data_4QH5 # _model_server_result.job_id RUzpjZGPqtqsrf3q7NRn4Q _model_server_result.datetime_utc '2024-11-13 06:11:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qh5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":401}' # _entry.id 4QH5 # _exptl.entry_id 4QH5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.615 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DODECYL-BETA-D-MALTOSIDE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.72 _cell.angle_gamma 90 _cell.entry_id 4QH5 _cell.length_a 181.878 _cell.length_b 134.423 _cell.length_c 160.003 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QH5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 I N N ? 2 M N N ? 2 Q N N ? 2 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B O ILE 70 B ILE 71 1_555 K NA NA . B NA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc2 C O PRO 67 C PRO 68 1_555 O NA NA . C NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.192 ? metalc ? metalc3 C O ILE 70 C ILE 71 1_555 O NA NA . C NA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc4 D O ILE 70 D ILE 71 1_555 R NA NA . D NA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? # _chem_comp.formula 'C24 H46 O11' _chem_comp.formula_weight 510.615 _chem_comp.id LMT _chem_comp.mon_nstd_flag . _chem_comp.name DODECYL-BETA-D-MALTOSIDE _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1B C2B LMT sing 194 n n C1B O1B LMT sing 195 n n C1B O5B LMT sing 196 n n C1B H1B LMT sing 197 n n C2B C3B LMT sing 198 n n C2B O2B LMT sing 199 n n C2B H2B LMT sing 200 n n C3B C4B LMT sing 201 n n C3B O3B LMT sing 202 n n C3B H3B LMT sing 203 n n C4B C5B LMT sing 204 n n C4B O4' LMT sing 205 n n C4B H4B LMT sing 206 n n C5B C6B LMT sing 207 n n C5B O5B LMT sing 208 n n C5B H5B LMT sing 209 n n C6B O6B LMT sing 210 n n C6B "H6'2" LMT sing 211 n n C6B "H6'1" LMT sing 212 n n O1B C4' LMT sing 213 n n O2B H2O1 LMT sing 214 n n O3B H3O1 LMT sing 215 n n O4' H4O1 LMT sing 216 n n O6B H6B LMT sing 217 n n C1' C2' LMT sing 218 n n C1' O1' LMT sing 219 n n C1' O5' LMT sing 220 n n C1' H1' LMT sing 221 n n C2' C3' LMT sing 222 n n C2' O2' LMT sing 223 n n C2' H2' LMT sing 224 n n C3' C4' LMT sing 225 n n C3' O3' LMT sing 226 n n C3' H3' LMT sing 227 n n C4' C5' LMT sing 228 n n C4' H4' LMT sing 229 n n C5' C6' LMT sing 230 n n C5' O5' LMT sing 231 n n C5' H5' LMT sing 232 n n C6' O6' LMT sing 233 n n C6' H6D LMT sing 234 n n C6' H6E LMT sing 235 n n O1' C1 LMT sing 236 n n O2' H2O2 LMT sing 237 n n O3' H3O2 LMT sing 238 n n O6' H6' LMT sing 239 n n C1 C2 LMT sing 240 n n C1 H12 LMT sing 241 n n C1 H11 LMT sing 242 n n C2 C3 LMT sing 243 n n C2 H22 LMT sing 244 n n C2 H21 LMT sing 245 n n C3 C4 LMT sing 246 n n C3 H32 LMT sing 247 n n C3 H31 LMT sing 248 n n C4 C5 LMT sing 249 n n C4 H42 LMT sing 250 n n C4 H41 LMT sing 251 n n C5 C6 LMT sing 252 n n C5 H52 LMT sing 253 n n C5 H51 LMT sing 254 n n C6 C7 LMT sing 255 n n C6 H62 LMT sing 256 n n C6 H61 LMT sing 257 n n C7 C8 LMT sing 258 n n C7 H72 LMT sing 259 n n C7 H71 LMT sing 260 n n C8 C9 LMT sing 261 n n C8 H82 LMT sing 262 n n C8 H81 LMT sing 263 n n C9 C10 LMT sing 264 n n C9 H92 LMT sing 265 n n C9 H91 LMT sing 266 n n C10 C11 LMT sing 267 n n C10 H102 LMT sing 268 n n C10 H101 LMT sing 269 n n C11 C12 LMT sing 270 n n C11 H112 LMT sing 271 n n C11 H111 LMT sing 272 n n C12 H123 LMT sing 273 n n C12 H122 LMT sing 274 n n C12 H121 LMT sing 275 n n # _atom_sites.entry_id 4QH5 _atom_sites.fract_transf_matrix[1][1] 0.005498 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001241 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007439 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006407 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 LMT A 1 401 4 LMT LMT . G 2 LMT A 1 402 5 LMT LMT . H 3 CL A 1 403 1 CL CL . I 2 LMT B 1 401 6 LMT LMT . J 3 CL B 1 402 1 CL CL . K 4 NA B 1 403 1 NA NA . L 4 NA C 1 401 1 NA NA . M 2 LMT C 1 402 1 LMT LMT . N 3 CL C 1 403 1 CL CL . O 4 NA C 1 404 1 NA NA . P 5 PLC C 1 405 402 PLC PLC . Q 2 LMT D 1 401 2 LMT LMT . R 4 NA D 1 402 1 NA NA . S 3 CL D 1 403 1 CL CL . T 2 LMT E 1 401 3 LMT LMT . U 3 CL E 1 402 1 CL CL . V 5 PLC E 1 403 402 PLC PLC . W 6 HOH A 1 501 4 HOH HOH . W 6 HOH A 2 502 9 HOH HOH . W 6 HOH A 3 503 18 HOH HOH . W 6 HOH A 4 504 21 HOH HOH . W 6 HOH A 5 505 28 HOH HOH . W 6 HOH A 6 506 37 HOH HOH . W 6 HOH A 7 507 38 HOH HOH . W 6 HOH A 8 508 40 HOH HOH . W 6 HOH A 9 509 4 HOH HOH . W 6 HOH A 10 510 1 HOH HOH . W 6 HOH A 11 511 4 HOH HOH . X 6 HOH B 1 501 17 HOH HOH . X 6 HOH B 2 502 24 HOH HOH . X 6 HOH B 3 503 32 HOH HOH . X 6 HOH B 4 504 39 HOH HOH . X 6 HOH B 5 505 41 HOH HOH . X 6 HOH B 6 506 43 HOH HOH . X 6 HOH B 7 507 47 HOH HOH . X 6 HOH B 8 508 50 HOH HOH . X 6 HOH B 9 509 3 HOH HOH . X 6 HOH B 10 510 21 HOH HOH . X 6 HOH B 11 511 8 HOH HOH . Y 6 HOH C 1 501 1 HOH HOH . Y 6 HOH C 2 502 5 HOH HOH . Y 6 HOH C 3 503 33 HOH HOH . Y 6 HOH C 4 504 42 HOH HOH . Y 6 HOH C 5 505 49 HOH HOH . Y 6 HOH C 6 506 10 HOH HOH . Y 6 HOH C 7 507 11 HOH HOH . Y 6 HOH C 8 508 1 HOH HOH . Y 6 HOH C 9 509 3 HOH HOH . Y 6 HOH C 10 510 7 HOH HOH . Z 6 HOH D 1 501 2 HOH HOH . Z 6 HOH D 2 502 3 HOH HOH . Z 6 HOH D 3 503 6 HOH HOH . Z 6 HOH D 4 504 7 HOH HOH . Z 6 HOH D 5 505 14 HOH HOH . Z 6 HOH D 6 506 15 HOH HOH . Z 6 HOH D 7 507 25 HOH HOH . Z 6 HOH D 8 508 26 HOH HOH . Z 6 HOH D 9 509 30 HOH HOH . Z 6 HOH D 10 510 35 HOH HOH . Z 6 HOH D 11 511 48 HOH HOH . Z 6 HOH D 12 512 14 HOH HOH . Z 6 HOH D 13 513 19 HOH HOH . Z 6 HOH D 14 514 1 HOH HOH . Z 6 HOH D 15 515 2 HOH HOH . Z 6 HOH D 16 516 1 HOH HOH . Z 6 HOH D 17 517 5 HOH HOH . Z 6 HOH D 18 518 10 HOH HOH . Z 6 HOH D 19 519 11 HOH HOH . AA 6 HOH E 1 501 8 HOH HOH . AA 6 HOH E 2 502 22 HOH HOH . AA 6 HOH E 3 503 36 HOH HOH . AA 6 HOH E 4 504 13 HOH HOH . AA 6 HOH E 5 505 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 LMT . . . I 2 47.329 -29.384 38.372 1 81.2 ? C1 LMT 401 B 1 HETATM 2 C C2 LMT . . . I 2 48.484 -28.561 39.098 1 81.6 ? C2 LMT 401 B 1 HETATM 3 C C3 LMT . . . I 2 48.677 -28.884 40.637 1 77.56 ? C3 LMT 401 B 1 HETATM 4 C C4 LMT . . . I 2 49.05 -27.615 41.429 1 80.62 ? C4 LMT 401 B 1 HETATM 5 C C5 LMT . . . I 2 49.705 -27.874 42.823 1 83.76 ? C5 LMT 401 B 1 HETATM 6 C C6 LMT . . . I 2 50.515 -26.642 43.288 1 82.23 ? C6 LMT 401 B 1 HETATM 7 C C7 LMT . . . I 2 51.023 -26.747 44.733 1 84.46 ? C7 LMT 401 B 1 HETATM 8 C C8 LMT . . . I 2 51.878 -25.483 45.071 1 87.21 ? C8 LMT 401 B 1 HETATM 9 C C9 LMT . . . I 2 52.264 -25.417 46.552 1 86.79 ? C9 LMT 401 B 1 HETATM 10 C C10 LMT . . . I 2 53.489 -24.533 46.832 1 86.42 ? C10 LMT 401 B 1 HETATM 11 C C11 LMT . . . I 2 53.569 -24.22 48.357 1 83.87 ? C11 LMT 401 B 1 HETATM 12 C C12 LMT . . . I 2 54.933 -23.62 48.685 1 80.95 ? C12 LMT 401 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #