data_4QG1 # _model_server_result.job_id grCY69gyvzO_t8Gy3mtJ0A _model_server_result.datetime_utc '2024-11-28 21:58:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qg1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":705}' # _entry.id 4QG1 # _exptl.entry_id 4QG1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.76 _cell.angle_gamma 90 _cell.entry_id 4QG1 _cell.length_a 87.695 _cell.length_b 146.724 _cell.length_c 99.256 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QG1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 O N N ? 3 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 265 A CYS 341 1_555 A SG CYS 274 A CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 C SG CYS 265 C CYS 341 1_555 C SG CYS 274 C CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? disulf ? disulf3 D SG CYS 265 D CYS 341 1_555 D SG CYS 274 D CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc1 F O1B DTP . A DTP 702 1_555 H MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? metalc ? metalc2 F O2G DTP . A DTP 702 1_555 H MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc3 G MG MG . A MG 703 1_555 K O1B DTP . B DTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc4 G MG MG . A MG 703 1_555 K O2G DTP . B DTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc5 G MG MG . A MG 703 1_555 R O3G GTP . D GTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc6 G MG MG . A MG 703 1_555 R O1B GTP . D GTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc7 G MG MG . A MG 703 1_555 R O2A GTP . D GTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc8 H MG MG . A MG 704 1_555 M O3G GTP . C GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc9 H MG MG . A MG 704 1_555 M O1B GTP . C GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.943 ? metalc ? metalc10 H MG MG . A MG 704 1_555 M O2A GTP . C GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc11 I O3G GTP . B GTP 701 1_555 O MG MG . C MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc12 I O2A GTP . B GTP 701 1_555 O MG MG . C MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc13 I O1B GTP . B GTP 701 1_555 O MG MG . C MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? metalc ? metalc14 L O1B DTP . C DTP 701 1_555 T MG MG . D MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc15 L O2G DTP . C DTP 701 1_555 T MG MG . D MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? metalc ? metalc16 O MG MG . C MG 704 1_555 Q O1B DTP . D DTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.983 ? metalc ? metalc17 O MG MG . C MG 704 1_555 Q O2G DTP . D DTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? metalc ? metalc18 P O3G GTP . D GTP 701 1_555 T MG MG . D MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc19 P O2A GTP . D GTP 701 1_555 T MG MG . D MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc20 P O1B GTP . D GTP 701 1_555 T MG MG . D MG 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4QG1 _atom_sites.fract_transf_matrix[1][1] 0.011403 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005259 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006816 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011095 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 DTP A 1 701 700 DTP DTP . F 2 DTP A 1 702 800 DTP DTP . G 3 MG A 1 703 1 MG MG . H 3 MG A 1 704 2 MG MG . I 4 GTP B 1 701 900 GTP GTP . J 2 DTP B 1 702 700 DTP DTP . K 2 DTP B 1 703 800 DTP DTP . L 2 DTP C 1 701 800 DTP DTP . M 4 GTP C 1 702 900 GTP GTP . N 2 DTP C 1 703 700 DTP DTP . O 3 MG C 1 704 3 MG MG . P 4 GTP D 1 701 900 GTP GTP . Q 2 DTP D 1 702 800 DTP DTP . R 4 GTP D 1 703 900 GTP GTP . S 2 DTP D 1 704 700 DTP DTP . T 3 MG D 1 705 4 MG MG . U 5 HOH A 1 801 3 HOH HOH . U 5 HOH A 2 802 11 HOH HOH . U 5 HOH A 3 803 13 HOH HOH . U 5 HOH A 4 804 30 HOH HOH . U 5 HOH A 5 805 33 HOH HOH . U 5 HOH A 6 806 34 HOH HOH . U 5 HOH A 7 807 39 HOH HOH . U 5 HOH A 8 808 42 HOH HOH . U 5 HOH A 9 809 43 HOH HOH . U 5 HOH A 10 810 57 HOH HOH . U 5 HOH A 11 811 60 HOH HOH . U 5 HOH A 12 812 63 HOH HOH . U 5 HOH A 13 813 65 HOH HOH . U 5 HOH A 14 814 67 HOH HOH . U 5 HOH A 15 815 71 HOH HOH . U 5 HOH A 16 816 72 HOH HOH . U 5 HOH A 17 817 73 HOH HOH . U 5 HOH A 18 818 80 HOH HOH . U 5 HOH A 19 819 86 HOH HOH . U 5 HOH A 20 820 87 HOH HOH . U 5 HOH A 21 821 104 HOH HOH . U 5 HOH A 22 822 107 HOH HOH . U 5 HOH A 23 823 121 HOH HOH . U 5 HOH A 24 824 133 HOH HOH . U 5 HOH A 25 825 136 HOH HOH . U 5 HOH A 26 826 153 HOH HOH . U 5 HOH A 27 827 155 HOH HOH . U 5 HOH A 28 828 162 HOH HOH . U 5 HOH A 29 829 163 HOH HOH . U 5 HOH A 30 830 166 HOH HOH . U 5 HOH A 31 831 168 HOH HOH . U 5 HOH A 32 832 172 HOH HOH . U 5 HOH A 33 833 178 HOH HOH . U 5 HOH A 34 834 188 HOH HOH . U 5 HOH A 35 835 194 HOH HOH . U 5 HOH A 36 836 204 HOH HOH . U 5 HOH A 37 837 205 HOH HOH . V 5 HOH B 1 801 6 HOH HOH . V 5 HOH B 2 802 7 HOH HOH . V 5 HOH B 3 803 8 HOH HOH . V 5 HOH B 4 804 14 HOH HOH . V 5 HOH B 5 805 15 HOH HOH . V 5 HOH B 6 806 16 HOH HOH . V 5 HOH B 7 807 19 HOH HOH . V 5 HOH B 8 808 23 HOH HOH . V 5 HOH B 9 809 24 HOH HOH . V 5 HOH B 10 810 25 HOH HOH . V 5 HOH B 11 811 35 HOH HOH . V 5 HOH B 12 812 38 HOH HOH . V 5 HOH B 13 813 46 HOH HOH . V 5 HOH B 14 814 52 HOH HOH . V 5 HOH B 15 815 53 HOH HOH . V 5 HOH B 16 816 54 HOH HOH . V 5 HOH B 17 817 58 HOH HOH . V 5 HOH B 18 818 68 HOH HOH . V 5 HOH B 19 819 69 HOH HOH . V 5 HOH B 20 820 74 HOH HOH . V 5 HOH B 21 821 77 HOH HOH . V 5 HOH B 22 822 90 HOH HOH . V 5 HOH B 23 823 93 HOH HOH . V 5 HOH B 24 824 106 HOH HOH . V 5 HOH B 25 825 112 HOH HOH . V 5 HOH B 26 826 114 HOH HOH . V 5 HOH B 27 827 117 HOH HOH . V 5 HOH B 28 828 118 HOH HOH . V 5 HOH B 29 829 120 HOH HOH . V 5 HOH B 30 830 122 HOH HOH . V 5 HOH B 31 831 125 HOH HOH . V 5 HOH B 32 832 129 HOH HOH . V 5 HOH B 33 833 131 HOH HOH . V 5 HOH B 34 834 135 HOH HOH . V 5 HOH B 35 835 137 HOH HOH . V 5 HOH B 36 836 146 HOH HOH . V 5 HOH B 37 837 150 HOH HOH . V 5 HOH B 38 838 158 HOH HOH . V 5 HOH B 39 839 161 HOH HOH . V 5 HOH B 40 840 167 HOH HOH . V 5 HOH B 41 841 169 HOH HOH . V 5 HOH B 42 842 180 HOH HOH . V 5 HOH B 43 843 181 HOH HOH . V 5 HOH B 44 844 182 HOH HOH . V 5 HOH B 45 845 186 HOH HOH . V 5 HOH B 46 846 191 HOH HOH . V 5 HOH B 47 847 193 HOH HOH . V 5 HOH B 48 848 196 HOH HOH . V 5 HOH B 49 849 198 HOH HOH . V 5 HOH B 50 850 201 HOH HOH . V 5 HOH B 51 851 202 HOH HOH . V 5 HOH B 52 852 206 HOH HOH . V 5 HOH B 53 853 208 HOH HOH . V 5 HOH B 54 854 210 HOH HOH . V 5 HOH B 55 855 214 HOH HOH . V 5 HOH B 56 856 217 HOH HOH . W 5 HOH C 1 801 9 HOH HOH . W 5 HOH C 2 802 22 HOH HOH . W 5 HOH C 3 803 31 HOH HOH . W 5 HOH C 4 804 37 HOH HOH . W 5 HOH C 5 805 50 HOH HOH . W 5 HOH C 6 806 51 HOH HOH . W 5 HOH C 7 807 55 HOH HOH . W 5 HOH C 8 808 62 HOH HOH . W 5 HOH C 9 809 66 HOH HOH . W 5 HOH C 10 810 70 HOH HOH . W 5 HOH C 11 811 79 HOH HOH . W 5 HOH C 12 812 83 HOH HOH . W 5 HOH C 13 813 85 HOH HOH . W 5 HOH C 14 814 91 HOH HOH . W 5 HOH C 15 815 94 HOH HOH . W 5 HOH C 16 816 95 HOH HOH . W 5 HOH C 17 817 96 HOH HOH . W 5 HOH C 18 818 100 HOH HOH . W 5 HOH C 19 819 101 HOH HOH . W 5 HOH C 20 820 105 HOH HOH . W 5 HOH C 21 821 108 HOH HOH . W 5 HOH C 22 822 119 HOH HOH . W 5 HOH C 23 823 124 HOH HOH . W 5 HOH C 24 824 128 HOH HOH . W 5 HOH C 25 825 132 HOH HOH . W 5 HOH C 26 826 134 HOH HOH . W 5 HOH C 27 827 139 HOH HOH . W 5 HOH C 28 828 140 HOH HOH . W 5 HOH C 29 829 145 HOH HOH . W 5 HOH C 30 830 149 HOH HOH . W 5 HOH C 31 831 152 HOH HOH . W 5 HOH C 32 832 156 HOH HOH . W 5 HOH C 33 833 157 HOH HOH . W 5 HOH C 34 834 165 HOH HOH . W 5 HOH C 35 835 173 HOH HOH . W 5 HOH C 36 836 187 HOH HOH . W 5 HOH C 37 837 192 HOH HOH . W 5 HOH C 38 838 213 HOH HOH . X 5 HOH D 1 801 1 HOH HOH . X 5 HOH D 2 802 2 HOH HOH . X 5 HOH D 3 803 4 HOH HOH . X 5 HOH D 4 804 5 HOH HOH . X 5 HOH D 5 805 10 HOH HOH . X 5 HOH D 6 806 12 HOH HOH . X 5 HOH D 7 807 17 HOH HOH . X 5 HOH D 8 808 18 HOH HOH . X 5 HOH D 9 809 20 HOH HOH . X 5 HOH D 10 810 26 HOH HOH . X 5 HOH D 11 811 27 HOH HOH . X 5 HOH D 12 812 28 HOH HOH . X 5 HOH D 13 813 29 HOH HOH . X 5 HOH D 14 814 32 HOH HOH . X 5 HOH D 15 815 36 HOH HOH . X 5 HOH D 16 816 41 HOH HOH . X 5 HOH D 17 817 45 HOH HOH . X 5 HOH D 18 818 47 HOH HOH . X 5 HOH D 19 819 56 HOH HOH . X 5 HOH D 20 820 59 HOH HOH . X 5 HOH D 21 821 61 HOH HOH . X 5 HOH D 22 822 75 HOH HOH . X 5 HOH D 23 823 76 HOH HOH . X 5 HOH D 24 824 78 HOH HOH . X 5 HOH D 25 825 82 HOH HOH . X 5 HOH D 26 826 84 HOH HOH . X 5 HOH D 27 827 88 HOH HOH . X 5 HOH D 28 828 89 HOH HOH . X 5 HOH D 29 829 97 HOH HOH . X 5 HOH D 30 830 102 HOH HOH . X 5 HOH D 31 831 103 HOH HOH . X 5 HOH D 32 832 109 HOH HOH . X 5 HOH D 33 833 110 HOH HOH . X 5 HOH D 34 834 115 HOH HOH . X 5 HOH D 35 835 116 HOH HOH . X 5 HOH D 36 836 123 HOH HOH . X 5 HOH D 37 837 127 HOH HOH . X 5 HOH D 38 838 130 HOH HOH . X 5 HOH D 39 839 138 HOH HOH . X 5 HOH D 40 840 141 HOH HOH . X 5 HOH D 41 841 142 HOH HOH . X 5 HOH D 42 842 144 HOH HOH . X 5 HOH D 43 843 147 HOH HOH . X 5 HOH D 44 844 151 HOH HOH . X 5 HOH D 45 845 154 HOH HOH . X 5 HOH D 46 846 159 HOH HOH . X 5 HOH D 47 847 160 HOH HOH . X 5 HOH D 48 848 170 HOH HOH . X 5 HOH D 49 849 174 HOH HOH . X 5 HOH D 50 850 175 HOH HOH . X 5 HOH D 51 851 177 HOH HOH . X 5 HOH D 52 852 179 HOH HOH . X 5 HOH D 53 853 183 HOH HOH . X 5 HOH D 54 854 189 HOH HOH . X 5 HOH D 55 855 195 HOH HOH . X 5 HOH D 56 856 197 HOH HOH . X 5 HOH D 57 857 200 HOH HOH . X 5 HOH D 58 858 203 HOH HOH . X 5 HOH D 59 859 215 HOH HOH . X 5 HOH D 60 860 216 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 3 _atom_site.Cartn_x -16.503 _atom_site.Cartn_y -20.023 _atom_site.Cartn_z 48.498 _atom_site.occupancy 0.9 _atom_site.B_iso_or_equiv 60.09 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 705 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 102 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 67 _model_server_stats.query_time_ms 838 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #