data_4QF4 # _model_server_result.job_id t5EVPuR-qVW_NNQF73sVZg _model_server_result.datetime_utc '2024-11-26 01:10:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qf4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":202}' # _entry.id 4QF4 # _exptl.entry_id 4QF4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QF4 _cell.length_a 67.53 _cell.length_b 67.53 _cell.length_c 62.817 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QF4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1 B,F,G,H,J 2 1 A,C,D,E,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 21 A ASP 21 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc2 A OD1 ASP 40 A ASP 40 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc3 A O THR 41 A THR 41 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc4 C O4P THP . A THP 201 1_555 D CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? metalc ? metalc5 D CA CA . A CA 202 1_555 I O HOH . A HOH 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc6 D CA CA . A CA 202 1_555 I O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.655 ? metalc ? metalc7 D CA CA . A CA 202 1_555 I O HOH . A HOH 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc8 B OD1 ASP 21 B ASP 21 1_555 G CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc9 B OD1 ASP 40 B ASP 40 1_555 G CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? metalc ? metalc10 B O THR 41 B THR 41 1_555 G CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc11 F O4P THP . B THP 201 1_555 G CA CA . B CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.733 ? metalc ? metalc12 G CA CA . B CA 202 1_555 J O HOH . B HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.666 ? metalc ? metalc13 G CA CA . B CA 202 1_555 J O HOH . B HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc14 G CA CA . B CA 202 1_555 J O HOH . B HOH 325 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4QF4 _atom_sites.fract_transf_matrix[1][1] 0.014808 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014808 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015919 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 THP A 1 201 1 THP THP . D 3 CA A 1 202 1 CA CA . E 4 PO4 A 1 203 2 PO4 PO4 . F 2 THP B 1 201 1 THP THP . G 3 CA B 1 202 1 CA CA . H 4 PO4 B 1 203 1 PO4 PO4 . I 5 HOH A 1 301 1 HOH HOH . I 5 HOH A 2 302 2 HOH HOH . I 5 HOH A 3 303 4 HOH HOH . I 5 HOH A 4 304 7 HOH HOH . I 5 HOH A 5 305 12 HOH HOH . I 5 HOH A 6 306 13 HOH HOH . I 5 HOH A 7 307 15 HOH HOH . I 5 HOH A 8 308 17 HOH HOH . I 5 HOH A 9 309 18 HOH HOH . I 5 HOH A 10 310 19 HOH HOH . I 5 HOH A 11 311 20 HOH HOH . I 5 HOH A 12 312 25 HOH HOH . I 5 HOH A 13 313 27 HOH HOH . I 5 HOH A 14 314 30 HOH HOH . I 5 HOH A 15 315 31 HOH HOH . I 5 HOH A 16 316 36 HOH HOH . I 5 HOH A 17 317 37 HOH HOH . I 5 HOH A 18 318 41 HOH HOH . I 5 HOH A 19 319 44 HOH HOH . I 5 HOH A 20 320 46 HOH HOH . I 5 HOH A 21 321 47 HOH HOH . I 5 HOH A 22 322 48 HOH HOH . I 5 HOH A 23 323 49 HOH HOH . I 5 HOH A 24 324 50 HOH HOH . I 5 HOH A 25 325 51 HOH HOH . I 5 HOH A 26 326 52 HOH HOH . I 5 HOH A 27 327 59 HOH HOH . I 5 HOH A 28 328 60 HOH HOH . I 5 HOH A 29 329 61 HOH HOH . I 5 HOH A 30 330 62 HOH HOH . I 5 HOH A 31 331 63 HOH HOH . I 5 HOH A 32 332 64 HOH HOH . I 5 HOH A 33 333 66 HOH HOH . I 5 HOH A 34 334 67 HOH HOH . I 5 HOH A 35 335 68 HOH HOH . I 5 HOH A 36 336 69 HOH HOH . I 5 HOH A 37 337 70 HOH HOH . I 5 HOH A 38 338 81 HOH HOH . I 5 HOH A 39 339 82 HOH HOH . I 5 HOH A 40 340 83 HOH HOH . I 5 HOH A 41 341 84 HOH HOH . I 5 HOH A 42 342 85 HOH HOH . I 5 HOH A 43 343 86 HOH HOH . I 5 HOH A 44 344 93 HOH HOH . I 5 HOH A 45 345 95 HOH HOH . I 5 HOH A 46 346 96 HOH HOH . I 5 HOH A 47 347 105 HOH HOH . I 5 HOH A 48 348 106 HOH HOH . I 5 HOH A 49 349 108 HOH HOH . I 5 HOH A 50 350 109 HOH HOH . I 5 HOH A 51 351 110 HOH HOH . I 5 HOH A 52 352 113 HOH HOH . I 5 HOH A 53 353 114 HOH HOH . J 5 HOH B 1 301 3 HOH HOH . J 5 HOH B 2 302 5 HOH HOH . J 5 HOH B 3 303 6 HOH HOH . J 5 HOH B 4 304 8 HOH HOH . J 5 HOH B 5 305 9 HOH HOH . J 5 HOH B 6 306 10 HOH HOH . J 5 HOH B 7 307 11 HOH HOH . J 5 HOH B 8 308 14 HOH HOH . J 5 HOH B 9 309 16 HOH HOH . J 5 HOH B 10 310 21 HOH HOH . J 5 HOH B 11 311 22 HOH HOH . J 5 HOH B 12 312 23 HOH HOH . J 5 HOH B 13 313 24 HOH HOH . J 5 HOH B 14 314 28 HOH HOH . J 5 HOH B 15 315 29 HOH HOH . J 5 HOH B 16 316 32 HOH HOH . J 5 HOH B 17 317 33 HOH HOH . J 5 HOH B 18 318 34 HOH HOH . J 5 HOH B 19 319 35 HOH HOH . J 5 HOH B 20 320 38 HOH HOH . J 5 HOH B 21 321 39 HOH HOH . J 5 HOH B 22 322 40 HOH HOH . J 5 HOH B 23 323 42 HOH HOH . J 5 HOH B 24 324 43 HOH HOH . J 5 HOH B 25 325 45 HOH HOH . J 5 HOH B 26 326 53 HOH HOH . J 5 HOH B 27 327 54 HOH HOH . J 5 HOH B 28 328 55 HOH HOH . J 5 HOH B 29 329 56 HOH HOH . J 5 HOH B 30 330 57 HOH HOH . J 5 HOH B 31 331 58 HOH HOH . J 5 HOH B 32 332 71 HOH HOH . J 5 HOH B 33 333 72 HOH HOH . J 5 HOH B 34 334 73 HOH HOH . J 5 HOH B 35 335 74 HOH HOH . J 5 HOH B 36 336 75 HOH HOH . J 5 HOH B 37 337 76 HOH HOH . J 5 HOH B 38 338 77 HOH HOH . J 5 HOH B 39 339 78 HOH HOH . J 5 HOH B 40 340 79 HOH HOH . J 5 HOH B 41 341 80 HOH HOH . J 5 HOH B 42 342 87 HOH HOH . J 5 HOH B 43 343 88 HOH HOH . J 5 HOH B 44 344 89 HOH HOH . J 5 HOH B 45 345 90 HOH HOH . J 5 HOH B 46 346 91 HOH HOH . J 5 HOH B 47 347 92 HOH HOH . J 5 HOH B 48 348 94 HOH HOH . J 5 HOH B 49 349 97 HOH HOH . J 5 HOH B 50 350 98 HOH HOH . J 5 HOH B 51 351 99 HOH HOH . J 5 HOH B 52 352 100 HOH HOH . J 5 HOH B 53 353 101 HOH HOH . J 5 HOH B 54 354 102 HOH HOH . J 5 HOH B 55 355 103 HOH HOH . J 5 HOH B 56 356 104 HOH HOH . J 5 HOH B 57 357 107 HOH HOH . J 5 HOH B 58 358 111 HOH HOH . J 5 HOH B 59 359 112 HOH HOH . J 5 HOH B 60 360 115 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 5.754 _atom_site.Cartn_y 20.414 _atom_site.Cartn_z 14.684 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 37.87 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 202 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #