data_4QL0 # _model_server_result.job_id 1LUrvv3NG_2WKXRqaDzXrw _model_server_result.datetime_utc '2024-11-23 02:51:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4ql0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":609}' # _entry.id 4QL0 # _exptl.entry_id 4QL0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QL0 _cell.length_a 106.38 _cell.length_b 136.95 _cell.length_c 110.97 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QL0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_555 -x,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 55.485 # _struct_asym.details ? _struct_asym.entity_id 8 _struct_asym.id J _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 309 n n O1 H1 P6G sing 310 n n C2 C3 P6G sing 311 n n C2 H21 P6G sing 312 n n C2 H22 P6G sing 313 n n C3 O4 P6G sing 314 n n C3 H31 P6G sing 315 n n C3 H32 P6G sing 316 n n O4 C5 P6G sing 317 n n C5 C6 P6G sing 318 n n C5 H51 P6G sing 319 n n C5 H52 P6G sing 320 n n C6 O7 P6G sing 321 n n C6 H61 P6G sing 322 n n C6 H62 P6G sing 323 n n O7 C8 P6G sing 324 n n C8 C9 P6G sing 325 n n C8 H81 P6G sing 326 n n C8 H82 P6G sing 327 n n C9 O10 P6G sing 328 n n C9 H91 P6G sing 329 n n C9 H92 P6G sing 330 n n O10 C11 P6G sing 331 n n C11 C12 P6G sing 332 n n C11 H111 P6G sing 333 n n C11 H112 P6G sing 334 n n C12 O13 P6G sing 335 n n C12 H121 P6G sing 336 n n C12 H122 P6G sing 337 n n O13 C14 P6G sing 338 n n C14 C15 P6G sing 339 n n C14 H141 P6G sing 340 n n C14 H142 P6G sing 341 n n C15 O16 P6G sing 342 n n C15 H151 P6G sing 343 n n C15 H152 P6G sing 344 n n O16 C17 P6G sing 345 n n C17 C18 P6G sing 346 n n C17 H171 P6G sing 347 n n C17 H172 P6G sing 348 n n C18 O19 P6G sing 349 n n C18 H181 P6G sing 350 n n C18 H182 P6G sing 351 n n O19 H19 P6G sing 352 n n # _atom_sites.entry_id 4QL0 _atom_sites.fract_transf_matrix[1][1] 0.0094 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007302 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009011 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PGE A 1 601 1 PGE PGE . C 3 PEG A 1 602 1 PEG PEG . D 4 BOG A 1 603 1 BOG BOG . E 4 BOG A 1 604 3 BOG BOG . F 5 PO4 A 1 605 1 PO4 PO4 . G 4 BOG A 1 606 1 BOG BOG . H 6 1PE A 1 607 1 1PE 1PE . I 7 PG4 A 1 608 1 PG4 PG4 . J 8 P6G A 1 609 1 P6G P6G . K 9 HOH A 1 701 1 HOH HOH . K 9 HOH A 2 702 2 HOH HOH . K 9 HOH A 3 703 3 HOH HOH . K 9 HOH A 4 704 4 HOH HOH . K 9 HOH A 5 705 5 HOH HOH . K 9 HOH A 6 706 6 HOH HOH . K 9 HOH A 7 707 7 HOH HOH . K 9 HOH A 8 708 8 HOH HOH . K 9 HOH A 9 709 9 HOH HOH . K 9 HOH A 10 710 10 HOH HOH . K 9 HOH A 11 711 11 HOH HOH . K 9 HOH A 12 712 12 HOH HOH . K 9 HOH A 13 713 20 HOH HOH . K 9 HOH A 14 714 21 HOH HOH . K 9 HOH A 15 715 22 HOH HOH . K 9 HOH A 16 716 23 HOH HOH . K 9 HOH A 17 717 25 HOH HOH . K 9 HOH A 18 718 26 HOH HOH . K 9 HOH A 19 719 28 HOH HOH . K 9 HOH A 20 720 30 HOH HOH . K 9 HOH A 21 721 33 HOH HOH . K 9 HOH A 22 722 38 HOH HOH . K 9 HOH A 23 723 41 HOH HOH . K 9 HOH A 24 724 43 HOH HOH . K 9 HOH A 25 725 45 HOH HOH . K 9 HOH A 26 726 46 HOH HOH . K 9 HOH A 27 727 53 HOH HOH . K 9 HOH A 28 728 55 HOH HOH . K 9 HOH A 29 729 56 HOH HOH . K 9 HOH A 30 730 62 HOH HOH . K 9 HOH A 31 731 64 HOH HOH . K 9 HOH A 32 732 65 HOH HOH . K 9 HOH A 33 733 70 HOH HOH . K 9 HOH A 34 734 76 HOH HOH . K 9 HOH A 35 735 86 HOH HOH . K 9 HOH A 36 736 89 HOH HOH . K 9 HOH A 37 737 94 HOH HOH . K 9 HOH A 38 738 97 HOH HOH . K 9 HOH A 39 739 109 HOH HOH . K 9 HOH A 40 740 110 HOH HOH . K 9 HOH A 41 741 114 HOH HOH . K 9 HOH A 42 742 120 HOH HOH . K 9 HOH A 43 743 121 HOH HOH . K 9 HOH A 44 744 125 HOH HOH . K 9 HOH A 45 745 133 HOH HOH . K 9 HOH A 46 746 135 HOH HOH . K 9 HOH A 47 747 141 HOH HOH . K 9 HOH A 48 748 143 HOH HOH . K 9 HOH A 49 749 144 HOH HOH . K 9 HOH A 50 750 153 HOH HOH . K 9 HOH A 51 751 160 HOH HOH . K 9 HOH A 52 752 166 HOH HOH . K 9 HOH A 53 753 167 HOH HOH . K 9 HOH A 54 754 169 HOH HOH . K 9 HOH A 55 755 170 HOH HOH . K 9 HOH A 56 756 171 HOH HOH . K 9 HOH A 57 757 172 HOH HOH . K 9 HOH A 58 758 173 HOH HOH . K 9 HOH A 59 759 174 HOH HOH . K 9 HOH A 60 760 182 HOH HOH . K 9 HOH A 61 761 185 HOH HOH . K 9 HOH A 62 762 189 HOH HOH . K 9 HOH A 63 763 190 HOH HOH . K 9 HOH A 64 764 191 HOH HOH . K 9 HOH A 65 765 193 HOH HOH . K 9 HOH A 66 766 196 HOH HOH . K 9 HOH A 67 767 206 HOH HOH . K 9 HOH A 68 768 208 HOH HOH . K 9 HOH A 69 769 213 HOH HOH . K 9 HOH A 70 770 215 HOH HOH . K 9 HOH A 71 771 216 HOH HOH . K 9 HOH A 72 772 217 HOH HOH . K 9 HOH A 73 773 227 HOH HOH . K 9 HOH A 74 774 228 HOH HOH . K 9 HOH A 75 775 229 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P6G . . . J 8 29.324 22.802 -3.038 1 75.7 ? O1 P6G 609 A 1 HETATM 2 C C2 P6G . . . J 8 29.234 22.54 -1.641 1 74.23 ? C2 P6G 609 A 1 HETATM 3 C C3 P6G . . . J 8 27.89 23.095 -1.157 1 74.01 ? C3 P6G 609 A 1 HETATM 4 O O4 P6G . . . J 8 27.272 22.157 -0.26 1 70.33 ? O4 P6G 609 A 1 HETATM 5 C C5 P6G . . . J 8 26.043 22.661 0.266 1 65.99 ? C5 P6G 609 A 1 HETATM 6 C C6 P6G . . . J 8 25.238 21.532 0.908 1 60.09 ? C6 P6G 609 A 1 HETATM 7 O O7 P6G . . . J 8 25.263 20.395 0.067 1 53.37 ? O7 P6G 609 A 1 HETATM 8 C C8 P6G . . . J 8 24.84 19.218 0.717 1 50.89 ? C8 P6G 609 A 1 HETATM 9 C C9 P6G . . . J 8 24.235 18.252 -0.305 1 48.66 ? C9 P6G 609 A 1 HETATM 10 O O10 P6G . . . J 8 22.899 18.662 -0.597 1 46.69 ? O10 P6G 609 A 1 HETATM 11 C C11 P6G . . . J 8 22.113 17.601 -1.115 1 52.51 ? C11 P6G 609 A 1 HETATM 12 C C12 P6G . . . J 8 20.847 18.192 -1.742 1 58.84 ? C12 P6G 609 A 1 HETATM 13 O O13 P6G . . . J 8 21.148 19.24 -2.679 1 60.62 ? O13 P6G 609 A 1 HETATM 14 C C14 P6G . . . J 8 20.028 20.122 -2.965 1 65.63 ? C14 P6G 609 A 1 HETATM 15 C C15 P6G . . . J 8 20.263 21.498 -2.374 1 75.69 ? C15 P6G 609 A 1 HETATM 16 O O16 P6G . . . J 8 21.626 21.947 -2.616 1 83.97 ? O16 P6G 609 A 1 HETATM 17 C C17 P6G . . . J 8 22.31 22.574 -1.494 1 86.65 ? C17 P6G 609 A 1 HETATM 18 C C18 P6G . . . J 8 21.906 24.037 -1.386 1 91.24 ? C18 P6G 609 A 1 HETATM 19 O O19 P6G . . . J 8 22.491 24.762 -2.483 1 96.61 ? O19 P6G 609 A 1 HETATM 20 H H1 P6G . . . J 8 30.183 23.28 -3.233 1 75.92 ? H1 P6G 609 A 1 HETATM 21 H H21 P6G . . . J 8 30.047 23.044 -1.119 1 74.25 ? H21 P6G 609 A 1 HETATM 22 H H22 P6G . . . J 8 29.308 21.474 -1.46 1 73.46 ? H22 P6G 609 A 1 HETATM 23 H H31 P6G . . . J 8 27.249 23.311 -2.009 1 73.71 ? H31 P6G 609 A 1 HETATM 24 H H32 P6G . . . J 8 28.048 24.023 -0.642 1 74.64 ? H32 P6G 609 A 1 HETATM 25 H H51 P6G . . . J 8 25.443 23.094 -0.538 1 66.3 ? H51 P6G 609 A 1 HETATM 26 H H52 P6G . . . J 8 26.257 23.424 1.016 1 65.95 ? H52 P6G 609 A 1 HETATM 27 H H61 P6G . . . J 8 24.201 21.853 1.018 1 59.98 ? H61 P6G 609 A 1 HETATM 28 H H62 P6G . . . J 8 25.667 21.294 1.881 1 60.25 ? H62 P6G 609 A 1 HETATM 29 H H81 P6G . . . J 8 24.09 19.452 1.476 1 51 ? H81 P6G 609 A 1 HETATM 30 H H82 P6G . . . J 8 25.715 18.759 1.169 1 50.82 ? H82 P6G 609 A 1 HETATM 31 H H91 P6G . . . J 8 24.234 17.262 0.123 1 48.4 ? H91 P6G 609 A 1 HETATM 32 H H92 P6G . . . J 8 24.831 18.25 -1.219 1 48.31 ? H92 P6G 609 A 1 HETATM 33 H H111 P6G . . . J 8 22.663 17.046 -1.854 1 52.87 ? H111 P6G 609 A 1 HETATM 34 H H112 P6G . . . J 8 21.839 16.932 -0.3 1 51.81 ? H112 P6G 609 A 1 HETATM 35 H H121 P6G . . . J 8 20.276 17.393 -2.214 1 58.89 ? H121 P6G 609 A 1 HETATM 36 H H122 P6G . . . J 8 20.271 18.626 -0.933 1 59.77 ? H122 P6G 609 A 1 HETATM 37 H H141 P6G . . . J 8 19.928 20.248 -4.038 1 65.67 ? H141 P6G 609 A 1 HETATM 38 H H142 P6G . . . J 8 19.095 19.722 -2.571 1 65.04 ? H142 P6G 609 A 1 HETATM 39 H H151 P6G . . . J 8 19.562 22.184 -2.843 1 75.78 ? H151 P6G 609 A 1 HETATM 40 H H152 P6G . . . J 8 20.048 21.432 -1.314 1 76.1 ? H152 P6G 609 A 1 HETATM 41 H H171 P6G . . . J 8 22.1 22.057 -0.566 1 86.8 ? H171 P6G 609 A 1 HETATM 42 H H172 P6G . . . J 8 23.382 22.566 -1.658 1 86.08 ? H172 P6G 609 A 1 HETATM 43 H H181 P6G . . . J 8 20.821 24.129 -1.417 1 91.07 ? H181 P6G 609 A 1 HETATM 44 H H182 P6G . . . J 8 22.276 24.437 -0.442 1 91.4 ? H182 P6G 609 A 1 HETATM 45 H H19 P6G . . . J 8 22.23 24.337 -3.351 1 96.99 ? H19 P6G 609 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 45 #