data_4QEV
#
_model_server_result.job_id            xyrYWHOTJdmUv6FrrPIBfA 
_model_server_result.datetime_utc      '2024-11-13 11:06:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4qev 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    4QEV 
#
_exptl.entry_id    4QEV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4QEV 
_cell.length_a            52.516 
_cell.length_b            71.468 
_cell.length_c            32.067 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QEV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F 1 1 
A,B,C,D,E,F 2 1,2 
A,B,C,D,E,F 3 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_755 -x+2,-y,z -1 0 0 0 -1 0 0 0 1 105.032 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     4QEV 
_atom_sites.fract_transf_matrix[1][1]    0.019042 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013992 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.031185 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 31O A 1 501 1 31O DRG . 
C 3 2PE A 1 502 2 2PE 2PE . 
D 4 NI A 1 503 3 NI NI . 
E 5 GOL A 1 504 4 GOL GOL . 
F 6 HOH A 1 601 1 HOH HOH . 
F 6 HOH A 2 602 2 HOH HOH . 
F 6 HOH A 3 603 3 HOH HOH . 
F 6 HOH A 4 604 4 HOH HOH . 
F 6 HOH A 5 605 5 HOH HOH . 
F 6 HOH A 6 606 6 HOH HOH . 
F 6 HOH A 7 607 7 HOH HOH . 
F 6 HOH A 8 608 8 HOH HOH . 
F 6 HOH A 9 609 9 HOH HOH . 
F 6 HOH A 10 610 10 HOH HOH . 
F 6 HOH A 11 611 11 HOH HOH . 
F 6 HOH A 12 612 12 HOH HOH . 
F 6 HOH A 13 613 13 HOH HOH . 
F 6 HOH A 14 614 14 HOH HOH . 
F 6 HOH A 15 615 15 HOH HOH . 
F 6 HOH A 16 616 16 HOH HOH . 
F 6 HOH A 17 617 17 HOH HOH . 
F 6 HOH A 18 618 18 HOH HOH . 
F 6 HOH A 19 619 19 HOH HOH . 
F 6 HOH A 20 620 20 HOH HOH . 
F 6 HOH A 21 621 21 HOH HOH . 
F 6 HOH A 22 622 22 HOH HOH . 
F 6 HOH A 23 623 23 HOH HOH . 
F 6 HOH A 24 624 24 HOH HOH . 
F 6 HOH A 25 625 25 HOH HOH . 
F 6 HOH A 26 626 26 HOH HOH . 
F 6 HOH A 27 627 27 HOH HOH . 
F 6 HOH A 28 628 28 HOH HOH . 
F 6 HOH A 29 629 29 HOH HOH . 
F 6 HOH A 30 630 30 HOH HOH . 
F 6 HOH A 31 631 31 HOH HOH . 
F 6 HOH A 32 632 32 HOH HOH . 
F 6 HOH A 33 633 33 HOH HOH . 
F 6 HOH A 34 634 34 HOH HOH . 
F 6 HOH A 35 635 35 HOH HOH . 
F 6 HOH A 36 636 36 HOH HOH . 
F 6 HOH A 37 637 37 HOH HOH . 
F 6 HOH A 38 638 38 HOH HOH . 
F 6 HOH A 39 639 39 HOH HOH . 
F 6 HOH A 40 640 40 HOH HOH . 
F 6 HOH A 41 641 41 HOH HOH . 
F 6 HOH A 42 642 42 HOH HOH . 
F 6 HOH A 43 643 43 HOH HOH . 
F 6 HOH A 44 644 44 HOH HOH . 
F 6 HOH A 45 645 45 HOH HOH . 
F 6 HOH A 46 646 46 HOH HOH . 
F 6 HOH A 47 647 47 HOH HOH . 
F 6 HOH A 48 648 48 HOH HOH . 
F 6 HOH A 49 649 49 HOH HOH . 
F 6 HOH A 50 650 50 HOH HOH . 
F 6 HOH A 51 651 51 HOH HOH . 
F 6 HOH A 52 652 52 HOH HOH . 
F 6 HOH A 53 653 53 HOH HOH . 
F 6 HOH A 54 654 54 HOH HOH . 
F 6 HOH A 55 655 55 HOH HOH . 
F 6 HOH A 56 656 56 HOH HOH . 
F 6 HOH A 57 657 57 HOH HOH . 
F 6 HOH A 58 658 58 HOH HOH . 
F 6 HOH A 59 659 59 HOH HOH . 
F 6 HOH A 60 660 60 HOH HOH . 
F 6 HOH A 61 661 61 HOH HOH . 
F 6 HOH A 62 662 62 HOH HOH . 
F 6 HOH A 63 663 63 HOH HOH . 
F 6 HOH A 64 664 64 HOH HOH . 
F 6 HOH A 65 665 65 HOH HOH . 
F 6 HOH A 66 666 66 HOH HOH . 
F 6 HOH A 67 667 67 HOH HOH . 
F 6 HOH A 68 668 68 HOH HOH . 
F 6 HOH A 69 669 69 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               52.515 
_atom_site.Cartn_y               0 
_atom_site.Cartn_z               59.506 
_atom_site.occupancy             0.3 
_atom_site.B_iso_or_equiv        10.81 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           503 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           285 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#