data_4QG2
#
_model_server_result.job_id            NTjJhI0bYpVkWYfbjSY_ug 
_model_server_result.datetime_utc      '2024-11-28 12:32:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4qg2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":702}' 
#
_entry.id    4QG2 
#
_exptl.entry_id    4QG2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              523.18 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          114.6 
_cell.angle_gamma         90 
_cell.entry_id            4QG2 
_cell.length_a            87.23 
_cell.length_b            147.005 
_cell.length_c            99.292 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QG2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 I N N 
? 2 J N N 
? 2 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 265 A CYS 341 1_555 A SG CYS 274 A CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
disulf ? disulf2 C SG CYS 265 C CYS 341 1_555 C SG CYS 274 C CYS 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc1 E O1G GTP . A GTP 701 1_555 P MG MG . D MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
metalc ? metalc2 E O1A GTP . A GTP 701 1_555 P MG MG . D MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? 
metalc ? metalc3 E O1B GTP . A GTP 701 1_555 P MG MG . D MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc4 F O1B DTP . A DTP 702 1_555 H MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.861 ? 
metalc ? metalc5 F O1G DTP . A DTP 702 1_555 H MG MG . A MG 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? 
metalc ? metalc6 G MG MG . A MG 703 1_555 K O2G DTP . B DTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? 
metalc ? metalc7 G MG MG . A MG 703 1_555 K O3B DTP . B DTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc8 G MG MG . A MG 703 1_555 K O2B DTP . B DTP 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.926 ? 
metalc ? metalc9 G MG MG . A MG 703 1_555 O O1B GTP . D GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
metalc ? metalc10 G MG MG . A MG 703 1_555 O O1G GTP . D GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? 
metalc ? metalc11 G MG MG . A MG 703 1_555 O O1A GTP . D GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? 
metalc ? metalc12 H MG MG . A MG 704 1_555 Q O HOH . A HOH 813 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? 
metalc ? metalc13 H MG MG . A MG 704 1_555 J O3G GTP . B GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.862 ? 
metalc ? metalc14 H MG MG . A MG 704 1_555 J O2B GTP . B GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? 
metalc ? metalc15 H MG MG . A MG 704 1_555 J O2A GTP . B GTP 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? 
metalc ? metalc16 I O2A GTP . B GTP 701 1_555 M MG MG . C MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.224 ? 
metalc ? metalc17 I O3G GTP . B GTP 701 1_555 M MG MG . C MG 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc18 L O2B DTP . C DTP 701 1_555 P MG MG . D MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? 
metalc ? metalc19 L O2G DTP . C DTP 701 1_555 P MG MG . D MG 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc20 M MG MG . C MG 702 1_555 N O2B DTP . D DTP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? 
metalc ? metalc21 M MG MG . C MG 702 1_555 N O1G DTP . D DTP 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.591 ? 
#
_chem_comp.formula           'C10 H16 N5 O14 P3' 
_chem_comp.formula_weight    523.18 
_chem_comp.id                GTP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              "GUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GTP doub 177 n n 
PG O2G GTP sing 178 n n 
PG O3G GTP sing 179 n n 
PG O3B GTP sing 180 n n 
O2G HOG2 GTP sing 181 n n 
O3G HOG3 GTP sing 182 n n 
O3B PB GTP sing 183 n n 
PB O1B GTP doub 184 n n 
PB O2B GTP sing 185 n n 
PB O3A GTP sing 186 n n 
O2B HOB2 GTP sing 187 n n 
O3A PA GTP sing 188 n n 
PA O1A GTP doub 189 n n 
PA O2A GTP sing 190 n n 
PA O5' GTP sing 191 n n 
O2A HOA2 GTP sing 192 n n 
O5' C5' GTP sing 193 n n 
C5' C4' GTP sing 194 n n 
C5' H5' GTP sing 195 n n 
C5' "H5''" GTP sing 196 n n 
C4' O4' GTP sing 197 n n 
C4' C3' GTP sing 198 n n 
C4' H4' GTP sing 199 n n 
O4' C1' GTP sing 200 n n 
C3' O3' GTP sing 201 n n 
C3' C2' GTP sing 202 n n 
C3' H3' GTP sing 203 n n 
O3' HO3' GTP sing 204 n n 
C2' O2' GTP sing 205 n n 
C2' C1' GTP sing 206 n n 
C2' H2' GTP sing 207 n n 
O2' HO2' GTP sing 208 n n 
C1' N9 GTP sing 209 n n 
C1' H1' GTP sing 210 n n 
N9 C8 GTP sing 211 n y 
N9 C4 GTP sing 212 n y 
C8 N7 GTP doub 213 n y 
C8 H8 GTP sing 214 n n 
N7 C5 GTP sing 215 n y 
C5 C6 GTP sing 216 n n 
C5 C4 GTP doub 217 n y 
C6 O6 GTP doub 218 n n 
C6 N1 GTP sing 219 n n 
N1 C2 GTP sing 220 n n 
N1 HN1 GTP sing 221 n n 
C2 N2 GTP sing 222 n n 
C2 N3 GTP doub 223 n n 
N2 HN21 GTP sing 224 n n 
N2 HN22 GTP sing 225 n n 
N3 C4 GTP sing 226 n n 
#
_atom_sites.entry_id                     4QG2 
_atom_sites.fract_transf_matrix[1][1]    0.011464 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005249 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006802 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011077 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GTP A 1 701 900 GTP GTP . 
F 3 DTP A 1 702 800 DTP DAT . 
G 4 MG A 1 703 1 MG MG . 
H 4 MG A 1 704 1 MG MG . 
I 2 GTP B 1 701 900 GTP GTP . 
J 2 GTP B 1 702 900 GTP GTP . 
K 3 DTP B 1 703 800 DTP DAT . 
L 3 DTP C 1 701 800 DTP DAT . 
M 4 MG C 1 702 1 MG MG . 
N 3 DTP D 1 701 800 DTP DAT . 
O 2 GTP D 1 702 900 GTP GTP . 
P 4 MG D 1 703 1 MG MG . 
Q 5 HOH A 1 801 4 HOH HOH . 
Q 5 HOH A 2 802 6 HOH HOH . 
Q 5 HOH A 3 803 16 HOH HOH . 
Q 5 HOH A 4 804 21 HOH HOH . 
Q 5 HOH A 5 805 25 HOH HOH . 
Q 5 HOH A 6 806 32 HOH HOH . 
Q 5 HOH A 7 807 33 HOH HOH . 
Q 5 HOH A 8 808 38 HOH HOH . 
Q 5 HOH A 9 809 44 HOH HOH . 
Q 5 HOH A 10 810 47 HOH HOH . 
Q 5 HOH A 11 811 49 HOH HOH . 
Q 5 HOH A 12 812 54 HOH HOH . 
Q 5 HOH A 13 813 55 HOH HOH . 
Q 5 HOH A 14 814 56 HOH HOH . 
Q 5 HOH A 15 815 62 HOH HOH . 
Q 5 HOH A 16 816 64 HOH HOH . 
Q 5 HOH A 17 817 69 HOH HOH . 
Q 5 HOH A 18 818 76 HOH HOH . 
R 5 HOH B 1 801 9 HOH HOH . 
R 5 HOH B 2 802 11 HOH HOH . 
R 5 HOH B 3 803 12 HOH HOH . 
R 5 HOH B 4 804 15 HOH HOH . 
R 5 HOH B 5 805 22 HOH HOH . 
R 5 HOH B 6 806 26 HOH HOH . 
R 5 HOH B 7 807 36 HOH HOH . 
R 5 HOH B 8 808 41 HOH HOH . 
R 5 HOH B 9 809 45 HOH HOH . 
R 5 HOH B 10 810 48 HOH HOH . 
R 5 HOH B 11 811 52 HOH HOH . 
R 5 HOH B 12 812 59 HOH HOH . 
R 5 HOH B 13 813 65 HOH HOH . 
R 5 HOH B 14 814 67 HOH HOH . 
R 5 HOH B 15 815 70 HOH HOH . 
R 5 HOH B 16 816 72 HOH HOH . 
S 5 HOH C 1 801 8 HOH HOH . 
S 5 HOH C 2 802 18 HOH HOH . 
S 5 HOH C 3 803 20 HOH HOH . 
S 5 HOH C 4 804 23 HOH HOH . 
S 5 HOH C 5 805 24 HOH HOH . 
S 5 HOH C 6 806 30 HOH HOH . 
S 5 HOH C 7 807 31 HOH HOH . 
S 5 HOH C 8 808 34 HOH HOH . 
S 5 HOH C 9 809 35 HOH HOH . 
S 5 HOH C 10 810 37 HOH HOH . 
S 5 HOH C 11 811 39 HOH HOH . 
S 5 HOH C 12 812 46 HOH HOH . 
S 5 HOH C 13 813 60 HOH HOH . 
S 5 HOH C 14 814 68 HOH HOH . 
S 5 HOH C 15 815 73 HOH HOH . 
S 5 HOH C 16 816 75 HOH HOH . 
T 5 HOH D 1 801 1 HOH HOH . 
T 5 HOH D 2 802 2 HOH HOH . 
T 5 HOH D 3 803 3 HOH HOH . 
T 5 HOH D 4 804 5 HOH HOH . 
T 5 HOH D 5 805 7 HOH HOH . 
T 5 HOH D 6 806 10 HOH HOH . 
T 5 HOH D 7 807 13 HOH HOH . 
T 5 HOH D 8 808 14 HOH HOH . 
T 5 HOH D 9 809 17 HOH HOH . 
T 5 HOH D 10 810 19 HOH HOH . 
T 5 HOH D 11 811 27 HOH HOH . 
T 5 HOH D 12 812 28 HOH HOH . 
T 5 HOH D 13 813 29 HOH HOH . 
T 5 HOH D 14 814 40 HOH HOH . 
T 5 HOH D 15 815 43 HOH HOH . 
T 5 HOH D 16 816 50 HOH HOH . 
T 5 HOH D 17 817 51 HOH HOH . 
T 5 HOH D 18 818 53 HOH HOH . 
T 5 HOH D 19 819 57 HOH HOH . 
T 5 HOH D 20 820 58 HOH HOH . 
T 5 HOH D 21 821 61 HOH HOH . 
T 5 HOH D 22 822 63 HOH HOH . 
T 5 HOH D 23 823 66 HOH HOH . 
T 5 HOH D 24 824 71 HOH HOH . 
T 5 HOH D 25 825 74 HOH HOH . 
T 5 HOH D 26 826 77 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GTP . . . J 2 -15.593 8.699 3.997 0.96 62.64 ? PG GTP 702 B 1 
HETATM 2 O O1G GTP . . . J 2 -14.603 9.453 3.244 0.96 60.5 ? O1G GTP 702 B 1 
HETATM 3 O O2G GTP . . . J 2 -16.883 9.396 3.931 0.96 62.93 ? O2G GTP 702 B 1 
HETATM 4 O O3G GTP . . . J 2 -15.138 8.646 5.469 0.96 68.25 ? O3G GTP 702 B 1 
HETATM 5 O O3B GTP . . . J 2 -15.754 7.254 3.344 0.96 61.04 ? O3B GTP 702 B 1 
HETATM 6 P PB GTP . . . J 2 -15.731 5.891 4.135 0.96 58.11 ? PB GTP 702 B 1 
HETATM 7 O O1B GTP . . . J 2 -16.735 4.991 3.528 0.96 60.69 ? O1B GTP 702 B 1 
HETATM 8 O O2B GTP . . . J 2 -16.084 6.069 5.561 0.96 48.44 ? O2B GTP 702 B 1 
HETATM 9 O O3A GTP . . . J 2 -14.344 5.218 3.976 0.96 56.05 ? O3A GTP 702 B 1 
HETATM 10 P PA GTP . . . J 2 -13.077 5.586 4.89 0.96 51.46 ? PA GTP 702 B 1 
HETATM 11 O O1A GTP . . . J 2 -11.932 6.13 4.009 0.96 49.08 ? O1A GTP 702 B 1 
HETATM 12 O O2A GTP . . . J 2 -13.42 6.644 5.913 0.96 40.6 ? O2A GTP 702 B 1 
HETATM 13 O O5' GTP . . . J 2 -12.571 4.258 5.622 0.96 49.06 ? O5' GTP 702 B 1 
HETATM 14 C C5' GTP . . . J 2 -13.039 3.947 6.929 0.96 51.8 ? C5' GTP 702 B 1 
HETATM 15 C C4' GTP . . . J 2 -12.073 3.844 7.99 0.96 56.09 ? C4' GTP 702 B 1 
HETATM 16 O O4' GTP . . . J 2 -10.995 2.962 7.605 0.96 57.2 ? O4' GTP 702 B 1 
HETATM 17 C C3' GTP . . . J 2 -11.412 5.143 8.179 0.96 52.81 ? C3' GTP 702 B 1 
HETATM 18 O O3' GTP . . . J 2 -12.174 5.981 8.983 0.96 41.33 ? O3' GTP 702 B 1 
HETATM 19 C C2' GTP . . . J 2 -10.115 4.791 8.773 0.96 58 ? C2' GTP 702 B 1 
HETATM 20 O O2' GTP . . . J 2 -10.197 4.84 10.121 0.96 44.89 ? O2' GTP 702 B 1 
HETATM 21 C C1' GTP . . . J 2 -9.86 3.39 8.324 0.96 53 ? C1' GTP 702 B 1 
HETATM 22 N N9 GTP . . . J 2 -8.605 3.139 7.523 0.96 54.49 ? N9 GTP 702 B 1 
HETATM 23 C C8 GTP . . . J 2 -7.7 2.184 7.739 0.96 49.17 ? C8 GTP 702 B 1 
HETATM 24 N N7 GTP . . . J 2 -6.734 2.261 6.811 0.96 48.02 ? N7 GTP 702 B 1 
HETATM 25 C C5 GTP . . . J 2 -7.036 3.279 5.992 0.96 55.64 ? C5 GTP 702 B 1 
HETATM 26 C C6 GTP . . . J 2 -6.395 3.811 4.868 0.96 56.66 ? C6 GTP 702 B 1 
HETATM 27 O O6 GTP . . . J 2 -5.192 3.268 4.373 0.96 50.02 ? O6 GTP 702 B 1 
HETATM 28 N N1 GTP . . . J 2 -6.965 4.857 4.259 0.96 54.43 ? N1 GTP 702 B 1 
HETATM 29 C C2 GTP . . . J 2 -8.116 5.377 4.715 0.96 49.25 ? C2 GTP 702 B 1 
HETATM 30 N N2 GTP . . . J 2 -8.709 6.532 4.01 0.96 61.01 ? N2 GTP 702 B 1 
HETATM 31 N N3 GTP . . . J 2 -8.749 4.896 5.78 0.96 53.96 ? N3 GTP 702 B 1 
HETATM 32 C C4 GTP . . . J 2 -8.226 3.841 6.438 0.96 54 ? C4 GTP 702 B 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    14 
_model_server_stats.query_time_ms           237 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           32 
#