data_4QCD # _model_server_result.job_id kJYYwoIIVL0dEA7bD39fxg _model_server_result.datetime_utc '2024-11-23 20:28:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qcd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 4QCD # loop_ _exptl.entry_id _exptl.method 4QCD 'X-RAY DIFFRACTION' 4QCD 'NEUTRON DIFFRACTION' # _entity.details ? _entity.formula_weight 22.042 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description trideuteriooxidanium _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QCD _cell.length_a 71.107 _cell.length_b 97.278 _cell.length_c 43.174 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QCD _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'D3 O 1' _chem_comp.formula_weight 22.042 _chem_comp.id D3O _chem_comp.mon_nstd_flag . _chem_comp.name trideuteriooxidanium _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'perdeuterated oxonium' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O D1 D3O sing 163 n n O D2 D3O sing 164 n n O D3 D3O sing 165 n n # _atom_sites.entry_id 4QCD _atom_sites.fract_transf_matrix[1][1] 0.014063 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01028 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023162 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BLA A 1 301 301 BLA BLA . C 3 D3O A 1 302 401 D3O D3O . D 4 HOH A 1 401 402 HOH HOH . D 4 HOH A 2 402 403 HOH HOH . D 4 HOH A 3 403 404 HOH HOH . D 4 HOH A 4 404 405 HOH HOH . D 4 HOH A 5 405 406 HOH HOH . D 4 HOH A 6 406 407 HOH HOH . D 4 HOH A 7 407 408 HOH HOH . D 4 HOH A 8 408 409 HOH HOH . D 4 HOH A 9 409 410 HOH HOH . D 4 HOH A 10 410 411 HOH HOH . D 4 HOH A 11 411 412 HOH HOH . D 4 HOH A 12 412 413 HOH HOH . D 4 HOH A 13 413 414 HOH HOH . D 4 HOH A 14 414 415 HOH HOH . D 4 HOH A 15 415 416 HOH HOH . D 4 HOH A 16 416 417 HOH HOH . D 4 HOH A 17 417 418 HOH HOH . D 4 HOH A 18 418 419 HOH HOH . D 4 HOH A 19 419 420 HOH HOH . D 4 HOH A 20 420 421 HOH HOH . D 4 HOH A 21 421 422 HOH HOH . D 4 HOH A 22 422 423 HOH HOH . D 4 HOH A 23 423 424 HOH HOH . D 4 HOH A 24 424 425 HOH HOH . D 4 HOH A 25 425 426 HOH HOH . D 4 HOH A 26 426 427 HOH HOH . D 4 HOH A 27 427 428 HOH HOH . D 4 HOH A 28 428 429 HOH HOH . D 4 HOH A 29 429 430 HOH HOH . D 4 HOH A 30 430 431 HOH HOH . D 4 HOH A 31 431 432 HOH HOH . D 4 HOH A 32 432 433 HOH HOH . D 4 HOH A 33 433 434 HOH HOH . D 4 HOH A 34 434 435 HOH HOH . D 4 HOH A 35 435 436 HOH HOH . D 4 HOH A 36 436 437 HOH HOH . D 4 HOH A 37 437 438 HOH HOH . D 4 HOH A 38 438 439 HOH HOH . D 4 HOH A 39 439 440 HOH HOH . D 4 HOH A 40 440 441 HOH HOH . D 4 HOH A 41 441 442 HOH HOH . D 4 HOH A 42 442 443 HOH HOH . D 4 HOH A 43 443 444 HOH HOH . D 4 HOH A 44 444 445 HOH HOH . D 4 HOH A 45 445 446 HOH HOH . D 4 HOH A 46 446 447 HOH HOH . D 4 HOH A 47 447 448 HOH HOH . D 4 HOH A 48 448 449 HOH HOH . D 4 HOH A 49 449 450 HOH HOH . D 4 HOH A 50 450 451 HOH HOH . D 4 HOH A 51 451 452 HOH HOH . D 4 HOH A 52 452 453 HOH HOH . D 4 HOH A 53 453 454 HOH HOH . D 4 HOH A 54 454 455 HOH HOH . D 4 HOH A 55 455 456 HOH HOH . D 4 HOH A 56 456 457 HOH HOH . D 4 HOH A 57 457 458 HOH HOH . D 4 HOH A 58 458 459 HOH HOH . D 4 HOH A 59 459 460 HOH HOH . D 4 HOH A 60 460 461 HOH HOH . D 4 HOH A 61 461 462 HOH HOH . D 4 HOH A 62 462 463 HOH HOH . D 4 HOH A 63 463 464 HOH HOH . D 4 HOH A 64 464 465 HOH HOH . D 4 HOH A 65 465 466 HOH HOH . D 4 HOH A 66 466 467 HOH HOH . D 4 HOH A 67 467 468 HOH HOH . D 4 HOH A 68 468 469 HOH HOH . D 4 HOH A 69 469 470 HOH HOH . D 4 HOH A 70 470 471 HOH HOH . D 4 HOH A 71 471 472 HOH HOH . D 4 HOH A 72 472 473 HOH HOH . D 4 HOH A 73 473 474 HOH HOH . D 4 HOH A 74 474 475 HOH HOH . D 4 HOH A 75 475 476 HOH HOH . D 4 HOH A 76 476 477 HOH HOH . D 4 HOH A 77 477 478 HOH HOH . D 4 HOH A 78 478 479 HOH HOH . D 4 HOH A 79 479 480 HOH HOH . D 4 HOH A 80 480 481 HOH HOH . D 4 HOH A 81 481 482 HOH HOH . D 4 HOH A 82 482 483 HOH HOH . D 4 HOH A 83 483 484 HOH HOH . D 4 HOH A 84 484 485 HOH HOH . D 4 HOH A 85 485 486 HOH HOH . D 4 HOH A 86 486 487 HOH HOH . D 4 HOH A 87 487 488 HOH HOH . D 4 HOH A 88 488 489 HOH HOH . D 4 HOH A 89 489 490 HOH HOH . D 4 HOH A 90 490 491 HOH HOH . D 4 HOH A 91 491 492 HOH HOH . D 4 HOH A 92 492 493 HOH HOH . D 4 HOH A 93 493 494 HOH HOH . D 4 HOH A 94 494 495 HOH HOH . D 4 HOH A 95 495 496 HOH HOH . D 4 HOH A 96 496 497 HOH HOH . D 4 HOH A 97 497 498 HOH HOH . D 4 HOH A 98 498 499 HOH HOH . D 4 HOH A 99 499 500 HOH HOH . D 4 HOH A 100 500 501 HOH HOH . D 4 HOH A 101 501 502 HOH HOH . D 4 HOH A 102 502 503 HOH HOH . D 4 HOH A 103 503 504 HOH HOH . D 4 HOH A 104 504 505 HOH HOH . D 4 HOH A 105 505 506 HOH HOH . D 4 HOH A 106 506 507 HOH HOH . D 4 HOH A 107 507 508 HOH HOH . D 4 HOH A 108 508 509 HOH HOH . D 4 HOH A 109 509 510 HOH HOH . D 4 HOH A 110 510 511 HOH HOH . D 4 HOH A 111 511 512 HOH HOH . D 4 HOH A 112 512 513 HOH HOH . D 4 HOH A 113 513 514 HOH HOH . D 4 HOH A 114 514 515 HOH HOH . D 4 HOH A 115 515 516 HOH HOH . D 4 HOH A 116 516 517 HOH HOH . D 4 HOH A 117 517 518 HOH HOH . D 4 HOH A 118 518 519 HOH HOH . D 4 HOH A 119 519 520 HOH HOH . D 4 HOH A 120 520 521 HOH HOH . D 4 HOH A 121 521 522 HOH HOH . D 4 HOH A 122 522 523 HOH HOH . D 4 HOH A 123 523 524 HOH HOH . D 4 HOH A 124 524 525 HOH HOH . D 4 HOH A 125 525 526 HOH HOH . D 4 HOH A 126 526 527 HOH HOH . D 4 HOH A 127 527 528 HOH HOH . D 4 HOH A 128 528 529 HOH HOH . D 4 HOH A 129 529 530 HOH HOH . D 4 HOH A 130 530 531 HOH HOH . D 4 HOH A 131 531 532 HOH HOH . D 4 HOH A 132 532 533 HOH HOH . D 4 HOH A 133 533 534 HOH HOH . D 4 HOH A 134 534 535 HOH HOH . D 4 HOH A 135 535 536 HOH HOH . D 4 HOH A 136 536 537 HOH HOH . D 4 HOH A 137 537 538 HOH HOH . D 4 HOH A 138 538 539 HOH HOH . D 4 HOH A 139 539 540 HOH HOH . D 4 HOH A 140 540 541 HOH HOH . D 4 HOH A 141 541 542 HOH HOH . D 4 HOH A 142 542 543 HOH HOH . D 4 HOH A 143 543 544 HOH HOH . D 4 HOH A 144 544 545 HOH HOH . D 4 HOH A 145 545 546 HOH HOH . D 4 HOH A 146 546 547 HOH HOH . D 4 HOH A 147 547 548 HOH HOH . D 4 HOH A 148 548 549 HOH HOH . D 4 HOH A 149 549 550 HOH HOH . D 4 HOH A 150 550 551 HOH HOH . D 4 HOH A 151 551 552 HOH HOH . D 4 HOH A 152 552 553 HOH HOH . D 4 HOH A 153 553 554 HOH HOH . D 4 HOH A 154 554 556 HOH HOH . D 4 HOH A 155 555 557 HOH HOH . D 4 HOH A 156 556 558 HOH HOH . D 4 HOH A 157 557 559 HOH HOH . D 4 HOH A 158 558 560 HOH HOH . D 4 HOH A 159 559 561 HOH HOH . D 4 HOH A 160 560 562 HOH HOH . D 4 HOH A 161 561 563 HOH HOH . D 4 HOH A 162 562 564 HOH HOH . D 4 HOH A 163 563 565 HOH HOH . D 4 HOH A 164 564 566 HOH HOH . D 4 HOH A 165 565 568 HOH HOH . D 4 HOH A 166 566 569 HOH HOH . D 4 HOH A 167 567 570 HOH HOH . D 4 HOH A 168 568 571 HOH HOH . D 4 HOH A 169 569 572 HOH HOH . D 4 HOH A 170 570 573 HOH HOH . D 4 HOH A 171 571 574 HOH HOH . D 4 HOH A 172 572 575 HOH HOH . D 4 HOH A 173 573 576 HOH HOH . D 4 HOH A 174 574 577 HOH HOH . D 4 HOH A 175 575 578 HOH HOH . D 4 HOH A 176 576 579 HOH HOH . D 4 HOH A 177 577 580 HOH HOH . D 4 HOH A 178 578 581 HOH HOH . D 4 HOH A 179 579 582 HOH HOH . D 4 HOH A 180 580 583 HOH HOH . D 4 HOH A 181 581 584 HOH HOH . D 4 HOH A 182 582 585 HOH HOH . D 4 HOH A 183 583 586 HOH HOH . D 4 HOH A 184 584 587 HOH HOH . D 4 HOH A 185 585 588 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O D3O . . . C 3 9.001 -15.275 37.816 1 18.5 ? O D3O 302 A 1 HETATM 2 D D1 D3O . . . C 3 8.43 -15.942 38.336 1 30.83 ? D1 D3O 302 A 1 HETATM 3 D D2 D3O . . . C 3 9.345 -14.569 38.404 1 26.7 ? D2 D3O 302 A 1 HETATM 4 D D3 D3O . . . C 3 8.551 -14.931 37.044 1 26.55 ? D3 D3O 302 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #