH A 45 845 48 HOH HOH . G 5 HOH A 46 846 49 HOH HOH . G 5 HOH A 47 847 50 HOH HOH . G 5 HOH A 48 848 51 HOH HOH . G 5 HOH A 49 849 52 HOH HOH . G 5 HOH A 50 850 54 HOH HOH . G 5 HOH A 51 851 55 HOH HOH . G 5 HOH A 52 852 56 HOH HOH . G 5 HOH A 53 853 57 HOH HOH . G 5 HOH A 54 854 59 HOH HOH . G 5 HOH A 55 855 60 HOH HOH . G 5 HOH A 56 856 61 HOH HOH . G 5 HOH A 57 857 62 HOH HOH . G 5 HOH A 58 858 63 HOH HOH . G 5 HOH A 59 859 64 HOH HOH . G 5 HOH A 60 860 65 HOH HOH . G 5 HOH A 61 861 66 HOH HOH . G 5 HOH A 62 862 67 HOH HOH . G 5 HOH A 63 863 68 HOH HOH . G 5 HOH A 64 864 69 HOH HOH . G 5 HOH A 65 865 70 HOH HOH . G 5 HOH A 66 866 71 HOH HOH . G 5 HOH A 67 867 72 HOH HOH . G 5 HOH A 68 868 73 HOH HOH . G 5 HOH A 69 869 74 HOH HOH . G 5 HOH A 70 870 75 HOH HOH . G 5 HOH A 71 871 76 HOH HOH . G 5 HOH A 72 872 77 HOH HOH . G 5 HOH A 73 873 78 HOH HOH . G 5 HOH A 74 874 79 HOH HOH . G 5 HOH A 75 875 80 HOH HOH . G 5 HOH A 76 876 81 HOH HOH . G 5 HOH A 77 877 82 HOH HOH . G 5 HOH A 78 878 83 HOH HOH . G 5 HOH A 79 879 84 HOH HOH . G 5 HOH A 80 880 85 HOH HOH . G 5 HOH A 81 881 86 HOH HOH . G 5 HOH A 82 882 87 HOH HOH . G 5 HOH A 83 883 89 HOH HOH . G 5 HOH A 84 884 90 HOH HOH . G 5 HOH A 85 885 92 HOH HOH . G 5 HOH A 86 886 93 HOH HOH . G 5 HOH A 87 887 94 HOH HOH . G 5 HOH A 88 888 96 HOH HOH . G 5 HOH A 89 889 97 HOH HOH . G 5 HOH A 90 890 98 HOH HOH . G 5 HOH A 91 891 99 HOH HOH . G 5 HOH A 92 892 100 HOH HOH . G 5 HOH A 93 893 101 HOH HOH . G 5 HOH A 94 894 102 HOH HOH . G 5 HOH A 95 895 103 HOH HOH . G 5 HOH A 96 896 104 HOH HOH . G 5 HOH A 97 897 105 HOH HOH . G 5 HOH A 98 898 106 HOH HOH . G 5 HOH A 99 899 108 HOH HOH . G 5 HOH A 100 900 109 HOH HOH . G 5 HOH A 101 901 111 HOH HOH . G 5 HOH A 102 902 112 HOH HOH . G 5 HOH A 103 903 113 HOH HOH . G 5 HOH A 104 904 114 HOH HOH . G 5 HOH A 105 905 115 HOH HOH . G 5 HOH A 106 906 116 HOH HOH . G 5 HOH A 107 907 117 HOH HOH . G 5 HOH A 108 908 118 HOH HOH . G 5 HOH A 109 909 119 HOH HOH . G 5 HOH A 110 910 120 HOH HOH . G 5 HOH A 111 911 121 HOH HOH . G 5 HOH A 112 912 122 HOH HOH . G 5 HOH A 113 913 123 HOH HOH . G 5 HOH A 114 914 125 HOH HOH . G 5 HOH A 115 915 126 HOH HOH . G 5 HOH A 116 916 58 HOH HOH . H 5 HOH P 1 101 21 HOH HOH . H 5 HOH P 2 102 24 HOH HOH . H 5 HOH P 3 103 26 HOH HOH . H 5 HOH P 4 104 53 HOH HOH . H 5 HOH P 5 105 88 HOH HOH . H 5 HOH P 6 106 91 HOH HOH . H 5 HOH P 7 107 95 HOH HOH . H 5 HOH P 8 108 110 HOH HOH . H 5 HOH P 9 109 124 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 18.594 _atom_site.Cartn_y -19.928 _atom_site.Cartn_z -7.458 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 21.23 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 702 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #