data_4QCK # _model_server_result.job_id dERjRZ3gI1a1-Twyer8uoA _model_server_result.datetime_utc '2024-10-12 04:22:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qck # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":404}' # _entry.id 4QCK # _exptl.entry_id 4QCK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 286.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-ANDROSTENE-3-17-DIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4QCK _cell.length_a 115.8 _cell.length_b 115.8 _cell.length_c 80.81 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QCK _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -y,x-y+1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 -57.9 100.285742 0 3 'crystal symmetry operation' 3_455 -x+y-1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 -115.8 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 67 A CYS 67 1_555 C FE2 FES . A FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? metalc ? metalc2 A ND1 HIS 69 A HIS 69 1_555 C FE1 FES . A FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc3 A SG CYS 86 A CYS 86 1_555 C FE2 FES . A FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc4 A ND1 HIS 89 A HIS 89 1_555 C FE1 FES . A FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc5 A NE2 HIS 181 A HIS 181 1_555 B FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc6 A OD2 ASP 304 A ASP 304 1_555 B FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc7 A OD1 ASP 304 A ASP 304 1_555 B FE FE . A FE 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc8 B FE FE . A FE 401 1_555 F O HOH . A HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? # _chem_comp.formula 'C19 H26 O2' _chem_comp.formula_weight 286.409 _chem_comp.id ASD _chem_comp.mon_nstd_flag . _chem_comp.name 4-ANDROSTENE-3-17-DIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C10 ASD sing 39 n n C1 C2 ASD sing 40 n n C1 H11 ASD sing 41 n n C1 H12 ASD sing 42 n n C10 C19 ASD sing 43 n n C10 C5 ASD sing 44 n n C10 C9 ASD sing 45 n n C11 C12 ASD sing 46 n n C11 C9 ASD sing 47 n n C11 H111 ASD sing 48 n n C11 H112 ASD sing 49 n n C12 C13 ASD sing 50 n n C12 H121 ASD sing 51 n n C12 H122 ASD sing 52 n n C13 C14 ASD sing 53 n n C13 C17 ASD sing 54 n n C13 C18 ASD sing 55 n n C14 C15 ASD sing 56 n n C14 C8 ASD sing 57 n n C14 H14 ASD sing 58 n n C15 C16 ASD sing 59 n n C15 H151 ASD sing 60 n n C15 H152 ASD sing 61 n n C16 C17 ASD sing 62 n n C16 H161 ASD sing 63 n n C16 H162 ASD sing 64 n n C17 O2 ASD doub 65 n n C18 H181 ASD sing 66 n n C18 H182 ASD sing 67 n n C18 H183 ASD sing 68 n n C19 H191 ASD sing 69 n n C19 H192 ASD sing 70 n n C19 H193 ASD sing 71 n n C2 C3 ASD sing 72 n n C2 H21 ASD sing 73 n n C2 H22 ASD sing 74 n n C3 C4 ASD sing 75 n n C3 O1 ASD doub 76 n n C4 C5 ASD doub 77 n n C4 H4 ASD sing 78 n n C5 C6 ASD sing 79 n n C6 C7 ASD sing 80 n n C6 H61 ASD sing 81 n n C6 H62 ASD sing 82 n n C7 C8 ASD sing 83 n n C7 H71 ASD sing 84 n n C7 H72 ASD sing 85 n n C8 C9 ASD sing 86 n n C8 H8 ASD sing 87 n n C9 H9 ASD sing 88 n n # _atom_sites.entry_id 4QCK _atom_sites.fract_transf_matrix[1][1] 0.008636 _atom_sites.fract_transf_matrix[1][2] 0.004986 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009972 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012375 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 401 376 FE FE . C 3 FES A 1 402 377 FES FES . D 4 PO4 A 1 403 1 PO4 PO4 . E 5 ASD A 1 404 1 ASD ASD . F 6 HOH A 1 501 1 HOH HOH . F 6 HOH A 2 502 2 HOH HOH . F 6 HOH A 3 503 3 HOH HOH . F 6 HOH A 4 504 4 HOH HOH . F 6 HOH A 5 505 5 HOH HOH . F 6 HOH A 6 506 6 HOH HOH . F 6 HOH A 7 507 7 HOH HOH . F 6 HOH A 8 508 10 HOH HOH . F 6 HOH A 9 509 11 HOH HOH . F 6 HOH A 10 510 12 HOH HOH . F 6 HOH A 11 511 13 HOH HOH . F 6 HOH A 12 512 14 HOH HOH . F 6 HOH A 13 513 15 HOH HOH . F 6 HOH A 14 514 17 HOH HOH . F 6 HOH A 15 515 18 HOH HOH . F 6 HOH A 16 516 19 HOH HOH . F 6 HOH A 17 517 22 HOH HOH . F 6 HOH A 18 518 23 HOH HOH . F 6 HOH A 19 519 24 HOH HOH . F 6 HOH A 20 520 25 HOH HOH . F 6 HOH A 21 521 26 HOH HOH . F 6 HOH A 22 522 27 HOH HOH . F 6 HOH A 23 523 28 HOH HOH . F 6 HOH A 24 524 29 HOH HOH . F 6 HOH A 25 525 31 HOH HOH . F 6 HOH A 26 526 32 HOH HOH . F 6 HOH A 27 527 33 HOH HOH . F 6 HOH A 28 528 34 HOH HOH . F 6 HOH A 29 529 35 HOH HOH . F 6 HOH A 30 530 36 HOH HOH . F 6 HOH A 31 531 38 HOH HOH . F 6 HOH A 32 532 40 HOH HOH . F 6 HOH A 33 533 41 HOH HOH . F 6 HOH A 34 534 42 HOH HOH . F 6 HOH A 35 535 43 HOH HOH . F 6 HOH A 36 536 44 HOH HOH . F 6 HOH A 37 537 45 HOH HOH . F 6 HOH A 38 538 46 HOH HOH . F 6 HOH A 39 539 47 HOH HOH . F 6 HOH A 40 540 48 HOH HOH . F 6 HOH A 41 541 49 HOH HOH . F 6 HOH A 42 542 50 HOH HOH . F 6 HOH A 43 543 51 HOH HOH . F 6 HOH A 44 544 52 HOH HOH . F 6 HOH A 45 545 53 HOH HOH . F 6 HOH A 46 546 54 HOH HOH . F 6 HOH A 47 547 56 HOH HOH . F 6 HOH A 48 548 57 HOH HOH . F 6 HOH A 49 549 58 HOH HOH . F 6 HOH A 50 550 59 HOH HOH . F 6 HOH A 51 551 60 HOH HOH . F 6 HOH A 52 552 61 HOH HOH . F 6 HOH A 53 553 62 HOH HOH . F 6 HOH A 54 554 63 HOH HOH . F 6 HOH A 55 555 66 HOH HOH . F 6 HOH A 56 556 67 HOH HOH . F 6 HOH A 57 557 68 HOH HOH . F 6 HOH A 58 558 71 HOH HOH . F 6 HOH A 59 559 72 HOH HOH . F 6 HOH A 60 560 73 HOH HOH . F 6 HOH A 61 561 74 HOH HOH . F 6 HOH A 62 562 75 HOH HOH . F 6 HOH A 63 563 77 HOH HOH . F 6 HOH A 64 564 78 HOH HOH . F 6 HOH A 65 565 79 HOH HOH . F 6 HOH A 66 566 80 HOH HOH . F 6 HOH A 67 567 81 HOH HOH . F 6 HOH A 68 568 82 HOH HOH . F 6 HOH A 69 569 84 HOH HOH . F 6 HOH A 70 570 85 HOH HOH . F 6 HOH A 71 571 86 HOH HOH . F 6 HOH A 72 572 87 HOH HOH . F 6 HOH A 73 573 89 HOH HOH . F 6 HOH A 74 574 90 HOH HOH . F 6 HOH A 75 575 92 HOH HOH . F 6 HOH A 76 576 93 HOH HOH . F 6 HOH A 77 577 94 HOH HOH . F 6 HOH A 78 578 95 HOH HOH . F 6 HOH A 79 579 97 HOH HOH . F 6 HOH A 80 580 103 HOH HOH . F 6 HOH A 81 581 104 HOH HOH . F 6 HOH A 82 582 107 HOH HOH . F 6 HOH A 83 583 108 HOH HOH . F 6 HOH A 84 584 109 HOH HOH . F 6 HOH A 85 585 110 HOH HOH . F 6 HOH A 86 586 111 HOH HOH . F 6 HOH A 87 587 112 HOH HOH . F 6 HOH A 88 588 114 HOH HOH . F 6 HOH A 89 589 115 HOH HOH . F 6 HOH A 90 590 118 HOH HOH . F 6 HOH A 91 591 121 HOH HOH . F 6 HOH A 92 592 123 HOH HOH . F 6 HOH A 93 593 124 HOH HOH . F 6 HOH A 94 594 126 HOH HOH . F 6 HOH A 95 595 129 HOH HOH . F 6 HOH A 96 596 131 HOH HOH . F 6 HOH A 97 597 133 HOH HOH . F 6 HOH A 98 598 134 HOH HOH . F 6 HOH A 99 599 136 HOH HOH . F 6 HOH A 100 600 137 HOH HOH . F 6 HOH A 101 601 138 HOH HOH . F 6 HOH A 102 602 139 HOH HOH . F 6 HOH A 103 603 143 HOH HOH . F 6 HOH A 104 604 149 HOH HOH . F 6 HOH A 105 605 150 HOH HOH . F 6 HOH A 106 606 156 HOH HOH . F 6 HOH A 107 607 157 HOH HOH . F 6 HOH A 108 608 158 HOH HOH . F 6 HOH A 109 609 159 HOH HOH . F 6 HOH A 110 610 164 HOH HOH . F 6 HOH A 111 611 167 HOH HOH . F 6 HOH A 112 612 170 HOH HOH . F 6 HOH A 113 613 173 HOH HOH . F 6 HOH A 114 614 174 HOH HOH . F 6 HOH A 115 615 176 HOH HOH . F 6 HOH A 116 616 177 HOH HOH . F 6 HOH A 117 617 178 HOH HOH . F 6 HOH A 118 618 179 HOH HOH . F 6 HOH A 119 619 180 HOH HOH . F 6 HOH A 120 620 182 HOH HOH . F 6 HOH A 121 621 184 HOH HOH . F 6 HOH A 122 622 185 HOH HOH . F 6 HOH A 123 623 186 HOH HOH . F 6 HOH A 124 624 187 HOH HOH . F 6 HOH A 125 625 188 HOH HOH . F 6 HOH A 126 626 189 HOH HOH . F 6 HOH A 127 627 191 HOH HOH . F 6 HOH A 128 628 192 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ASD . . . E 5 -28.107 27.426 18.329 1 32.33 ? C1 ASD 404 A 1 HETATM 2 C C10 ASD . . . E 5 -26.857 26.656 18.776 1 34.27 ? C10 ASD 404 A 1 HETATM 3 C C11 ASD . . . E 5 -27.141 27.472 21.183 1 38.13 ? C11 ASD 404 A 1 HETATM 4 C C12 ASD . . . E 5 -26.62 28.448 22.244 1 39.64 ? C12 ASD 404 A 1 HETATM 5 C C13 ASD . . . E 5 -25.197 28.088 22.62 1 36.89 ? C13 ASD 404 A 1 HETATM 6 C C14 ASD . . . E 5 -24.364 28.127 21.352 1 36.72 ? C14 ASD 404 A 1 HETATM 7 C C15 ASD . . . E 5 -22.924 28.121 21.876 1 37.85 ? C15 ASD 404 A 1 HETATM 8 C C16 ASD . . . E 5 -22.986 29.031 23.118 1 36.82 ? C16 ASD 404 A 1 HETATM 9 C C17 ASD . . . E 5 -24.461 29.086 23.436 1 35.51 ? C17 ASD 404 A 1 HETATM 10 C C18 ASD . . . E 5 -25.093 26.797 23.429 1 35.77 ? C18 ASD 404 A 1 HETATM 11 C C19 ASD . . . E 5 -27.21 25.241 19.211 1 33.14 ? C19 ASD 404 A 1 HETATM 12 C C2 ASD . . . E 5 -28.575 27.225 16.893 1 30.9 ? C2 ASD 404 A 1 HETATM 13 C C3 ASD . . . E 5 -27.46 27.122 15.902 1 33.4 ? C3 ASD 404 A 1 HETATM 14 C C4 ASD . . . E 5 -26.102 26.757 16.362 1 37.68 ? C4 ASD 404 A 1 HETATM 15 C C5 ASD . . . E 5 -25.828 26.531 17.667 1 36.02 ? C5 ASD 404 A 1 HETATM 16 C C6 ASD . . . E 5 -24.434 26.115 18.051 1 33.42 ? C6 ASD 404 A 1 HETATM 17 C C7 ASD . . . E 5 -23.928 27.107 19.084 1 35.64 ? C7 ASD 404 A 1 HETATM 18 C C8 ASD . . . E 5 -24.825 27.107 20.31 1 33.99 ? C8 ASD 404 A 1 HETATM 19 C C9 ASD . . . E 5 -26.254 27.479 19.93 1 36.07 ? C9 ASD 404 A 1 HETATM 20 O O1 ASD . . . E 5 -27.697 27.327 14.718 1 36.92 ? O1 ASD 404 A 1 HETATM 21 O O2 ASD . . . E 5 -25 29.834 24.227 1 39.77 ? O2 ASD 404 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #