data_4QF1 # _model_server_result.job_id rs7cgyqHN8ZwGKC-M3VQNg _model_server_result.datetime_utc '2024-11-23 13:02:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qf1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":301}' # _entry.id 4QF1 # _exptl.entry_id 4QF1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.84 _cell.angle_gamma 90 _cell.entry_id 4QF1 _cell.length_a 76.332 _cell.length_b 70.803 _cell.length_c 107.314 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QF1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,M,N 1 1 C,D,H,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf2 A SG CYS 147 H CYS 140 1_555 A SG CYS 203 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 B SG CYS 22 L CYS 23 1_555 B SG CYS 87 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf4 B SG CYS 136 L CYS 134 1_555 B SG CYS 195 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf5 C SG CYS 22 A CYS 22 1_555 C SG CYS 96 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf6 C SG CYS 147 A CYS 140 1_555 C SG CYS 203 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 D SG CYS 22 B CYS 23 1_555 D SG CYS 87 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf8 D SG CYS 136 B CYS 134 1_555 D SG CYS 195 B CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 262 n n O1 HO1 PG4 sing 263 n n C1 C2 PG4 sing 264 n n C1 H11 PG4 sing 265 n n C1 H12 PG4 sing 266 n n C2 O2 PG4 sing 267 n n C2 H21 PG4 sing 268 n n C2 H22 PG4 sing 269 n n O2 C3 PG4 sing 270 n n C3 C4 PG4 sing 271 n n C3 H31 PG4 sing 272 n n C3 H32 PG4 sing 273 n n C4 O3 PG4 sing 274 n n C4 H41 PG4 sing 275 n n C4 H42 PG4 sing 276 n n O3 C5 PG4 sing 277 n n C5 C6 PG4 sing 278 n n C5 H51 PG4 sing 279 n n C5 H52 PG4 sing 280 n n C6 O4 PG4 sing 281 n n C6 H61 PG4 sing 282 n n C6 H62 PG4 sing 283 n n O4 C7 PG4 sing 284 n n C7 C8 PG4 sing 285 n n C7 H71 PG4 sing 286 n n C7 H72 PG4 sing 287 n n C8 O5 PG4 sing 288 n n C8 H81 PG4 sing 289 n n C8 H82 PG4 sing 290 n n O5 HO5 PG4 sing 291 n n # _atom_sites.entry_id 4QF1 _atom_sites.fract_transf_matrix[1][1] 0.013101 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001571 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009385 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MES H 1 301 2 MES MES . F 4 PGE L 1 301 3 PGE RH5 . G 5 CL L 1 302 2 CL CL . H 6 PG4 A 1 301 1 PG4 RH4 . I 3 MES A 1 302 1 MES MES . J 6 PG4 B 1 301 2 PG4 RH4 . K 4 PGE B 1 302 4 PGE RH5 . L 5 CL B 1 303 1 CL CL . M 7 HOH H 1 401 1 HOH HOH . M 7 HOH H 2 402 7 HOH HOH . M 7 HOH H 3 403 12 HOH HOH . M 7 HOH H 4 404 14 HOH HOH . M 7 HOH H 5 405 24 HOH HOH . M 7 HOH H 6 406 29 HOH HOH . M 7 HOH H 7 407 36 HOH HOH . M 7 HOH H 8 408 40 HOH HOH . M 7 HOH H 9 409 42 HOH HOH . M 7 HOH H 10 410 45 HOH HOH . M 7 HOH H 11 411 47 HOH HOH . M 7 HOH H 12 412 48 HOH HOH . M 7 HOH H 13 413 49 HOH HOH . M 7 HOH H 14 414 53 HOH HOH . M 7 HOH H 15 415 54 HOH HOH . M 7 HOH H 16 416 56 HOH HOH . M 7 HOH H 17 417 57 HOH HOH . M 7 HOH H 18 418 59 HOH HOH . M 7 HOH H 19 419 76 HOH HOH . M 7 HOH H 20 420 91 HOH HOH . M 7 HOH H 21 421 94 HOH HOH . M 7 HOH H 22 422 100 HOH HOH . M 7 HOH H 23 423 102 HOH HOH . M 7 HOH H 24 424 108 HOH HOH . M 7 HOH H 25 425 114 HOH HOH . M 7 HOH H 26 426 124 HOH HOH . M 7 HOH H 27 427 126 HOH HOH . M 7 HOH H 28 428 129 HOH HOH . M 7 HOH H 29 429 131 HOH HOH . M 7 HOH H 30 430 132 HOH HOH . M 7 HOH H 31 431 135 HOH HOH . M 7 HOH H 32 432 138 HOH HOH . M 7 HOH H 33 433 140 HOH HOH . M 7 HOH H 34 434 142 HOH HOH . M 7 HOH H 35 435 149 HOH HOH . M 7 HOH H 36 436 151 HOH HOH . M 7 HOH H 37 437 152 HOH HOH . M 7 HOH H 38 438 153 HOH HOH . M 7 HOH H 39 439 154 HOH HOH . M 7 HOH H 40 440 157 HOH HOH . M 7 HOH H 41 441 165 HOH HOH . M 7 HOH H 42 442 172 HOH HOH . M 7 HOH H 43 443 191 HOH HOH . M 7 HOH H 44 444 194 HOH HOH . M 7 HOH H 45 445 198 HOH HOH . M 7 HOH H 46 446 199 HOH HOH . M 7 HOH H 47 447 203 HOH HOH . M 7 HOH H 48 448 204 HOH HOH . N 7 HOH L 1 401 13 HOH HOH . N 7 HOH L 2 402 15 HOH HOH . N 7 HOH L 3 403 19 HOH HOH . N 7 HOH L 4 404 23 HOH HOH . N 7 HOH L 5 405 25 HOH HOH . N 7 HOH L 6 406 27 HOH HOH . N 7 HOH L 7 407 28 HOH HOH . N 7 HOH L 8 408 35 HOH HOH . N 7 HOH L 9 409 46 HOH HOH . N 7 HOH L 10 410 52 HOH HOH . N 7 HOH L 11 411 64 HOH HOH . N 7 HOH L 12 412 65 HOH HOH . N 7 HOH L 13 413 67 HOH HOH . N 7 HOH L 14 414 68 HOH HOH . N 7 HOH L 15 415 71 HOH HOH . N 7 HOH L 16 416 72 HOH HOH . N 7 HOH L 17 417 78 HOH HOH . N 7 HOH L 18 418 79 HOH HOH . N 7 HOH L 19 419 82 HOH HOH . N 7 HOH L 20 420 89 HOH HOH . N 7 HOH L 21 421 92 HOH HOH . N 7 HOH L 22 422 95 HOH HOH . N 7 HOH L 23 423 99 HOH HOH . N 7 HOH L 24 424 106 HOH HOH . N 7 HOH L 25 425 107 HOH HOH . N 7 HOH L 26 426 109 HOH HOH . N 7 HOH L 27 427 110 HOH HOH . N 7 HOH L 28 428 112 HOH HOH . N 7 HOH L 29 429 113 HOH HOH . N 7 HOH L 30 430 116 HOH HOH . N 7 HOH L 31 431 117 HOH HOH . N 7 HOH L 32 432 120 HOH HOH . N 7 HOH L 33 433 121 HOH HOH . N 7 HOH L 34 434 125 HOH HOH . N 7 HOH L 35 435 133 HOH HOH . N 7 HOH L 36 436 134 HOH HOH . N 7 HOH L 37 437 148 HOH HOH . N 7 HOH L 38 438 156 HOH HOH . N 7 HOH L 39 439 162 HOH HOH . N 7 HOH L 40 440 168 HOH HOH . N 7 HOH L 41 441 180 HOH HOH . N 7 HOH L 42 442 181 HOH HOH . N 7 HOH L 43 443 187 HOH HOH . N 7 HOH L 44 444 188 HOH HOH . N 7 HOH L 45 445 189 HOH HOH . N 7 HOH L 46 446 192 HOH HOH . N 7 HOH L 47 447 196 HOH HOH . N 7 HOH L 48 448 197 HOH HOH . O 7 HOH A 1 401 3 HOH HOH . O 7 HOH A 2 402 4 HOH HOH . O 7 HOH A 3 403 6 HOH HOH . O 7 HOH A 4 404 8 HOH HOH . O 7 HOH A 5 405 9 HOH HOH . O 7 HOH A 6 406 16 HOH HOH . O 7 HOH A 7 407 21 HOH HOH . O 7 HOH A 8 408 26 HOH HOH . O 7 HOH A 9 409 30 HOH HOH . O 7 HOH A 10 410 31 HOH HOH . O 7 HOH A 11 411 32 HOH HOH . O 7 HOH A 12 412 39 HOH HOH . O 7 HOH A 13 413 44 HOH HOH . O 7 HOH A 14 414 50 HOH HOH . O 7 HOH A 15 415 51 HOH HOH . O 7 HOH A 16 416 55 HOH HOH . O 7 HOH A 17 417 60 HOH HOH . O 7 HOH A 18 418 61 HOH HOH . O 7 HOH A 19 419 63 HOH HOH . O 7 HOH A 20 420 66 HOH HOH . O 7 HOH A 21 421 74 HOH HOH . O 7 HOH A 22 422 77 HOH HOH . O 7 HOH A 23 423 80 HOH HOH . O 7 HOH A 24 424 81 HOH HOH . O 7 HOH A 25 425 83 HOH HOH . O 7 HOH A 26 426 85 HOH HOH . O 7 HOH A 27 427 87 HOH HOH . O 7 HOH A 28 428 90 HOH HOH . O 7 HOH A 29 429 96 HOH HOH . O 7 HOH A 30 430 98 HOH HOH . O 7 HOH A 31 431 101 HOH HOH . O 7 HOH A 32 432 103 HOH HOH . O 7 HOH A 33 433 104 HOH HOH . O 7 HOH A 34 434 115 HOH HOH . O 7 HOH A 35 435 118 HOH HOH . O 7 HOH A 36 436 130 HOH HOH . O 7 HOH A 37 437 141 HOH HOH . O 7 HOH A 38 438 143 HOH HOH . O 7 HOH A 39 439 144 HOH HOH . O 7 HOH A 40 440 145 HOH HOH . O 7 HOH A 41 441 146 HOH HOH . O 7 HOH A 42 442 150 HOH HOH . O 7 HOH A 43 443 158 HOH HOH . O 7 HOH A 44 444 159 HOH HOH . O 7 HOH A 45 445 160 HOH HOH . O 7 HOH A 46 446 161 HOH HOH . O 7 HOH A 47 447 163 HOH HOH . O 7 HOH A 48 448 164 HOH HOH . O 7 HOH A 49 449 166 HOH HOH . O 7 HOH A 50 450 167 HOH HOH . O 7 HOH A 51 451 169 HOH HOH . O 7 HOH A 52 452 170 HOH HOH . O 7 HOH A 53 453 171 HOH HOH . O 7 HOH A 54 454 175 HOH HOH . O 7 HOH A 55 455 176 HOH HOH . O 7 HOH A 56 456 177 HOH HOH . O 7 HOH A 57 457 179 HOH HOH . O 7 HOH A 58 458 193 HOH HOH . O 7 HOH A 59 459 195 HOH HOH . O 7 HOH A 60 460 201 HOH HOH . O 7 HOH A 61 461 202 HOH HOH . P 7 HOH B 1 401 2 HOH HOH . P 7 HOH B 2 402 5 HOH HOH . P 7 HOH B 3 403 10 HOH HOH . P 7 HOH B 4 404 11 HOH HOH . P 7 HOH B 5 405 17 HOH HOH . P 7 HOH B 6 406 20 HOH HOH . P 7 HOH B 7 407 22 HOH HOH . P 7 HOH B 8 408 33 HOH HOH . P 7 HOH B 9 409 34 HOH HOH . P 7 HOH B 10 410 37 HOH HOH . P 7 HOH B 11 411 38 HOH HOH . P 7 HOH B 12 412 41 HOH HOH . P 7 HOH B 13 413 43 HOH HOH . P 7 HOH B 14 414 58 HOH HOH . P 7 HOH B 15 415 62 HOH HOH . P 7 HOH B 16 416 69 HOH HOH . P 7 HOH B 17 417 70 HOH HOH . P 7 HOH B 18 418 73 HOH HOH . P 7 HOH B 19 419 84 HOH HOH . P 7 HOH B 20 420 86 HOH HOH . P 7 HOH B 21 421 88 HOH HOH . P 7 HOH B 22 422 93 HOH HOH . P 7 HOH B 23 423 105 HOH HOH . P 7 HOH B 24 424 111 HOH HOH . P 7 HOH B 25 425 119 HOH HOH . P 7 HOH B 26 426 122 HOH HOH . P 7 HOH B 27 427 123 HOH HOH . P 7 HOH B 28 428 127 HOH HOH . P 7 HOH B 29 429 128 HOH HOH . P 7 HOH B 30 430 136 HOH HOH . P 7 HOH B 31 431 137 HOH HOH . P 7 HOH B 32 432 139 HOH HOH . P 7 HOH B 33 433 147 HOH HOH . P 7 HOH B 34 434 155 HOH HOH . P 7 HOH B 35 435 173 HOH HOH . P 7 HOH B 36 436 174 HOH HOH . P 7 HOH B 37 437 178 HOH HOH . P 7 HOH B 38 438 182 HOH HOH . P 7 HOH B 39 439 183 HOH HOH . P 7 HOH B 40 440 184 HOH HOH . P 7 HOH B 41 441 185 HOH HOH . P 7 HOH B 42 442 186 HOH HOH . P 7 HOH B 43 443 190 HOH HOH . P 7 HOH B 44 444 200 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . J 6 73.03 -16.442 341.942 1 51.98 ? O1 PG4 301 B 1 HETATM 2 C C1 PG4 . . . J 6 74.039 -15.701 342.526 1 48.77 ? C1 PG4 301 B 1 HETATM 3 C C2 PG4 . . . J 6 73.965 -14.223 342.381 1 46.12 ? C2 PG4 301 B 1 HETATM 4 O O2 PG4 . . . J 6 75.098 -13.491 342.614 1 46.48 ? O2 PG4 301 B 1 HETATM 5 C C3 PG4 . . . J 6 75.205 -12.22 342.098 1 44.36 ? C3 PG4 301 B 1 HETATM 6 C C4 PG4 . . . J 6 74.171 -11.212 342.46 1 41.33 ? C4 PG4 301 B 1 HETATM 7 O O3 PG4 . . . J 6 73.351 -10.79 341.436 1 41.67 ? O3 PG4 301 B 1 HETATM 8 C C5 PG4 . . . J 6 72.492 -9.735 341.643 1 37.06 ? C5 PG4 301 B 1 HETATM 9 C C6 PG4 . . . J 6 71.066 -9.969 341.303 1 35.9 ? C6 PG4 301 B 1 HETATM 10 O O4 PG4 . . . J 6 70.798 -10.636 340.129 1 35.95 ? O4 PG4 301 B 1 HETATM 11 C C7 PG4 . . . J 6 69.83 -11.602 340.094 1 29.3 ? C7 PG4 301 B 1 HETATM 12 C C8 PG4 . . . J 6 70.244 -12.953 340.555 1 36.01 ? C8 PG4 301 B 1 HETATM 13 O O5 PG4 . . . J 6 71.546 -13.135 340.985 1 37.41 ? O5 PG4 301 B 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 13 #