data_4QBT
#
_model_server_result.job_id            2d-cDdqxam2vHMnCZ7ajZw 
_model_server_result.datetime_utc      '2024-11-12 20:43:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4qbt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    4QBT 
#
_exptl.entry_id    4QBT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4QBT 
_cell.length_a            75.251 
_cell.length_b            162.641 
_cell.length_c            35.422 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QBT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 150.502 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 42 A THR 42 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.042 ? 
metalc ? metalc2 A O ALA 43 A ALA 43 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.742 ? 
metalc ? metalc3 A OH TYR 52 A TYR 52 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.717 ? 
metalc ? metalc4 A OH TYR 97 A TYR 97 1_555 C K K . A K 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.083 ? 
metalc ? metalc5 C K K . A K 502 1_555 K O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? 
metalc ? metalc6 C K K . A K 502 1_555 K O HOH . A HOH 693 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.299 ? 
metalc ? metalc7 J K K . A K 509 1_555 K O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.466 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4QBT 
_atom_sites.fract_transf_matrix[1][1]    0.013289 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006149 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.028231 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PO4 A 1 501 501 PO4 PO4 . 
C 3 K A 1 502 701 K K . 
D 4 GOL A 1 503 601 GOL GOL . 
E 4 GOL A 1 504 602 GOL GOL . 
F 5 SO4 A 1 505 2 SO4 SO4 . 
G 6 TYR A 1 506 1 TYR TYR . 
H 2 PO4 A 1 507 1 PO4 PO4 . 
I 2 PO4 A 1 508 2 PO4 PO4 . 
J 3 K A 1 509 1 K K . 
K 7 HOH A 1 601 1 HOH HOH . 
K 7 HOH A 2 602 2 HOH HOH . 
K 7 HOH A 3 603 3 HOH HOH . 
K 7 HOH A 4 604 4 HOH HOH . 
K 7 HOH A 5 605 5 HOH HOH . 
K 7 HOH A 6 606 6 HOH HOH . 
K 7 HOH A 7 607 7 HOH HOH . 
K 7 HOH A 8 608 8 HOH HOH . 
K 7 HOH A 9 609 9 HOH HOH . 
K 7 HOH A 10 610 10 HOH HOH . 
K 7 HOH A 11 611 11 HOH HOH . 
K 7 HOH A 12 612 12 HOH HOH . 
K 7 HOH A 13 613 13 HOH HOH . 
K 7 HOH A 14 614 14 HOH HOH . 
K 7 HOH A 15 615 15 HOH HOH . 
K 7 HOH A 16 616 16 HOH HOH . 
K 7 HOH A 17 617 17 HOH HOH . 
K 7 HOH A 18 618 18 HOH HOH . 
K 7 HOH A 19 619 19 HOH HOH . 
K 7 HOH A 20 620 20 HOH HOH . 
K 7 HOH A 21 621 21 HOH HOH . 
K 7 HOH A 22 622 22 HOH HOH . 
K 7 HOH A 23 623 23 HOH HOH . 
K 7 HOH A 24 624 24 HOH HOH . 
K 7 HOH A 25 625 25 HOH HOH . 
K 7 HOH A 26 626 26 HOH HOH . 
K 7 HOH A 27 627 27 HOH HOH . 
K 7 HOH A 28 628 28 HOH HOH . 
K 7 HOH A 29 629 29 HOH HOH . 
K 7 HOH A 30 630 30 HOH HOH . 
K 7 HOH A 31 631 31 HOH HOH . 
K 7 HOH A 32 632 32 HOH HOH . 
K 7 HOH A 33 633 34 HOH HOH . 
K 7 HOH A 34 634 35 HOH HOH . 
K 7 HOH A 35 635 36 HOH HOH . 
K 7 HOH A 36 636 37 HOH HOH . 
K 7 HOH A 37 637 38 HOH HOH . 
K 7 HOH A 38 638 39 HOH HOH . 
K 7 HOH A 39 639 41 HOH HOH . 
K 7 HOH A 40 640 42 HOH HOH . 
K 7 HOH A 41 641 43 HOH HOH . 
K 7 HOH A 42 642 44 HOH HOH . 
K 7 HOH A 43 643 45 HOH HOH . 
K 7 HOH A 44 644 46 HOH HOH . 
K 7 HOH A 45 645 47 HOH HOH . 
K 7 HOH A 46 646 48 HOH HOH . 
K 7 HOH A 47 647 49 HOH HOH . 
K 7 HOH A 48 648 50 HOH HOH . 
K 7 HOH A 49 649 51 HOH HOH . 
K 7 HOH A 50 650 52 HOH HOH . 
K 7 HOH A 51 651 53 HOH HOH . 
K 7 HOH A 52 652 55 HOH HOH . 
K 7 HOH A 53 653 56 HOH HOH . 
K 7 HOH A 54 654 57 HOH HOH . 
K 7 HOH A 55 655 58 HOH HOH . 
K 7 HOH A 56 656 59 HOH HOH . 
K 7 HOH A 57 657 60 HOH HOH . 
K 7 HOH A 58 658 61 HOH HOH . 
K 7 HOH A 59 659 62 HOH HOH . 
K 7 HOH A 60 660 63 HOH HOH . 
K 7 HOH A 61 661 64 HOH HOH . 
K 7 HOH A 62 662 65 HOH HOH . 
K 7 HOH A 63 663 66 HOH HOH . 
K 7 HOH A 64 664 67 HOH HOH . 
K 7 HOH A 65 665 69 HOH HOH . 
K 7 HOH A 66 666 71 HOH HOH . 
K 7 HOH A 67 667 72 HOH HOH . 
K 7 HOH A 68 668 74 HOH HOH . 
K 7 HOH A 69 669 75 HOH HOH . 
K 7 HOH A 70 670 76 HOH HOH . 
K 7 HOH A 71 671 77 HOH HOH . 
K 7 HOH A 72 672 78 HOH HOH . 
K 7 HOH A 73 673 79 HOH HOH . 
K 7 HOH A 74 674 80 HOH HOH . 
K 7 HOH A 75 675 81 HOH HOH . 
K 7 HOH A 76 676 82 HOH HOH . 
K 7 HOH A 77 677 84 HOH HOH . 
K 7 HOH A 78 678 85 HOH HOH . 
K 7 HOH A 79 679 86 HOH HOH . 
K 7 HOH A 80 680 87 HOH HOH . 
K 7 HOH A 81 681 88 HOH HOH . 
K 7 HOH A 82 682 89 HOH HOH . 
K 7 HOH A 83 683 90 HOH HOH . 
K 7 HOH A 84 684 91 HOH HOH . 
K 7 HOH A 85 685 92 HOH HOH . 
K 7 HOH A 86 686 94 HOH HOH . 
K 7 HOH A 87 687 95 HOH HOH . 
K 7 HOH A 88 688 96 HOH HOH . 
K 7 HOH A 89 689 97 HOH HOH . 
K 7 HOH A 90 690 98 HOH HOH . 
K 7 HOH A 91 691 100 HOH HOH . 
K 7 HOH A 92 692 102 HOH HOH . 
K 7 HOH A 93 693 103 HOH HOH . 
K 7 HOH A 94 694 104 HOH HOH . 
K 7 HOH A 95 695 105 HOH HOH . 
K 7 HOH A 96 696 106 HOH HOH . 
K 7 HOH A 97 697 107 HOH HOH . 
K 7 HOH A 98 698 108 HOH HOH . 
K 7 HOH A 99 699 110 HOH HOH . 
K 7 HOH A 100 700 112 HOH HOH . 
K 7 HOH A 101 701 113 HOH HOH . 
K 7 HOH A 102 702 114 HOH HOH . 
K 7 HOH A 103 703 115 HOH HOH . 
K 7 HOH A 104 704 117 HOH HOH . 
K 7 HOH A 105 705 118 HOH HOH . 
K 7 HOH A 106 706 119 HOH HOH . 
K 7 HOH A 107 707 121 HOH HOH . 
K 7 HOH A 108 708 122 HOH HOH . 
K 7 HOH A 109 709 124 HOH HOH . 
K 7 HOH A 110 710 125 HOH HOH . 
K 7 HOH A 111 711 126 HOH HOH . 
K 7 HOH A 112 712 127 HOH HOH . 
K 7 HOH A 113 713 128 HOH HOH . 
K 7 HOH A 114 714 131 HOH HOH . 
K 7 HOH A 115 715 133 HOH HOH . 
K 7 HOH A 116 716 135 HOH HOH . 
K 7 HOH A 117 717 136 HOH HOH . 
K 7 HOH A 118 718 137 HOH HOH . 
K 7 HOH A 119 719 138 HOH HOH . 
K 7 HOH A 120 720 139 HOH HOH . 
K 7 HOH A 121 721 141 HOH HOH . 
K 7 HOH A 122 722 143 HOH HOH . 
K 7 HOH A 123 723 146 HOH HOH . 
K 7 HOH A 124 724 149 HOH HOH . 
K 7 HOH A 125 725 150 HOH HOH . 
K 7 HOH A 126 726 151 HOH HOH . 
K 7 HOH A 127 727 152 HOH HOH . 
K 7 HOH A 128 728 154 HOH HOH . 
K 7 HOH A 129 729 155 HOH HOH . 
K 7 HOH A 130 730 156 HOH HOH . 
K 7 HOH A 131 731 158 HOH HOH . 
K 7 HOH A 132 732 159 HOH HOH . 
K 7 HOH A 133 733 160 HOH HOH . 
K 7 HOH A 134 734 161 HOH HOH . 
K 7 HOH A 135 735 162 HOH HOH . 
K 7 HOH A 136 736 163 HOH HOH . 
K 7 HOH A 137 737 166 HOH HOH . 
K 7 HOH A 138 738 167 HOH HOH . 
K 7 HOH A 139 739 168 HOH HOH . 
K 7 HOH A 140 740 170 HOH HOH . 
K 7 HOH A 141 741 172 HOH HOH . 
K 7 HOH A 142 742 173 HOH HOH . 
K 7 HOH A 143 743 174 HOH HOH . 
K 7 HOH A 144 744 175 HOH HOH . 
K 7 HOH A 145 745 176 HOH HOH . 
K 7 HOH A 146 746 177 HOH HOH . 
K 7 HOH A 147 747 179 HOH HOH . 
K 7 HOH A 148 748 181 HOH HOH . 
K 7 HOH A 149 749 183 HOH HOH . 
K 7 HOH A 150 750 185 HOH HOH . 
K 7 HOH A 151 751 200 HOH HOH . 
K 7 HOH A 152 752 202 HOH HOH . 
K 7 HOH A 153 753 205 HOH HOH . 
K 7 HOH A 154 754 210 HOH HOH . 
K 7 HOH A 155 755 211 HOH HOH . 
K 7 HOH A 156 756 213 HOH HOH . 
K 7 HOH A 157 757 215 HOH HOH . 
K 7 HOH A 158 758 216 HOH HOH . 
K 7 HOH A 159 759 217 HOH HOH . 
K 7 HOH A 160 760 218 HOH HOH . 
K 7 HOH A 161 761 220 HOH HOH . 
K 7 HOH A 162 762 221 HOH HOH . 
K 7 HOH A 163 763 223 HOH HOH . 
K 7 HOH A 164 764 224 HOH HOH . 
K 7 HOH A 165 765 225 HOH HOH . 
K 7 HOH A 166 766 226 HOH HOH . 
K 7 HOH A 167 767 227 HOH HOH . 
K 7 HOH A 168 768 228 HOH HOH . 
K 7 HOH A 169 769 229 HOH HOH . 
K 7 HOH A 170 770 230 HOH HOH . 
K 7 HOH A 171 771 231 HOH HOH . 
K 7 HOH A 172 772 232 HOH HOH . 
K 7 HOH A 173 773 233 HOH HOH . 
K 7 HOH A 174 774 234 HOH HOH . 
K 7 HOH A 175 775 237 HOH HOH . 
K 7 HOH A 176 776 238 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 61.009 42.098 25.34 1 52.5 ? C1 GOL 503 A 1 
HETATM 2 O O1 GOL . . . D 4 61.698 42.296 24.108 1 57.24 ? O1 GOL 503 A 1 
HETATM 3 C C2 GOL . . . D 4 61.461 40.76 25.877 1 50.08 ? C2 GOL 503 A 1 
HETATM 4 O O2 GOL . . . D 4 62.82 40.707 25.547 1 54.1 ? O2 GOL 503 A 1 
HETATM 5 C C3 GOL . . . D 4 61.339 40.632 27.385 1 48.4 ? C3 GOL 503 A 1 
HETATM 6 O O3 GOL . . . D 4 62.65 40.596 27.955 1 49.34 ? O3 GOL 503 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           297 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#