data_4QKX # _model_server_result.job_id Uqp2ZTwsiVxzX0HasFbdtA _model_server_result.datetime_utc '2025-02-22 21:16:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qkx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1403}' # _entry.id 4QKX # _exptl.entry_id 4QKX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.471 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[(1R)-1-hydroxy-2-({2-[3-methoxy-4-(2-sulfanylethoxy)phenyl]ethyl}amino)ethyl]benzene-1,2-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QKX _cell.length_a 49.558 _cell.length_b 67.211 _cell.length_c 301.269 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QKX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 255 A CYS 1106 1_555 A SG CYS 340 A CYS 1191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 333 A CYS 1184 1_555 A SG CYS 339 A CYS 1190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? disulf ? disulf3 B SG CYS 22 B CYS 24 1_555 B SG CYS 95 B CYS 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? covale ? covale1 A SG CYS 242 A CYS 1093 1_555 E SAE 35V . A 35V 1403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc1 A OD1 ASN 10 A ASN 861 1_555 D NA NA . A NA 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc2 A OD1 ASN 252 A ASN 1103 1_555 C NA NA . A NA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? metalc ? metalc3 A O CYS 333 A CYS 1184 1_555 C NA NA . A NA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? metalc ? metalc4 A O GLU 336 A GLU 1187 1_555 C NA NA . A NA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.896 ? metalc ? metalc5 A O CYS 339 A CYS 1190 1_555 C NA NA . A NA 1401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? # _chem_comp.formula 'C19 H25 N O5 S' _chem_comp.formula_weight 379.471 _chem_comp.id 35V _chem_comp.mon_nstd_flag . _chem_comp.name 4-[(1R)-1-hydroxy-2-({2-[3-methoxy-4-(2-sulfanylethoxy)phenyl]ethyl}amino)ethyl]benzene-1,2-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag SAE CAL 35V sing 1 n n CAL CAN 35V sing 2 n n CAN OAS 35V sing 3 n n OAS CAX 35V sing 4 n n CAI CAX 35V doub 5 n y CAI CAG 35V sing 6 n y CAX CAY 35V sing 7 n y CAG CAV 35V doub 8 n y CAY OAR 35V sing 9 n n CAY CAK 35V doub 10 n y OAR CAA 35V sing 11 n n CAV CAK 35V sing 12 n y CAV CAO 35V sing 13 n n CAO CAM 35V sing 14 n n CAM NAQ 35V sing 15 n n NAQ CAP 35V sing 16 n n CAP CAZ 35V sing 17 n n OAC CAU 35V sing 18 n n CAJ CAU 35V doub 19 n y CAJ CAW 35V sing 20 n y CAZ CAW 35V sing 21 n n CAZ OAD 35V sing 22 n n CAU CAT 35V sing 23 n y CAW CAH 35V doub 24 n y CAT OAB 35V sing 25 n n CAT CAF 35V doub 26 n y CAH CAF 35V sing 27 n y CAJ H1 35V sing 28 n n OAC H2 35V sing 29 n n OAB H3 35V sing 30 n n CAF H4 35V sing 31 n n CAH H5 35V sing 32 n n CAZ H6 35V sing 33 n n OAD H7 35V sing 34 n n CAP H8 35V sing 35 n n CAP H9 35V sing 36 n n NAQ H10 35V sing 37 n n CAM H12 35V sing 38 n n CAM H13 35V sing 39 n n CAO H14 35V sing 40 n n CAO H15 35V sing 41 n n CAK H16 35V sing 42 n n CAA H17 35V sing 43 n n CAA H18 35V sing 44 n n CAA H19 35V sing 45 n n CAG H20 35V sing 46 n n CAI H21 35V sing 47 n n CAN H22 35V sing 48 n n CAN H23 35V sing 49 n n CAL H24 35V sing 50 n n CAL H25 35V sing 51 n n SAE H26 35V sing 52 n n # _atom_sites.entry_id 4QKX _atom_sites.fract_transf_matrix[1][1] 0.020178 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014879 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003319 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NA A 1 1401 1 NA NA . D 3 NA A 1 1402 2 NA NA . E 4 35V A 1 1403 2 35V DRG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAJ 35V . . . E 4 0.578 -21.668 -48.731 1 95.68 ? CAJ 35V 1403 A 1 HETATM 2 C CAU 35V . . . E 4 -0.638 -22.1 -48.216 1 95.71 ? CAU 35V 1403 A 1 HETATM 3 O OAC 35V . . . E 4 -1.808 -21.943 -48.893 1 91.71 ? OAC 35V 1403 A 1 HETATM 4 C CAT 35V . . . E 4 -0.71 -22.718 -46.972 1 99.77 ? CAT 35V 1403 A 1 HETATM 5 O OAB 35V . . . E 4 -1.939 -23.108 -46.542 1 100.33 ? OAB 35V 1403 A 1 HETATM 6 C CAF 35V . . . E 4 0.431 -22.92 -46.213 1 101.03 ? CAF 35V 1403 A 1 HETATM 7 C CAH 35V . . . E 4 1.647 -22.49 -46.728 1 98.89 ? CAH 35V 1403 A 1 HETATM 8 C CAW 35V . . . E 4 1.724 -21.882 -47.977 1 94.84 ? CAW 35V 1403 A 1 HETATM 9 C CAZ 35V . . . E 4 2.965 -21.461 -48.441 1 88.79 ? CAZ 35V 1403 A 1 HETATM 10 O OAD 35V . . . E 4 3.941 -21.369 -47.391 1 80.99 ? OAD 35V 1403 A 1 HETATM 11 C CAP 35V . . . E 4 3.53 -22.303 -49.595 1 92.9 ? CAP 35V 1403 A 1 HETATM 12 N NAQ 35V . . . E 4 4.83 -21.66 -49.781 1 101.66 ? NAQ 35V 1403 A 1 HETATM 13 C CAM 35V . . . E 4 5.811 -21.922 -50.844 1 110.55 ? CAM 35V 1403 A 1 HETATM 14 C CAO 35V . . . E 4 5.277 -21.645 -52.257 1 112.28 ? CAO 35V 1403 A 1 HETATM 15 C CAV 35V . . . E 4 6.359 -21.733 -53.138 1 106.65 ? CAV 35V 1403 A 1 HETATM 16 C CAK 35V . . . E 4 7.584 -21.258 -52.678 1 106.04 ? CAK 35V 1403 A 1 HETATM 17 C CAY 35V . . . E 4 8.693 -21.274 -53.501 1 114.52 ? CAY 35V 1403 A 1 HETATM 18 O OAR 35V . . . E 4 9.921 -20.853 -53.097 1 119.32 ? OAR 35V 1403 A 1 HETATM 19 C CAA 35V . . . E 4 9.925 -20.405 -51.735 1 118.36 ? CAA 35V 1403 A 1 HETATM 20 C CAG 35V . . . E 4 6.248 -22.219 -54.442 1 104.25 ? CAG 35V 1403 A 1 HETATM 21 C CAI 35V . . . E 4 7.369 -22.242 -55.267 1 109.35 ? CAI 35V 1403 A 1 HETATM 22 C CAX 35V . . . E 4 8.587 -21.775 -54.791 1 119.59 ? CAX 35V 1403 A 1 HETATM 23 O OAS 35V . . . E 4 9.729 -21.77 -55.531 1 131.38 ? OAS 35V 1403 A 1 HETATM 24 C CAN 35V . . . E 4 9.485 -22.309 -56.833 1 135.09 ? CAN 35V 1403 A 1 HETATM 25 C CAL 35V . . . E 4 10.745 -23.022 -57.339 1 134.71 ? CAL 35V 1403 A 1 HETATM 26 S SAE 35V . . . E 4 12.179 -21.892 -57.427 1 198.6 ? SAE 35V 1403 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 26 #