data_4QFS # _model_server_result.job_id 53hAvovU24jS3JtWWi6dQQ _model_server_result.datetime_utc '2025-01-10 10:21:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qfs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 4QFS # _exptl.entry_id 4QFS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.531 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description STAUROSPORINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4QFS _cell.length_a 123.88 _cell.length_b 123.88 _cell.length_c 401.64 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QFS _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA hexameric 6 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1 A,B,C,D,E,F,G,H,I,J,K,L,M 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_444 -y-1,-x-1,-z-1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 -61.94 -107.283227 -66.94 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 173 A ARG 171 1_555 A N TPO 174 A TPO 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.356 ? covale ? covale2 A C TPO 174 A TPO 172 1_555 A N SER 175 A SER 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'C28 H26 N4 O3' _chem_comp.formula_weight 466.531 _chem_comp.id STU _chem_comp.mon_nstd_flag . _chem_comp.name STAUROSPORINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C25 STU sing 360 n n O4 C21 STU sing 361 n n C25 C24 STU sing 362 n n C25 N3 STU sing 363 n n C25 H25 STU sing 364 n n C24 C23 STU sing 365 n n C24 H241 STU sing 366 n n C24 H242 STU sing 367 n n C23 C22 STU sing 368 n n C23 N4 STU sing 369 n n C23 H23 STU sing 370 n n C22 C21 STU sing 371 n n C22 O6 STU sing 372 n n C22 H22 STU sing 373 n n C21 C26 STU sing 374 n n C21 N2 STU sing 375 n n C26 H261 STU sing 376 n n C26 H262 STU sing 377 n n C26 H263 STU sing 378 n n N2 C18 STU sing 379 n y N2 C17 STU sing 380 n y C18 C19 STU doub 381 n y C18 C11 STU sing 382 n y C19 C6 STU sing 383 n y C19 N3 STU sing 384 n y C6 C7 STU doub 385 n y C6 C5 STU sing 386 n y C7 C10 STU sing 387 n y C7 C8 STU sing 388 n n C10 C11 STU doub 389 n y C10 C9 STU sing 390 n n C11 C12 STU sing 391 n y C12 C17 STU doub 392 n y C12 C13 STU sing 393 n y C17 C16 STU sing 394 n y C16 C15 STU doub 395 n y C16 H16 STU sing 396 n n C15 C14 STU sing 397 n y C15 H15 STU sing 398 n n C14 C13 STU doub 399 n y C14 H14 STU sing 400 n n C13 H13 STU sing 401 n n C9 N1 STU sing 402 n n C9 H91 STU sing 403 n n C9 H92 STU sing 404 n n N1 C8 STU sing 405 n n N1 HN1 STU sing 406 n n C8 O5 STU doub 407 n n C5 C20 STU doub 408 n y C5 C4 STU sing 409 n y C20 C1 STU sing 410 n y C20 N3 STU sing 411 n y C1 C2 STU doub 412 n y C1 H1 STU sing 413 n n C2 C3 STU sing 414 n y C2 H2 STU sing 415 n n C3 C4 STU doub 416 n y C3 H3 STU sing 417 n n C4 H4 STU sing 418 n n O6 C27 STU sing 419 n n C27 H271 STU sing 420 n n C27 H272 STU sing 421 n n C27 H273 STU sing 422 n n N4 C28 STU sing 423 n n N4 HN4 STU sing 424 n n C28 H281 STU sing 425 n n C28 H282 STU sing 426 n n C28 H283 STU sing 427 n n # _atom_sites.entry_id 4QFS _atom_sites.fract_transf_matrix[1][1] 0.008072 _atom_sites.fract_transf_matrix[1][2] 0.004661 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009321 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00249 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 STU A 1 601 1549 STU STU . E 5 32H A 1 602 4000 32H PFE . F 6 CL A 1 603 6 CL CL . G 6 CL A 1 604 7 CL CL . H 6 CL A 1 605 9 CL CL . I 6 CL A 1 606 10 CL CL . J 6 CL B 1 301 8 CL CL . K 7 AMP C 1 401 1 AMP AMP . L 8 SO4 C 1 402 4 SO4 SO4 . M 8 SO4 C 1 403 5 SO4 SO4 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 STU . . . D 4 41.718 -86 -26.558 1 53.1 ? O4 STU 601 A 1 HETATM 2 C C25 STU . . . D 4 42.273 -87.036 -25.737 1 53.1 ? C25 STU 601 A 1 HETATM 3 C C24 STU . . . D 4 41.309 -87.602 -24.695 1 56.27 ? C24 STU 601 A 1 HETATM 4 C C23 STU . . . D 4 39.882 -87.147 -24.941 1 58.04 ? C23 STU 601 A 1 HETATM 5 C C22 STU . . . D 4 39.863 -85.629 -24.933 1 58.3 ? C22 STU 601 A 1 HETATM 6 C C21 STU . . . D 4 40.815 -85.047 -25.985 1 56.58 ? C21 STU 601 A 1 HETATM 7 C C26 STU . . . D 4 40.007 -84.547 -27.177 1 58.72 ? C26 STU 601 A 1 HETATM 8 N N2 STU . . . D 4 41.577 -83.901 -25.397 1 58.02 ? N2 STU 601 A 1 HETATM 9 C C18 STU . . . D 4 42.812 -84.026 -24.847 1 58.21 ? C18 STU 601 A 1 HETATM 10 C C19 STU . . . D 4 43.698 -85.219 -24.694 1 59.16 ? C19 STU 601 A 1 HETATM 11 C C6 STU . . . D 4 45.007 -85.066 -24.057 1 60.1 ? C6 STU 601 A 1 HETATM 12 C C7 STU . . . D 4 45.399 -83.711 -23.589 1 59.93 ? C7 STU 601 A 1 HETATM 13 C C10 STU . . . D 4 44.565 -82.514 -23.719 1 58.64 ? C10 STU 601 A 1 HETATM 14 C C11 STU . . . D 4 43.233 -82.695 -24.371 1 57.04 ? C11 STU 601 A 1 HETATM 15 C C12 STU . . . D 4 42.118 -81.806 -24.696 1 57.63 ? C12 STU 601 A 1 HETATM 16 C C17 STU . . . D 4 41.069 -82.626 -25.353 1 57.47 ? C17 STU 601 A 1 HETATM 17 C C16 STU . . . D 4 39.91 -81.965 -25.748 1 59.12 ? C16 STU 601 A 1 HETATM 18 C C15 STU . . . D 4 39.786 -80.593 -25.513 1 61.9 ? C15 STU 601 A 1 HETATM 19 C C14 STU . . . D 4 40.793 -79.848 -24.891 1 63.72 ? C14 STU 601 A 1 HETATM 20 C C13 STU . . . D 4 41.977 -80.449 -24.473 1 61.17 ? C13 STU 601 A 1 HETATM 21 C C9 STU . . . D 4 45.24 -81.351 -23.161 1 62.07 ? C9 STU 601 A 1 HETATM 22 N N1 STU . . . D 4 46.535 -81.902 -22.681 1 64.49 ? N1 STU 601 A 1 HETATM 23 C C8 STU . . . D 4 46.625 -83.231 -22.922 1 62.44 ? C8 STU 601 A 1 HETATM 24 O O5 STU . . . D 4 47.632 -83.968 -22.614 1 62.47 ? O5 STU 601 A 1 HETATM 25 C C5 STU . . . D 4 45.584 -86.399 -24.075 1 58.87 ? C5 STU 601 A 1 HETATM 26 C C20 STU . . . D 4 44.576 -87.272 -24.725 1 55.13 ? C20 STU 601 A 1 HETATM 27 C C1 STU . . . D 4 44.907 -88.613 -24.857 1 53.01 ? C1 STU 601 A 1 HETATM 28 C C2 STU . . . D 4 46.14 -89.072 -24.386 1 55.1 ? C2 STU 601 A 1 HETATM 29 C C3 STU . . . D 4 47.07 -88.221 -23.777 1 56.65 ? C3 STU 601 A 1 HETATM 30 C C4 STU . . . D 4 46.8 -86.865 -23.613 1 58.33 ? C4 STU 601 A 1 HETATM 31 N N3 STU . . . D 4 43.483 -86.508 -25.063 1 55.39 ? N3 STU 601 A 1 HETATM 32 O O6 STU . . . D 4 40.23 -85.191 -23.619 1 62.77 ? O6 STU 601 A 1 HETATM 33 C C27 STU . . . D 4 39.215 -84.456 -22.933 1 63.1 ? C27 STU 601 A 1 HETATM 34 N N4 STU . . . D 4 38.99 -87.678 -23.929 1 61.89 ? N4 STU 601 A 1 HETATM 35 C C28 STU . . . D 4 37.562 -87.763 -24.162 1 66.6 ? C28 STU 601 A 1 HETATM 36 H H25 STU . . . D 4 42.574 -87.869 -26.388 1 52.96 ? H25 STU 601 A 1 HETATM 37 H H241 STU . . . D 4 41.624 -87.28 -23.7 1 56.3 ? H241 STU 601 A 1 HETATM 38 H H242 STU . . . D 4 41.349 -88.693 -24.72 1 57.12 ? H242 STU 601 A 1 HETATM 39 H H23 STU . . . D 4 39.559 -87.503 -25.929 1 58.41 ? H23 STU 601 A 1 HETATM 40 H H22 STU . . . D 4 38.839 -85.31 -25.18 1 57.66 ? H22 STU 601 A 1 HETATM 41 H H261 STU . . . D 4 40.536 -83.768 -27.661 1 59.25 ? H261 STU 601 A 1 HETATM 42 H H262 STU . . . D 4 39.071 -84.182 -26.84 1 58.75 ? H262 STU 601 A 1 HETATM 43 H H263 STU . . . D 4 39.851 -85.344 -27.857 1 59.24 ? H263 STU 601 A 1 HETATM 44 H H16 STU . . . D 4 39.101 -82.495 -26.232 1 59.29 ? H16 STU 601 A 1 HETATM 45 H H15 STU . . . D 4 38.879 -80.089 -25.824 1 62.86 ? H15 STU 601 A 1 HETATM 46 H H14 STU . . . D 4 40.65 -78.786 -24.731 1 65.34 ? H14 STU 601 A 1 HETATM 47 H H13 STU . . . D 4 42.759 -79.875 -23.991 1 61.64 ? H13 STU 601 A 1 HETATM 48 H H91 STU . . . D 4 45.399 -80.587 -23.925 1 62.69 ? H91 STU 601 A 1 HETATM 49 H H92 STU . . . D 4 44.667 -80.925 -22.334 1 61.85 ? H92 STU 601 A 1 HETATM 50 H HN1 STU . . . D 4 47.175 -81.211 -22.239 1 65.19 ? HN1 STU 601 A 1 HETATM 51 H H1 STU . . . D 4 44.212 -89.301 -25.323 1 52.67 ? H1 STU 601 A 1 HETATM 52 H H2 STU . . . D 4 46.385 -90.122 -24.496 1 56.13 ? H2 STU 601 A 1 HETATM 53 H H3 STU . . . D 4 48.013 -88.623 -23.428 1 57.5 ? H3 STU 601 A 1 HETATM 54 H H4 STU . . . D 4 47.515 -86.201 -23.143 1 59.14 ? H4 STU 601 A 1 HETATM 55 H H271 STU . . . D 4 39.47 -84.373 -21.909 1 62.67 ? H271 STU 601 A 1 HETATM 56 H H272 STU . . . D 4 38.289 -84.961 -23.027 1 62.94 ? H272 STU 601 A 1 HETATM 57 H H273 STU . . . D 4 39.133 -83.488 -23.356 1 63.56 ? H273 STU 601 A 1 HETATM 58 H HN4 STU . . . D 4 39.37 -87.994 -23.048 1 61.74 ? HN4 STU 601 A 1 HETATM 59 H H281 STU . . . D 4 37.271 -88.78 -24.204 1 66.78 ? H281 STU 601 A 1 HETATM 60 H H282 STU . . . D 4 37.046 -87.281 -23.373 1 67.11 ? H282 STU 601 A 1 HETATM 61 H H283 STU . . . D 4 37.325 -87.29 -25.08 1 67.55 ? H283 STU 601 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 61 #