data_4QJ2 # _model_server_result.job_id wWklljdyQ1IAZovZPKDBXQ _model_server_result.datetime_utc '2024-11-24 12:31:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qj2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":101}' # _entry.id 4QJ2 # _exptl.entry_id 4QJ2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.27 _cell.angle_gamma 90 _cell.entry_id 4QJ2 _cell.length_a 52.185 _cell.length_b 63.341 _cell.length_c 58.769 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QJ2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G,H,J,K,O 1 1 C,D,E,I,L,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4QJ2 _atom_sites.fract_transf_matrix[1][1] 0.019163 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002784 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015788 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017194 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 GOL A 1 101 1 GOL GOL . H 4 SO4 B 1 101 1 SO4 SO4 . I 5 PO4 D 1 101 1 PO4 PO4 . J 6 HOH A 1 201 1 HOH HOH . J 6 HOH A 2 202 2 HOH HOH . J 6 HOH A 3 203 12 HOH HOH . J 6 HOH A 4 204 14 HOH HOH . J 6 HOH A 5 205 18 HOH HOH . J 6 HOH A 6 206 20 HOH HOH . J 6 HOH A 7 207 23 HOH HOH . J 6 HOH A 8 208 26 HOH HOH . J 6 HOH A 9 209 27 HOH HOH . J 6 HOH A 10 210 31 HOH HOH . J 6 HOH A 11 211 33 HOH HOH . J 6 HOH A 12 212 45 HOH HOH . J 6 HOH A 13 213 47 HOH HOH . J 6 HOH A 14 214 49 HOH HOH . J 6 HOH A 15 215 50 HOH HOH . J 6 HOH A 16 216 57 HOH HOH . J 6 HOH A 17 217 58 HOH HOH . J 6 HOH A 18 218 65 HOH HOH . J 6 HOH A 19 219 74 HOH HOH . J 6 HOH A 20 220 83 HOH HOH . J 6 HOH A 21 221 88 HOH HOH . J 6 HOH A 22 222 89 HOH HOH . J 6 HOH A 23 223 92 HOH HOH . J 6 HOH A 24 224 97 HOH HOH . J 6 HOH A 25 225 105 HOH HOH . J 6 HOH A 26 226 107 HOH HOH . J 6 HOH A 27 227 116 HOH HOH . J 6 HOH A 28 228 117 HOH HOH . J 6 HOH A 29 229 130 HOH HOH . J 6 HOH A 30 230 133 HOH HOH . J 6 HOH A 31 231 139 HOH HOH . J 6 HOH A 32 232 140 HOH HOH . J 6 HOH A 33 233 143 HOH HOH . J 6 HOH A 34 234 152 HOH HOH . J 6 HOH A 35 235 162 HOH HOH . J 6 HOH A 36 236 170 HOH HOH . J 6 HOH A 37 237 174 HOH HOH . J 6 HOH A 38 238 175 HOH HOH . J 6 HOH A 39 239 176 HOH HOH . J 6 HOH A 40 240 183 HOH HOH . J 6 HOH A 41 241 192 HOH HOH . J 6 HOH A 42 242 196 HOH HOH . J 6 HOH A 43 243 199 HOH HOH . J 6 HOH A 44 244 202 HOH HOH . J 6 HOH A 45 245 203 HOH HOH . J 6 HOH A 46 246 204 HOH HOH . J 6 HOH A 47 247 209 HOH HOH . J 6 HOH A 48 248 213 HOH HOH . J 6 HOH A 49 249 215 HOH HOH . J 6 HOH A 50 250 216 HOH HOH . J 6 HOH A 51 251 219 HOH HOH . J 6 HOH A 52 252 222 HOH HOH . J 6 HOH A 53 253 226 HOH HOH . J 6 HOH A 54 254 228 HOH HOH . J 6 HOH A 55 255 229 HOH HOH . J 6 HOH A 56 256 230 HOH HOH . J 6 HOH A 57 257 231 HOH HOH . J 6 HOH A 58 258 233 HOH HOH . J 6 HOH A 59 259 234 HOH HOH . J 6 HOH A 60 260 235 HOH HOH . J 6 HOH A 61 261 238 HOH HOH . J 6 HOH A 62 262 249 HOH HOH . J 6 HOH A 63 263 250 HOH HOH . J 6 HOH A 64 264 262 HOH HOH . J 6 HOH A 65 265 263 HOH HOH . J 6 HOH A 66 266 264 HOH HOH . J 6 HOH A 67 267 273 HOH HOH . K 6 HOH B 1 201 3 HOH HOH . K 6 HOH B 2 202 4 HOH HOH . K 6 HOH B 3 203 10 HOH HOH . K 6 HOH B 4 204 11 HOH HOH . K 6 HOH B 5 205 17 HOH HOH . K 6 HOH B 6 206 19 HOH HOH . K 6 HOH B 7 207 24 HOH HOH . K 6 HOH B 8 208 25 HOH HOH . K 6 HOH B 9 209 29 HOH HOH . K 6 HOH B 10 210 30 HOH HOH . K 6 HOH B 11 211 36 HOH HOH . K 6 HOH B 12 212 37 HOH HOH . K 6 HOH B 13 213 39 HOH HOH . K 6 HOH B 14 214 44 HOH HOH . K 6 HOH B 15 215 46 HOH HOH . K 6 HOH B 16 216 60 HOH HOH . K 6 HOH B 17 217 61 HOH HOH . K 6 HOH B 18 218 63 HOH HOH . K 6 HOH B 19 219 73 HOH HOH . K 6 HOH B 20 220 78 HOH HOH . K 6 HOH B 21 221 90 HOH HOH . K 6 HOH B 22 222 96 HOH HOH . K 6 HOH B 23 223 100 HOH HOH . K 6 HOH B 24 224 110 HOH HOH . K 6 HOH B 25 225 112 HOH HOH . K 6 HOH B 26 226 115 HOH HOH . K 6 HOH B 27 227 119 HOH HOH . K 6 HOH B 28 228 120 HOH HOH . K 6 HOH B 29 229 123 HOH HOH . K 6 HOH B 30 230 125 HOH HOH . K 6 HOH B 31 231 127 HOH HOH . K 6 HOH B 32 232 131 HOH HOH . K 6 HOH B 33 233 132 HOH HOH . K 6 HOH B 34 234 134 HOH HOH . K 6 HOH B 35 235 137 HOH HOH . K 6 HOH B 36 236 141 HOH HOH . K 6 HOH B 37 237 148 HOH HOH . K 6 HOH B 38 238 150 HOH HOH . K 6 HOH B 39 239 154 HOH HOH . K 6 HOH B 40 240 157 HOH HOH . K 6 HOH B 41 241 159 HOH HOH . K 6 HOH B 42 242 160 HOH HOH . K 6 HOH B 43 243 167 HOH HOH . K 6 HOH B 44 244 173 HOH HOH . K 6 HOH B 45 245 179 HOH HOH . K 6 HOH B 46 246 180 HOH HOH . K 6 HOH B 47 247 182 HOH HOH . K 6 HOH B 48 248 189 HOH HOH . K 6 HOH B 49 249 190 HOH HOH . K 6 HOH B 50 250 200 HOH HOH . K 6 HOH B 51 251 201 HOH HOH . K 6 HOH B 52 252 207 HOH HOH . K 6 HOH B 53 253 208 HOH HOH . K 6 HOH B 54 254 220 HOH HOH . K 6 HOH B 55 255 225 HOH HOH . K 6 HOH B 56 256 227 HOH HOH . K 6 HOH B 57 257 236 HOH HOH . K 6 HOH B 58 258 255 HOH HOH . K 6 HOH B 59 259 256 HOH HOH . K 6 HOH B 60 260 259 HOH HOH . K 6 HOH B 61 261 260 HOH HOH . K 6 HOH B 62 262 261 HOH HOH . K 6 HOH B 63 263 270 HOH HOH . L 6 HOH C 1 101 188 HOH HOH . L 6 HOH C 2 102 6 HOH HOH . L 6 HOH C 3 103 7 HOH HOH . L 6 HOH C 4 104 8 HOH HOH . L 6 HOH C 5 105 9 HOH HOH . L 6 HOH C 6 106 16 HOH HOH . L 6 HOH C 7 107 22 HOH HOH . L 6 HOH C 8 108 28 HOH HOH . L 6 HOH C 9 109 38 HOH HOH . L 6 HOH C 10 110 54 HOH HOH . L 6 HOH C 11 111 55 HOH HOH . L 6 HOH C 12 112 56 HOH HOH . L 6 HOH C 13 113 62 HOH HOH . L 6 HOH C 14 114 64 HOH HOH . L 6 HOH C 15 115 67 HOH HOH . L 6 HOH C 16 116 68 HOH HOH . L 6 HOH C 17 117 70 HOH HOH . L 6 HOH C 18 118 71 HOH HOH . L 6 HOH C 19 119 72 HOH HOH . L 6 HOH C 20 120 75 HOH HOH . L 6 HOH C 21 121 79 HOH HOH . L 6 HOH C 22 122 80 HOH HOH . L 6 HOH C 23 123 81 HOH HOH . L 6 HOH C 24 124 85 HOH HOH . L 6 HOH C 25 125 86 HOH HOH . L 6 HOH C 26 126 87 HOH HOH . L 6 HOH C 27 127 91 HOH HOH . L 6 HOH C 28 128 94 HOH HOH . L 6 HOH C 29 129 103 HOH HOH . L 6 HOH C 30 130 109 HOH HOH . L 6 HOH C 31 131 111 HOH HOH . L 6 HOH C 32 132 113 HOH HOH . L 6 HOH C 33 133 118 HOH HOH . L 6 HOH C 34 134 121 HOH HOH . L 6 HOH C 35 135 124 HOH HOH . L 6 HOH C 36 136 144 HOH HOH . L 6 HOH C 37 137 145 HOH HOH . L 6 HOH C 38 138 151 HOH HOH . L 6 HOH C 39 139 153 HOH HOH . L 6 HOH C 40 140 156 HOH HOH . L 6 HOH C 41 141 158 HOH HOH . L 6 HOH C 42 142 161 HOH HOH . L 6 HOH C 43 143 163 HOH HOH . L 6 HOH C 44 144 164 HOH HOH . L 6 HOH C 45 145 166 HOH HOH . L 6 HOH C 46 146 171 HOH HOH . L 6 HOH C 47 147 177 HOH HOH . L 6 HOH C 48 148 178 HOH HOH . L 6 HOH C 49 149 184 HOH HOH . L 6 HOH C 50 150 185 HOH HOH . L 6 HOH C 51 151 186 HOH HOH . L 6 HOH C 52 152 193 HOH HOH . L 6 HOH C 53 153 210 HOH HOH . L 6 HOH C 54 154 214 HOH HOH . L 6 HOH C 55 155 217 HOH HOH . L 6 HOH C 56 156 221 HOH HOH . L 6 HOH C 57 157 224 HOH HOH . L 6 HOH C 58 158 239 HOH HOH . L 6 HOH C 59 159 241 HOH HOH . L 6 HOH C 60 160 242 HOH HOH . L 6 HOH C 61 161 243 HOH HOH . L 6 HOH C 62 162 244 HOH HOH . L 6 HOH C 63 163 245 HOH HOH . L 6 HOH C 64 164 251 HOH HOH . L 6 HOH C 65 165 257 HOH HOH . L 6 HOH C 66 166 258 HOH HOH . L 6 HOH C 67 167 265 HOH HOH . L 6 HOH C 68 168 275 HOH HOH . L 6 HOH C 69 169 169 HOH HOH . M 6 HOH D 1 201 237 HOH HOH . M 6 HOH D 2 202 5 HOH HOH . M 6 HOH D 3 203 13 HOH HOH . M 6 HOH D 4 204 15 HOH HOH . M 6 HOH D 5 205 32 HOH HOH . M 6 HOH D 6 206 34 HOH HOH . M 6 HOH D 7 207 35 HOH HOH . M 6 HOH D 8 208 40 HOH HOH . M 6 HOH D 9 209 41 HOH HOH . M 6 HOH D 10 210 42 HOH HOH . M 6 HOH D 11 211 43 HOH HOH . M 6 HOH D 12 212 48 HOH HOH . M 