data_4QJ8
#
_model_server_result.job_id            jjrpz4ZNgeEksK9Agm-2tQ 
_model_server_result.datetime_utc      '2024-10-12 00:25:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4qj8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":102}' 
#
_entry.id    4QJ8 
#
_exptl.entry_id    4QJ8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          97.97 
_cell.angle_gamma         90 
_cell.entry_id            4QJ8 
_cell.length_a            51.306 
_cell.length_b            62.663 
_cell.length_c            57.477 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QJ8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,G,H,I,J,N,O,R 1 1 
C,D,F,K,L,M,P,Q,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 J N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     4QJ8 
_atom_sites.fract_transf_matrix[1][1]    0.019491 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002729 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015958 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017568 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 GOL A 1 101 1 GOL GOL . 
H 3 GOL A 1 102 3 GOL GOL . 
I 4 PO4 A 1 103 5 PO4 PO4 . 
J 3 GOL B 1 101 2 GOL GOL . 
K 4 PO4 C 1 101 1 PO4 PO4 . 
L 4 PO4 D 1 101 2 PO4 PO4 . 
M 4 PO4 D 1 102 6 PO4 PO4 . 
N 5 HOH A 1 201 3 HOH HOH . 
N 5 HOH A 2 202 8 HOH HOH . 
N 5 HOH A 3 203 11 HOH HOH . 
N 5 HOH A 4 204 14 HOH HOH . 
N 5 HOH A 5 205 15 HOH HOH . 
N 5 HOH A 6 206 16 HOH HOH . 
N 5 HOH A 7 207 18 HOH HOH . 
N 5 HOH A 8 208 29 HOH HOH . 
N 5 HOH A 9 209 37 HOH HOH . 
N 5 HOH A 10 210 39 HOH HOH . 
N 5 HOH A 11 211 40 HOH HOH . 
N 5 HOH A 12 212 41 HOH HOH . 
N 5 HOH A 13 213 45 HOH HOH . 
N 5 HOH A 14 214 47 HOH HOH . 
N 5 HOH A 15 215 58 HOH HOH . 
N 5 HOH A 16 216 59 HOH HOH . 
N 5 HOH A 17 217 64 HOH HOH . 
N 5 HOH A 18 218 69 HOH HOH . 
N 5 HOH A 19 219 72 HOH HOH . 
N 5 HOH A 20 220 73 HOH HOH . 
N 5 HOH A 21 221 84 HOH HOH . 
N 5 HOH A 22 222 93 HOH HOH . 
N 5 HOH A 23 223 103 HOH HOH . 
N 5 HOH A 24 224 104 HOH HOH . 
N 5 HOH A 25 225 119 HOH HOH . 
N 5 HOH A 26 226 135 HOH HOH . 
N 5 HOH A 27 227 137 HOH HOH . 
N 5 HOH A 28 228 144 HOH HOH . 
N 5 HOH A 29 229 151 HOH HOH . 
N 5 HOH A 30 230 154 HOH HOH . 
N 5 HOH A 31 231 166 HOH HOH . 
O 5 HOH B 1 201 1 HOH HOH . 
O 5 HOH B 2 202 2 HOH HOH . 
O 5 HOH B 3 203 4 HOH HOH . 
O 5 HOH B 4 204 6 HOH HOH . 
O 5 HOH B 5 205 7 HOH HOH . 
O 5 HOH B 6 206 9 HOH HOH . 
O 5 HOH B 7 207 13 HOH HOH . 
O 5 HOH B 8 208 17 HOH HOH . 
O 5 HOH B 9 209 19 HOH HOH . 
O 5 HOH B 10 210 20 HOH HOH . 
O 5 HOH B 11 211 23 HOH HOH . 
O 5 HOH B 12 212 25 HOH HOH . 
O 5 HOH B 13 213 27 HOH HOH . 
O 5 HOH B 14 214 30 HOH HOH . 
O 5 HOH B 15 215 31 HOH HOH . 
O 5 HOH B 16 216 32 HOH HOH . 
O 5 HOH B 17 217 35 HOH HOH . 
O 5 HOH B 18 218 36 HOH HOH . 
O 5 HOH B 19 219 42 HOH HOH . 
O 5 HOH B 20 220 46 HOH HOH . 
O 5 HOH B 21 221 50 HOH HOH . 
O 5 HOH B 22 222 51 HOH HOH . 
O 5 HOH B 23 223 62 HOH HOH . 
O 5 HOH B 24 224 65 HOH HOH . 
O 5 HOH B 25 225 68 HOH HOH . 
O 5 HOH B 26 226 70 HOH HOH . 
O 5 HOH B 27 227 76 HOH HOH . 
O 5 HOH B 28 228 79 HOH HOH . 
O 5 HOH B 29 229 81 HOH HOH . 
O 5 HOH B 30 230 83 HOH HOH . 
O 5 HOH B 31 231 90 HOH HOH . 
O 5 HOH B 32 232 94 HOH HOH . 
O 5 HOH B 33 233 96 HOH HOH . 
O 5 HOH B 34 234 97 HOH HOH . 
O 5 HOH B 35 235 99 HOH HOH . 
O 5 HOH B 36 236 100 HOH HOH . 
O 5 HOH B 37 237 105 HOH HOH . 
O 5 HOH B 38 238 106 HOH HOH . 
O 5 HOH B 39 239 116 HOH HOH . 
O 5 HOH B 40 240 120 HOH HOH . 
O 5 HOH B 41 241 121 HOH HOH . 
O 5 HOH B 42 242 122 HOH HOH . 
O 5 HOH B 43 243 123 HOH HOH . 
O 5 HOH B 44 244 124 HOH HOH . 
O 5 HOH B 45 245 125 HOH HOH . 
O 5 HOH B 46 246 126 HOH HOH . 
O 5 HOH B 47 247 127 HOH HOH . 
O 5 HOH B 48 248 136 HOH HOH . 
O 5 HOH B 49 249 138 HOH HOH . 
O 5 HOH B 50 250 145 HOH HOH . 
O 5 HOH B 51 251 148 HOH HOH . 
O 5 HOH B 52 252 153 HOH HOH . 
O 5 HOH B 53 253 159 HOH HOH . 
O 5 HOH B 54 254 163 HOH HOH . 
O 5 HOH B 55 255 167 HOH HOH . 
O 5 HOH B 56 256 169 HOH HOH . 
P 5 HOH C 1 201 24 HOH HOH . 
P 5 HOH C 2 202 43 HOH HOH . 
P 5 HOH C 3 203 48 HOH HOH . 
P 5 HOH C 4 204 49 HOH HOH . 
P 5 HOH C 5 205 52 HOH HOH . 
P 5 HOH C 6 206 53 HOH HOH . 
P 5 HOH C 7 207 55 HOH HOH . 
P 5 HOH C 8 208 57 HOH HOH . 
P 5 HOH C 9 209 60 HOH HOH . 
P 5 HOH C 10 210 71 HOH HOH . 
P 5 HOH C 11 211 75 HOH HOH . 
P 5 HOH C 12 212 77 HOH HOH . 
P 5 HOH C 13 213 85 HOH HOH . 
P 5 HOH C 14 214 98 HOH HOH . 
P 5 HOH C 15 215 102 HOH HOH . 
P 5 HOH C 16 216 107 HOH HOH . 
P 5 HOH C 17 217 108 HOH HOH . 
P 5 HOH C 18 218 109 HOH HOH . 
P 5 HOH C 19 219 110 HOH HOH . 
P 5 HOH C 20 220 111 HOH HOH . 
P 5 HOH C 21 221 112 HOH HOH . 
P 5 HOH C 22 222 113 HOH HOH . 
P 5 HOH C 23 223 114 HOH HOH . 
P 5 HOH C 24 224 128 HOH HOH . 
P 5 HOH C 25 225 129 HOH HOH . 
P 5 HOH C 26 226 130 HOH HOH . 
P 5 HOH C 27 227 131 HOH HOH . 
P 5 HOH C 28 228 140 HOH HOH . 
P 5 HOH C 29 229 149 HOH HOH . 
P 5 HOH C 30 230 150 HOH HOH . 
P 5 HOH C 31 231 161 HOH HOH . 
P 5 HOH C 32 232 164 HOH HOH . 
P 5 HOH C 33 233 165 HOH HOH . 
Q 5 HOH D 1 201 10 HOH HOH . 
Q 5 HOH D 2 202 12 HOH HOH . 
Q 5 HOH D 3 203 21 HOH HOH . 
Q 5 HOH D 4 204 22 HOH HOH . 
Q 5 HOH D 5 205 28 HOH HOH . 
Q 5 HOH D 6 206 33 HOH HOH . 
Q 5 HOH D 7 207 38 HOH HOH . 
Q 5 HOH D 8 208 44 HOH HOH . 
Q 5 HOH D 9 209 54 HOH HOH . 
Q 5 HOH D 10 210 56 HOH HOH . 
Q 5 HOH D 11 211 61 HOH HOH . 
Q 5 HOH D 12 212 63 HOH HOH . 
Q 5 HOH D 13 213 67 HOH HOH . 
Q 5 HOH D 14 214 74 HOH HOH . 
Q 5 HOH D 15 215 78 HOH HOH . 
Q 5 HOH D 16 216 80 HOH HOH . 
Q 5 HOH D 17 217 82 HOH HOH . 
Q 5 HOH D 18 218 86 HOH HOH . 
Q 5 HOH D 19 219 88 HOH HOH . 
Q 5 HOH D 20 220 89 HOH HOH . 
Q 5 HOH D 21 221 91 HOH HOH . 
Q 5 HOH D 22 222 92 HOH HOH . 
Q 5 HOH D 23 223 95 HOH HOH . 
Q 5 HOH D 24 224 101 HOH HOH . 
Q 5 HOH D 25 225 115 HOH HOH . 
Q 5 HOH D 26 226 132 HOH HOH . 
Q 5 HOH D 27 227 133 HOH HOH . 
Q 5 HOH D 28 228 134 HOH HOH . 
Q 5 HOH D 29 229 139 HOH HOH . 
Q 5 HOH D 30 230 141 HOH HOH . 
Q 5 HOH D 31 231 142 HOH HOH . 
Q 5 HOH D 32 232 143 HOH HOH . 
Q 5 HOH D 33 233 146 HOH HOH . 
Q 5 HOH D 34 234 147 HOH HOH . 
Q 5 HOH D 35 235 152 HOH HOH . 
Q 5 HOH D 36 236 155 HOH HOH . 
Q 5 HOH D 37 237 156 HOH HOH . 
Q 5 HOH D 38 238 158 HOH HOH . 
Q 5 HOH D 39 239 160 HOH HOH . 
Q 5 HOH D 40 240 162 HOH HOH . 
Q 5 HOH D 41 241 168 HOH HOH . 
Q 5 HOH D 42 242 170 HOH HOH . 
R 5 HOH E 1 101 5 HOH HOH . 
R 5 HOH E 2 102 87 HOH HOH . 
R 5 HOH E 3 103 117 HOH HOH . 
S 5 HOH F 1 101 26 HOH HOH . 
S 5 HOH F 2 102 34 HOH HOH . 
S 5 HOH F 3 103 66 HOH HOH . 
S 5 HOH F 4 104 118 HOH HOH . 
S 5 HOH F 5 105 157 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . H 3 -3.537 20.299 -14.923 1 39.2 ? C1 GOL 102 A 1 
HETATM 2 O O1 GOL . . . H 3 -4.484 21.069 -15.668 1 45.38 ? O1 GOL 102 A 1 
HETATM 3 C C2 GOL . . . H 3 -2.172 20.942 -15.039 1 38.96 ? C2 GOL 102 A 1 
HETATM 4 O O2 GOL . . . H 3 -2.242 22.221 -14.433 1 43.5 ? O2 GOL 102 A 1 
HETATM 5 C C3 GOL . . . H 3 -1.126 20.097 -14.323 1 36.81 ? C3 GOL 102 A 1 
HETATM 6 O O3 GOL . . . H 3 0.209 20.61 -14.497 1 40.27 ? O3 GOL 102 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           6 
#