data_4QE8
#
_model_server_result.job_id            m1h55FTifli_NEkeo0Zu3A 
_model_server_result.datetime_utc      '2024-10-28 02:29:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4qe8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1004}' 
#
_entry.id    4QE8 
#
_exptl.entry_id    4QE8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         88.89 
_cell.angle_beta          78.1 
_cell.angle_gamma         85.07 
_cell.entry_id            4QE8 
_cell.length_a            34.483 
_cell.length_b            48.683 
_cell.length_c            82.201 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QE8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,H,I,O,Q 1 1 
B,D,J,K,L,M,N,P,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 140 n n 
C1 C2 EDO sing 141 n n 
C1 H11 EDO sing 142 n n 
C1 H12 EDO sing 143 n n 
O1 HO1 EDO sing 144 n n 
C2 O2 EDO sing 145 n n 
C2 H21 EDO sing 146 n n 
C2 H22 EDO sing 147 n n 
O2 HO2 EDO sing 148 n n 
#
_atom_sites.entry_id                     4QE8 
_atom_sites.fract_transf_matrix[1][1]    0.029 
_atom_sites.fract_transf_matrix[1][2]    -0.002501 
_atom_sites.fract_transf_matrix[1][3]    -0.006107 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020617 
_atom_sites.fract_transf_matrix[2][3]    -0.000035 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012433 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 31D A 1 1001 1001 31D 31D . 
F 4 EDO A 1 1002 1002 EDO EDO . 
G 4 EDO A 1 1003 1003 EDO EDO . 
H 4 EDO A 1 1004 1004 EDO EDO . 
I 4 EDO A 1 1005 1005 EDO EDO . 
J 3 31D B 1 1001 1001 31D 31D . 
K 4 EDO B 1 1002 1002 EDO EDO . 
L 4 EDO B 1 1003 1003 EDO EDO . 
M 4 EDO B 1 1004 1004 EDO EDO . 
N 5 MRD B 1 1005 1005 MRD MRD . 
O 6 HOH A 1 1101 1101 HOH HOH . 
O 6 HOH A 2 1102 1102 HOH HOH . 
O 6 HOH A 3 1103 1103 HOH HOH . 
O 6 HOH A 4 1104 1104 HOH HOH . 
O 6 HOH A 5 1105 1105 HOH HOH . 
O 6 HOH A 6 1106 1106 HOH HOH . 
O 6 HOH A 7 1107 1107 HOH HOH . 
O 6 HOH A 8 1108 1108 HOH HOH . 
O 6 HOH A 9 1109 1109 HOH HOH . 
O 6 HOH A 10 1110 1110 HOH HOH . 
O 6 HOH A 11 1111 1111 HOH HOH . 
O 6 HOH A 12 1112 1112 HOH HOH . 
O 6 HOH A 13 1113 1113 HOH HOH . 
O 6 HOH A 14 1114 1115 HOH HOH . 
O 6 HOH A 15 1115 1118 HOH HOH . 
O 6 HOH A 16 1116 1119 HOH HOH . 
O 6 HOH A 17 1117 1120 HOH HOH . 
O 6 HOH A 18 1118 1121 HOH HOH . 
O 6 HOH A 19 1119 1122 HOH HOH . 
O 6 HOH A 20 1120 1123 HOH HOH . 
O 6 HOH A 21 1121 1124 HOH HOH . 
O 6 HOH A 22 1122 1125 HOH HOH . 
O 6 HOH A 23 1123 1126 HOH HOH . 
O 6 HOH A 24 1124 1128 HOH HOH . 
O 6 HOH A 25 1125 1129 HOH HOH . 
O 6 HOH A 26 1126 1130 HOH HOH . 
O 6 HOH A 27 1127 1132 HOH HOH . 
O 6 HOH A 28 1128 1133 HOH HOH . 
O 6 HOH A 29 1129 1134 HOH HOH . 
O 6 HOH A 30 1130 1135 HOH HOH . 
O 6 HOH A 31 1131 1136 HOH HOH . 
O 6 HOH A 32 1132 1137 HOH HOH . 
O 6 HOH A 33 1133 1138 HOH HOH . 
O 6 HOH A 34 1134 1139 HOH HOH . 
O 6 HOH A 35 1135 1142 HOH HOH . 
O 6 HOH A 36 1136 1144 HOH HOH . 
O 6 HOH A 37 1137 1145 HOH HOH . 
O 6 HOH A 38 1138 1148 HOH HOH . 
O 6 HOH A 39 1139 1149 HOH HOH . 
O 6 HOH A 40 1140 1150 HOH HOH . 
O 6 HOH A 41 1141 1151 HOH HOH . 
O 6 HOH A 42 1142 1152 HOH HOH . 
O 6 HOH A 43 1143 1153 HOH HOH . 
O 6 HOH A 44 1144 1155 HOH HOH . 
O 6 HOH A 45 1145 1159 HOH HOH . 
O 6 HOH A 46 1146 1161 HOH HOH . 
O 6 HOH A 47 1147 1162 HOH HOH . 
O 6 HOH A 48 1148 1163 HOH HOH . 
O 6 HOH A 49 1149 1164 HOH HOH . 
O 6 HOH A 50 1150 1165 HOH HOH . 
O 6 HOH A 51 1151 1166 HOH HOH . 
O 6 HOH A 52 1152 1167 HOH HOH . 
P 6 HOH B 1 1101 1101 HOH HOH . 
P 6 HOH B 2 1102 1102 HOH HOH . 
P 6 HOH B 3 1103 1103 HOH HOH . 
P 6 HOH B 4 1104 1104 HOH HOH . 
P 6 HOH B 5 1105 1105 HOH HOH . 
P 6 HOH B 6 1106 1106 HOH HOH . 
P 6 HOH B 7 1107 1109 HOH HOH . 
P 6 HOH B 8 1108 1111 HOH HOH . 
P 6 HOH B 9 1109 1112 HOH HOH . 
P 6 HOH B 10 1110 1114 HOH HOH . 
P 6 HOH B 11 1111 1116 HOH HOH . 
P 6 HOH B 12 1112 1117 HOH HOH . 
P 6 HOH B 13 1113 1118 HOH HOH . 
P 6 HOH B 14 1114 1119 HOH HOH . 
P 6 HOH B 15 1115 1120 HOH HOH . 
P 6 HOH B 16 1116 1122 HOH HOH . 
P 6 HOH B 17 1117 1124 HOH HOH . 
P 6 HOH B 18 1118 1125 HOH HOH . 
P 6 HOH B 19 1119 1126 HOH HOH . 
P 6 HOH B 20 1120 1127 HOH HOH . 
P 6 HOH B 21 1121 1128 HOH HOH . 
P 6 HOH B 22 1122 1129 HOH HOH . 
P 6 HOH B 23 1123 1130 HOH HOH . 
P 6 HOH B 24 1124 1131 HOH HOH . 
P 6 HOH B 25 1125 1132 HOH HOH . 
P 6 HOH B 26 1126 1133 HOH HOH . 
P 6 HOH B 27 1127 1134 HOH HOH . 
P 6 HOH B 28 1128 1135 HOH HOH . 
P 6 HOH B 29 1129 1136 HOH HOH . 
P 6 HOH B 30 1130 1140 HOH HOH . 
P 6 HOH B 31 1131 1141 HOH HOH . 
P 6 HOH B 32 1132 1142 HOH HOH . 
P 6 HOH B 33 1133 1143 HOH HOH . 
P 6 HOH B 34 1134 1144 HOH HOH . 
P 6 HOH B 35 1135 1145 HOH HOH . 
P 6 HOH B 36 1136 1146 HOH HOH . 
P 6 HOH B 37 1137 1147 HOH HOH . 
P 6 HOH B 38 1138 1148 HOH HOH . 
P 6 HOH B 39 1139 1149 HOH HOH . 
P 6 HOH B 40 1140 1150 HOH HOH . 
P 6 HOH B 41 1141 1151 HOH HOH . 
P 6 HOH B 42 1142 1152 HOH HOH . 
P 6 HOH B 43 1143 1154 HOH HOH . 
P 6 HOH B 44 1144 1156 HOH HOH . 
P 6 HOH B 45 1145 1157 HOH HOH . 
P 6 HOH B 46 1146 1159 HOH HOH . 
P 6 HOH B 47 1147 1160 HOH HOH . 
P 6 HOH B 48 1148 1161 HOH HOH . 
P 6 HOH B 49 1149 1162 HOH HOH . 
P 6 HOH B 50 1150 1165 HOH HOH . 
P 6 HOH B 51 1151 1166 HOH HOH . 
P 6 HOH B 52 1152 1168 HOH HOH . 
P 6 HOH B 53 1153 1169 HOH HOH . 
P 6 HOH B 54 1154 1172 HOH HOH . 
Q 6 HOH C 1 801 802 HOH HOH . 
Q 6 HOH C 2 802 805 HOH HOH . 
Q 6 HOH C 3 803 806 HOH HOH . 
Q 6 HOH C 4 804 807 HOH HOH . 
Q 6 HOH C 5 805 808 HOH HOH . 
R 6 HOH D 1 801 801 HOH HOH . 
R 6 HOH D 2 802 802 HOH HOH . 
R 6 HOH D 3 803 803 HOH HOH . 
R 6 HOH D 4 804 806 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . H 4 -0.377 6.873 19.601 1 45.37 ? C1 EDO 1004 A 1 
HETATM 2 O O1 EDO . . . H 4 -1.029 6.285 20.733 1 46.48 ? O1 EDO 1004 A 1 
HETATM 3 C C2 EDO . . . H 4 -0.095 5.797 18.557 1 43.76 ? C2 EDO 1004 A 1 
HETATM 4 O O2 EDO . . . H 4 -1.328 5.2 18.137 1 42.44 ? O2 EDO 1004 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           234 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#