data_4QDF
#
_model_server_result.job_id            HNohsvd3hh3LsHSQLSHQ3Q 
_model_server_result.datetime_utc      '2024-10-12 06:25:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4qdf 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":402}' 
#
_entry.id    4QDF 
#
_exptl.entry_id    4QDF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              55.845 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4QDF 
_cell.length_a            273.68 
_cell.length_b            273.68 
_cell.length_c            273.68 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QDF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        196 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'F 2 3' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,K 1 1,2,3 
B,G,H,I,J,L 2 1,4,5 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 
3 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 
4 'crystal symmetry operation' 22_545 -y,z-1/2,-x+1/2 0 -1 0 0 0 1 -1 0 0 0 -136.84 136.84 
5 'crystal symmetry operation' 31_555 -z+1/2,-x,y+1/2 0 0 -1 -1 0 0 0 1 0 136.84 0 136.84 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 73 A CYS 73 1_555 C FE2 FES . A FES 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? 
metalc ? metalc2 A ND1 HIS 75 A HIS 75 1_555 C FE1 FES . A FES 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? 
metalc ? metalc3 A SG CYS 92 A CYS 92 1_555 C FE2 FES . A FES 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? 
metalc ? metalc4 A ND1 HIS 95 A HIS 95 1_555 C FE1 FES . A FES 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? 
metalc ? metalc5 A NE2 HIS 187 A HIS 187 1_555 D FE FE2 . A FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc6 A NE2 HIS 192 A HIS 192 1_555 D FE FE2 . A FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc7 A OD2 ASP 311 A ASP 311 1_555 D FE FE2 . A FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc8 A OD1 ASP 311 A ASP 311 1_555 D FE FE2 . A FE2 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? 
metalc ? metalc9 D FE FE2 . A FE2 402 1_555 K O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.931 ? 
metalc ? metalc10 D FE FE2 . A FE2 402 1_555 K O HOH . A HOH 621 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? 
metalc ? metalc11 B SG CYS 68 B CYS 68 1_555 H FE2 FES . B FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc12 B ND1 HIS 70 B HIS 70 1_555 H FE1 FES . B FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.964 ? 
metalc ? metalc13 B SG CYS 87 B CYS 87 1_555 H FE2 FES . B FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? 
metalc ? metalc14 B ND1 HIS 90 B HIS 90 1_555 H FE1 FES . B FES 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.088 ? 
metalc ? metalc15 B NE2 HIS 186 B HIS 186 1_555 G FE FE2 . B FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc16 B OD1 ASP 305 B ASP 305 1_555 G FE FE2 . B FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? 
metalc ? metalc17 B OD2 ASP 305 B ASP 305 1_555 G FE FE2 . B FE2 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? 
metalc ? metalc18 G FE FE2 . B FE2 401 1_555 L O HOH . B HOH 533 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.876 ? 
#
_chem_comp.formula           'Fe 2' 
_chem_comp.formula_weight    55.845 
_chem_comp.id                FE2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4QDF 
_atom_sites.fract_transf_matrix[1][1]    0.003654 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.003654 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003654 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FES A 1 401 400 FES FES . 
D 4 FE2 A 1 402 401 FE2 FE2 . 
E 5 GOL A 1 403 1 GOL GOL . 
F 6 PG4 A 1 404 1 PG4 PG4 . 
G 4 FE2 B 1 401 401 FE2 FE2 . 
H 3 FES B 1 402 400 FES FES . 
I 7 30Q B 1 403 1 30Q 30Q . 
J 8 PO4 B 1 404 1 PO4 PO4 . 
K 9 HOH A 1 501 2 HOH HOH . 
K 9 HOH A 2 502 3 HOH HOH . 
K 9 HOH A 3 503 7 HOH HOH . 
K 9 HOH A 4 504 9 HOH HOH . 
K 9 HOH A 5 505 18 HOH HOH . 
K 9 HOH A 6 506 24 HOH HOH . 
K 9 HOH A 7 507 29 HOH HOH . 
K 9 HOH A 8 508 34 HOH HOH . 
K 9 HOH A 9 509 43 HOH HOH . 
K 9 HOH A 10 510 45 HOH HOH . 
K 9 HOH A 11 511 46 HOH HOH . 
K 9 HOH A 12 512 50 HOH HOH . 
K 9 HOH A 13 513 62 HOH HOH . 
K 9 HOH A 14 514 63 HOH HOH . 
K 9 HOH A 15 515 67 HOH HOH . 
K 9 HOH A 16 516 68 HOH HOH . 
K 9 HOH A 17 517 73 HOH HOH . 
K 9 HOH A 18 518 80 HOH HOH . 
K 9 HOH A 19 519 81 HOH HOH . 
K 9 HOH A 20 520 84 HOH HOH . 
K 9 HOH A 21 521 85 HOH HOH . 
K 9 HOH A 22 522 99 HOH HOH . 
K 9 HOH A 23 523 100 HOH HOH . 
K 9 HOH A 24 524 108 HOH HOH . 
K 9 HOH A 25 525 121 HOH HOH . 
K 9 HOH A 26 526 123 HOH HOH . 
K 9 HOH A 27 527 125 HOH HOH . 
K 9 HOH A 28 528 128 HOH HOH . 
K 9 HOH A 29 529 134 HOH HOH . 
K 9 HOH A 30 530 135 HOH HOH . 
K 9 HOH A 31 531 148 HOH HOH . 
K 9 HOH A 32 532 192 HOH HOH . 
K 9 HOH A 33 533 235 HOH HOH . 
K 9 HOH A 34 534 249 HOH HOH . 
K 9 HOH A 35 535 251 HOH HOH . 
K 9 HOH A 36 536 252 HOH HOH . 
K 9 HOH A 37 537 253 HOH HOH . 
K 9 HOH A 38 538 254 HOH HOH . 
K 9 HOH A 39 539 255 HOH HOH . 
K 9 HOH A 40 540 256 HOH HOH . 
K 9 HOH A 41 541 257 HOH HOH . 
K 9 HOH A 42 542 258 HOH HOH . 
K 9 HOH A 43 543 260 HOH HOH . 
K 9 HOH A 44 544 261 HOH HOH . 
K 9 HOH A 45 545 262 HOH HOH . 
K 9 HOH A 46 546 263 HOH HOH . 
K 9 HOH A 47 547 264 HOH HOH . 
K 9 HOH A 48 548 265 HOH HOH . 
K 9 HOH A 49 549 269 HOH HOH . 
K 9 HOH A 50 550 271 HOH HOH . 
K 9 HOH A 51 551 274 HOH HOH . 
K 9 HOH A 52 552 275 HOH HOH . 
K 9 HOH A 53 553 276 HOH HOH . 
K 9 HOH A 54 554 277 HOH HOH . 
K 9 HOH A 55 555 279 HOH HOH . 
K 9 HOH A 56 556 281 HOH HOH . 
K 9 HOH A 57 557 282 HOH HOH . 
K 9 HOH A 58 558 283 HOH HOH . 
K 9 HOH A 59 559 286 HOH HOH . 
K 9 HOH A 60 560 288 HOH HOH . 
K 9 HOH A 61 561 290 HOH HOH . 
K 9 HOH A 62 562 291 HOH HOH . 
K 9 HOH A 63 563 293 HOH HOH . 
K 9 HOH A 64 564 294 HOH HOH . 
K 9 HOH A 65 565 296 HOH HOH . 
K 9 HOH A 66 566 298 HOH HOH . 
K 9 HOH A 67 567 299 HOH HOH . 
K 9 HOH A 68 568 300 HOH HOH . 
K 9 HOH A 69 569 301 HOH HOH . 
K 9 HOH A 70 570 302 HOH HOH . 
K 9 HOH A 71 571 303 HOH HOH . 
K 9 HOH A 72 572 305 HOH HOH . 
K 9 HOH A 73 573 307 HOH HOH . 
K 9 HOH A 74 574 309 HOH HOH . 
K 9 HOH A 75 575 310 HOH HOH . 
K 9 HOH A 76 576 312 HOH HOH . 
K 9 HOH A 77 577 315 HOH HOH . 
K 9 HOH A 78 578 316 HOH HOH . 
K 9 HOH A 79 579 317 HOH HOH . 
K 9 HOH A 80 580 319 HOH HOH . 
K 9 HOH A 81 581 320 HOH HOH . 
K 9 HOH A 82 582 322 HOH HOH . 
K 9 HOH A 83 583 327 HOH HOH . 
K 9 HOH A 84 584 328 HOH HOH . 
K 9 HOH A 85 585 329 HOH HOH . 
K 9 HOH A 86 586 330 HOH HOH . 
K 9 HOH A 87 587 331 HOH HOH . 
K 9 HOH A 88 588 332 HOH HOH . 
K 9 HOH A 89 589 333 HOH HOH . 
K 9 HOH A 90 590 334 HOH HOH . 
K 9 HOH A 91 591 335 HOH HOH . 
K 9 HOH A 92 592 336 HOH HOH . 
K 9 HOH A 93 593 337 HOH HOH . 
K 9 HOH A 94 594 338 HOH HOH . 
K 9 HOH A 95 595 340 HOH HOH . 
K 9 HOH A 96 596 342 HOH HOH . 
K 9 HOH A 97 597 344 HOH HOH . 
K 9 HOH A 98 598 345 HOH HOH . 
K 9 HOH A 99 599 346 HOH HOH . 
K 9 HOH A 100 600 347 HOH HOH . 
K 9 HOH A 101 601 349 HOH HOH . 
K 9 HOH A 102 602 352 HOH HOH . 
K 9 HOH A 103 603 353 HOH HOH . 
K 9 HOH A 104 604 354 HOH HOH . 
K 9 HOH A 105 605 355 HOH HOH . 
K 9 HOH A 106 606 360 HOH HOH . 
K 9 HOH A 107 607 369 HOH HOH . 
K 9 HOH A 108 608 371 HOH HOH . 
K 9 HOH A 109 609 373 HOH HOH . 
K 9 HOH A 110 610 375 HOH HOH . 
K 9 HOH A 111 611 377 HOH HOH . 
K 9 HOH A 112 612 378 HOH HOH . 
K 9 HOH A 113 613 379 HOH HOH . 
K 9 HOH A 114 614 383 HOH HOH . 
K 9 HOH A 115 615 384 HOH HOH . 
K 9 HOH A 116 616 389 HOH HOH . 
K 9 HOH A 117 617 391 HOH HOH . 
K 9 HOH A 118 618 397 HOH HOH . 
K 9 HOH A 119 619 400 HOH HOH . 
K 9 HOH A 120 620 401 HOH HOH . 
K 9 HOH A 121 621 402 HOH HOH . 
L 9 HOH B 1 501 1 HOH HOH . 
L 9 HOH B 2 502 5 HOH HOH . 
L 9 HOH B 3 503 6 HOH HOH . 
L 9 HOH B 4 504 10 HOH HOH . 
L 9 HOH B 5 505 12 HOH HOH . 
L 9 HOH B 6 506 21 HOH HOH . 
L 9 HOH B 7 507 26 HOH HOH . 
L 9 HOH B 8 508 31 HOH HOH . 
L 9 HOH B 9 509 35 HOH HOH . 
L 9 HOH B 10 510 47 HOH HOH . 
L 9 HOH B 11 511 48 HOH HOH . 
L 9 HOH B 12 512 49 HOH HOH . 
L 9 HOH B 13 513 51 HOH HOH . 
L 9 HOH B 14 514 53 HOH HOH . 
L 9 HOH B 15 515 55 HOH HOH . 
L 9 HOH B 16 516 64 HOH HOH . 
L 9 HOH B 17 517 98 HOH HOH . 
L 9 HOH B 18 518 104 HOH HOH . 
L 9 HOH B 19 519 136 HOH HOH . 
L 9 HOH B 20 520 138 HOH HOH . 
L 9 HOH B 21 521 144 HOH HOH . 
L 9 HOH B 22 522 153 HOH HOH . 
L 9 HOH B 23 523 154 HOH HOH . 
L 9 HOH B 24 524 155 HOH HOH . 
L 9 HOH B 25 525 161 HOH HOH . 
L 9 HOH B 26 526 167 HOH HOH . 
L 9 HOH B 27 527 183 HOH HOH . 
L 9 HOH B 28 528 202 HOH HOH . 
L 9 HOH B 29 529 250 HOH HOH . 
L 9 HOH B 30 530 259 HOH HOH . 
L 9 HOH B 31 531 266 HOH HOH . 
L 9 HOH B 32 532 270 HOH HOH . 
L 9 HOH B 33 533 272 HOH HOH . 
L 9 HOH B 34 534 273 HOH HOH . 
L 9 HOH B 35 535 278 HOH HOH . 
L 9 HOH B 36 536 280 HOH HOH . 
L 9 HOH B 37 537 284 HOH HOH . 
L 9 HOH B 38 538 285 HOH HOH . 
L 9 HOH B 39 539 287 HOH HOH . 
L 9 HOH B 40 540 289 HOH HOH . 
L 9 HOH B 41 541 292 HOH HOH . 
L 9 HOH B 42 542 295 HOH HOH . 
L 9 HOH B 43 543 297 HOH HOH . 
L 9 HOH B 44 544 304 HOH HOH . 
L 9 HOH B 45 545 306 HOH HOH . 
L 9 HOH B 46 546 308 HOH HOH . 
L 9 HOH B 47 547 311 HOH HOH . 
L 9 HOH B 48 548 313 HOH HOH . 
L 9 HOH B 49 549 314 HOH HOH . 
L 9 HOH B 50 550 318 HOH HOH . 
L 9 HOH B 51 551 321 HOH HOH . 
L 9 HOH B 52 552 323 HOH HOH . 
L 9 HOH B 53 553 324 HOH HOH . 
L 9 HOH B 54 554 325 HOH HOH . 
L 9 HOH B 55 555 326 HOH HOH . 
L 9 HOH B 56 556 339 HOH HOH . 
L 9 HOH B 57 557 343 HOH HOH . 
L 9 HOH B 58 558 358 HOH HOH . 
L 9 HOH B 59 559 359 HOH HOH . 
L 9 HOH B 60 560 361 HOH HOH . 
L 9 HOH B 61 561 363 HOH HOH . 
L 9 HOH B 62 562 365 HOH HOH . 
L 9 HOH B 63 563 366 HOH HOH . 
L 9 HOH B 64 564 367 HOH HOH . 
L 9 HOH B 65 565 368 HOH HOH . 
L 9 HOH B 66 566 370 HOH HOH . 
L 9 HOH B 67 567 374 HOH HOH . 
L 9 HOH B 68 568 376 HOH HOH . 
L 9 HOH B 69 569 380 HOH HOH . 
L 9 HOH B 70 570 381 HOH HOH . 
L 9 HOH B 71 571 385 HOH HOH . 
L 9 HOH B 72 572 386 HOH HOH . 
L 9 HOH B 73 573 388 HOH HOH . 
L 9 HOH B 74 574 390 HOH HOH . 
L 9 HOH B 75 575 392 HOH HOH . 
L 9 HOH B 76 576 393 HOH HOH . 
L 9 HOH B 77 577 394 HOH HOH . 
L 9 HOH B 78 578 395 HOH HOH . 
L 9 HOH B 79 579 398 HOH HOH . 
L 9 HOH B 80 580 399 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           FE 
_atom_site.label_atom_id         FE 
_atom_site.label_comp_id         FE2 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -26.048 
_atom_site.Cartn_y               -10.353 
_atom_site.Cartn_z               53.716 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        33.64 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          FE 
_atom_site.auth_comp_id          FE2 
_atom_site.auth_seq_id           402 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           317 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#