6 HOH D 13 213 51 HOH HOH . M 6 HOH D 14 214 52 HOH HOH . M 6 HOH D 15 215 53 HOH HOH . M 6 HOH D 16 216 59 HOH HOH . M 6 HOH D 17 217 66 HOH HOH . M 6 HOH D 18 218 69 HOH HOH . M 6 HOH D 19 219 76 HOH HOH . M 6 HOH D 20 220 77 HOH HOH . M 6 HOH D 21 221 82 HOH HOH . M 6 HOH D 22 222 95 HOH HOH . M 6 HOH D 23 223 98 HOH HOH . M 6 HOH D 24 224 99 HOH HOH . M 6 HOH D 25 225 101 HOH HOH . M 6 HOH D 26 226 102 HOH HOH . M 6 HOH D 27 227 104 HOH HOH . M 6 HOH D 28 228 106 HOH HOH . M 6 HOH D 29 229 108 HOH HOH . M 6 HOH D 30 230 114 HOH HOH . M 6 HOH D 31 231 126 HOH HOH . M 6 HOH D 32 232 128 HOH HOH . M 6 HOH D 33 233 129 HOH HOH . M 6 HOH D 34 234 135 HOH HOH . M 6 HOH D 35 235 136 HOH HOH . M 6 HOH D 36 236 138 HOH HOH . M 6 HOH D 37 237 142 HOH HOH . M 6 HOH D 38 238 146 HOH HOH . M 6 HOH D 39 239 147 HOH HOH . M 6 HOH D 40 240 149 HOH HOH . M 6 HOH D 41 241 155 HOH HOH . M 6 HOH D 42 242 165 HOH HOH . M 6 HOH D 43 243 168 HOH HOH . M 6 HOH D 44 244 172 HOH HOH . M 6 HOH D 45 245 181 HOH HOH . M 6 HOH D 46 246 187 HOH HOH . M 6 HOH D 47 247 191 HOH HOH . M 6 HOH D 48 248 194 HOH HOH . M 6 HOH D 49 249 195 HOH HOH . M 6 HOH D 50 250 197 HOH HOH . M 6 HOH D 51 251 198 HOH HOH . M 6 HOH D 52 252 205 HOH HOH . M 6 HOH D 53 253 206 HOH HOH . M 6 HOH D 54 254 211 HOH HOH . M 6 HOH D 55 255 212 HOH HOH . M 6 HOH D 56 256 218 HOH HOH . M 6 HOH D 57 257 223 HOH HOH . M 6 HOH D 58 258 240 HOH HOH . M 6 HOH D 59 259 246 HOH HOH . M 6 HOH D 60 260 247 HOH HOH . M 6 HOH D 61 261 252 HOH HOH . M 6 HOH D 62 262 254 HOH HOH . M 6 HOH D 63 263 266 HOH HOH . M 6 HOH D 64 264 267 HOH HOH . M 6 HOH D 65 265 271 HOH HOH . M 6 HOH D 66 266 274 HOH HOH . N 6 HOH F 1 101 21 HOH HOH . N 6 HOH F 2 102 93 HOH HOH . N 6 HOH F 3 103 269 HOH HOH . O 6 HOH G 1 101 84 HOH HOH . O 6 HOH G 2 102 122 HOH HOH . O 6 HOH G 3 103 232 HOH HOH . O 6 HOH G 4 104 248 HOH HOH . O 6 HOH G 5 105 253 HOH HOH . O 6 HOH G 6 106 268 HOH HOH . O 6 HOH G 7 107 272 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 3 -30.755 6.902 13.952 1 33.16 ? C1 GOL 101 A 1 HETATM 2 O O1 GOL . . . G 3 -32.042 6.291 14.129 1 33.98 ? O1 GOL 101 A 1 HETATM 3 C C2 GOL . . . G 3 -29.641 6.111 14.612 1 30.94 ? C2 GOL 101 A 1 HETATM 4 O O2 GOL . . . G 3 -28.397 6.432 14.007 1 32.74 ? O2 GOL 101 A 1 HETATM 5 C C3 GOL . . . G 3 -29.61 6.448 16.112 1 35.86 ? C3 GOL 101 A 1 HETATM 6 O O3 GOL . . . G 3 -28.299 6.532 16.715 1 34.96 ? O3 GOL 101 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #