data_4QK4 # _model_server_result.job_id c7o8wgO-pKaCh4ueWxF-TQ _model_server_result.datetime_utc '2024-11-18 13:25:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qk4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 4QK4 # _exptl.entry_id 4QK4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QK4 _cell.length_a 75 _cell.length_b 75 _cell.length_c 138.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QK4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 4QK4 _atom_sites.fract_transf_matrix[1][1] 0.013333 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013333 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007213 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PIK A 1 501 1 PIK PIJ . D 4 EDO A 1 502 501 EDO EDO . E 4 EDO A 1 503 502 EDO EDO . F 4 EDO A 1 504 503 EDO EDO . G 4 EDO A 1 505 504 EDO EDO . H 4 EDO A 1 506 505 EDO EDO . I 5 HOH A 1 601 506 HOH HOH . I 5 HOH A 2 602 507 HOH HOH . I 5 HOH A 3 603 508 HOH HOH . I 5 HOH A 4 604 509 HOH HOH . I 5 HOH A 5 605 510 HOH HOH . I 5 HOH A 6 606 511 HOH HOH . I 5 HOH A 7 607 512 HOH HOH . I 5 HOH A 8 608 513 HOH HOH . I 5 HOH A 9 609 514 HOH HOH . I 5 HOH A 10 610 515 HOH HOH . I 5 HOH A 11 611 516 HOH HOH . I 5 HOH A 12 612 517 HOH HOH . I 5 HOH A 13 613 518 HOH HOH . I 5 HOH A 14 614 519 HOH HOH . I 5 HOH A 15 615 520 HOH HOH . I 5 HOH A 16 616 521 HOH HOH . I 5 HOH A 17 617 522 HOH HOH . I 5 HOH A 18 618 523 HOH HOH . I 5 HOH A 19 619 524 HOH HOH . I 5 HOH A 20 620 525 HOH HOH . I 5 HOH A 21 621 526 HOH HOH . I 5 HOH A 22 622 527 HOH HOH . I 5 HOH A 23 623 528 HOH HOH . I 5 HOH A 24 624 529 HOH HOH . I 5 HOH A 25 625 530 HOH HOH . I 5 HOH A 26 626 531 HOH HOH . I 5 HOH A 27 627 532 HOH HOH . I 5 HOH A 28 628 533 HOH HOH . I 5 HOH A 29 629 534 HOH HOH . I 5 HOH A 30 630 535 HOH HOH . I 5 HOH A 31 631 536 HOH HOH . I 5 HOH A 32 632 537 HOH HOH . I 5 HOH A 33 633 538 HOH HOH . I 5 HOH A 34 634 539 HOH HOH . I 5 HOH A 35 635 540 HOH HOH . I 5 HOH A 36 636 541 HOH HOH . I 5 HOH A 37 637 542 HOH HOH . I 5 HOH A 38 638 543 HOH HOH . I 5 HOH A 39 639 544 HOH HOH . I 5 HOH A 40 640 545 HOH HOH . I 5 HOH A 41 641 546 HOH HOH . I 5 HOH A 42 642 547 HOH HOH . I 5 HOH A 43 643 548 HOH HOH . I 5 HOH A 44 644 549 HOH HOH . I 5 HOH A 45 645 550 HOH HOH . I 5 HOH A 46 646 551 HOH HOH . I 5 HOH A 47 647 552 HOH HOH . I 5 HOH A 48 648 553 HOH HOH . I 5 HOH A 49 649 554 HOH HOH . I 5 HOH A 50 650 555 HOH HOH . I 5 HOH A 51 651 556 HOH HOH . I 5 HOH A 52 652 557 HOH HOH . I 5 HOH A 53 653 558 HOH HOH . I 5 HOH A 54 654 559 HOH HOH . I 5 HOH A 55 655 560 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 -36.947 37.734 0.722 0.5 74.43 ? C1 EDO 504 A 1 HETATM 2 O O1 EDO . . . F 4 -37.206 36.354 1.002 0.5 81.28 ? O1 EDO 504 A 1 HETATM 3 C C2 EDO . . . F 4 -37.294 38.03 -0.731 0.5 74.44 ? C2 EDO 504 A 1 HETATM 4 O O2 EDO . . . F 4 -38.678 37.74 -0.959 0.5 81.32 ? O2 EDO 504 A 1 # _model_server_stats.io_time_ms 58 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #