data_4QL5
#
_model_server_result.job_id            faGHs5ViQVGjo5ATohHoew 
_model_server_result.datetime_utc      '2024-11-09 02:43:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4ql5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":102}' 
#
_entry.id    4QL5 
#
_exptl.entry_id    4QL5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4QL5 
_cell.length_a            83.636 
_cell.length_b            83.636 
_cell.length_c            50.575 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QL5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+3/2 0 -1 0 -1 0 0 0 0 -1 83.636 83.636 75.8625 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE1 GLU 9 A GLU 8 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc2 A OE2 GLU 11 A GLU 10 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? 
metalc ? metalc3 A OE1 GLU 11 A GLU 10 1_555 C ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? 
metalc ? metalc4 C ZN ZN . A ZN 101 1_555 G O HOH . A HOH 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? 
metalc ? metalc5 C ZN ZN . A ZN 101 1_555 B NE2 HIS 31 B HIS 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc6 B OE2 GLU 26 B GLU 25 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
metalc ? metalc7 B O GLY 30 B GLY 29 1_555 D ZN ZN . B ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 122 n n 
C1 C2 GOL sing 123 n n 
C1 H11 GOL sing 124 n n 
C1 H12 GOL sing 125 n n 
O1 HO1 GOL sing 126 n n 
C2 O2 GOL sing 127 n n 
C2 C3 GOL sing 128 n n 
C2 H2 GOL sing 129 n n 
O2 HO2 GOL sing 130 n n 
C3 O3 GOL sing 131 n n 
C3 H31 GOL sing 132 n n 
C3 H32 GOL sing 133 n n 
O3 HO3 GOL sing 134 n n 
#
_atom_sites.entry_id                     4QL5 
_atom_sites.fract_transf_matrix[1][1]    0.011957 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011957 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019773 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 101 4 ZN ZN . 
D 2 ZN B 1 101 3 ZN ZN . 
E 3 GOL B 1 102 1 GOL GOL . 
F 4 ACT B 1 103 2 ACT ACT . 
G 5 HOH A 1 201 1 HOH HOH . 
G 5 HOH A 2 202 2 HOH HOH . 
G 5 HOH A 3 203 3 HOH HOH . 
G 5 HOH A 4 204 5 HOH HOH . 
G 5 HOH A 5 205 6 HOH HOH . 
G 5 HOH A 6 206 9 HOH HOH . 
G 5 HOH A 7 207 14 HOH HOH . 
G 5 HOH A 8 208 18 HOH HOH . 
G 5 HOH A 9 209 24 HOH HOH . 
G 5 HOH A 10 210 25 HOH HOH . 
G 5 HOH A 11 211 26 HOH HOH . 
G 5 HOH A 12 212 27 HOH HOH . 
G 5 HOH A 13 213 30 HOH HOH . 
G 5 HOH A 14 214 33 HOH HOH . 
G 5 HOH A 15 215 35 HOH HOH . 
G 5 HOH A 16 216 36 HOH HOH . 
G 5 HOH A 17 217 40 HOH HOH . 
G 5 HOH A 18 218 43 HOH HOH . 
G 5 HOH A 19 219 49 HOH HOH . 
G 5 HOH A 20 220 50 HOH HOH . 
G 5 HOH A 21 221 53 HOH HOH . 
G 5 HOH A 22 222 55 HOH HOH . 
G 5 HOH A 23 223 64 HOH HOH . 
G 5 HOH A 24 224 66 HOH HOH . 
G 5 HOH A 25 225 67 HOH HOH . 
G 5 HOH A 26 226 68 HOH HOH . 
G 5 HOH A 27 227 73 HOH HOH . 
G 5 HOH A 28 228 87 HOH HOH . 
G 5 HOH A 29 229 88 HOH HOH . 
G 5 HOH A 30 230 99 HOH HOH . 
G 5 HOH A 31 231 100 HOH HOH . 
G 5 HOH A 32 232 104 HOH HOH . 
G 5 HOH A 33 233 106 HOH HOH . 
G 5 HOH A 34 234 109 HOH HOH . 
G 5 HOH A 35 235 112 HOH HOH . 
G 5 HOH A 36 236 120 HOH HOH . 
G 5 HOH A 37 237 121 HOH HOH . 
H 5 HOH B 1 201 4 HOH HOH . 
H 5 HOH B 2 202 7 HOH HOH . 
H 5 HOH B 3 203 8 HOH HOH . 
H 5 HOH B 4 204 11 HOH HOH . 
H 5 HOH B 5 205 12 HOH HOH . 
H 5 HOH B 6 206 13 HOH HOH . 
H 5 HOH B 7 207 15 HOH HOH . 
H 5 HOH B 8 208 16 HOH HOH . 
H 5 HOH B 9 209 19 HOH HOH . 
H 5 HOH B 10 210 21 HOH HOH . 
H 5 HOH B 11 211 22 HOH HOH . 
H 5 HOH B 12 212 23 HOH HOH . 
H 5 HOH B 13 213 28 HOH HOH . 
H 5 HOH B 14 214 29 HOH HOH . 
H 5 HOH B 15 215 31 HOH HOH . 
H 5 HOH B 16 216 32 HOH HOH . 
H 5 HOH B 17 217 34 HOH HOH . 
H 5 HOH B 18 218 37 HOH HOH . 
H 5 HOH B 19 219 38 HOH HOH . 
H 5 HOH B 20 220 39 HOH HOH . 
H 5 HOH B 21 221 41 HOH HOH . 
H 5 HOH B 22 222 42 HOH HOH . 
H 5 HOH B 23 223 44 HOH HOH . 
H 5 HOH B 24 224 46 HOH HOH . 
H 5 HOH B 25 225 48 HOH HOH . 
H 5 HOH B 26 226 51 HOH HOH . 
H 5 HOH B 27 227 52 HOH HOH . 
H 5 HOH B 28 228 56 HOH HOH . 
H 5 HOH B 29 229 58 HOH HOH . 
H 5 HOH B 30 230 59 HOH HOH . 
H 5 HOH B 31 231 60 HOH HOH . 
H 5 HOH B 32 232 61 HOH HOH . 
H 5 HOH B 33 233 62 HOH HOH . 
H 5 HOH B 34 234 72 HOH HOH . 
H 5 HOH B 35 235 74 HOH HOH . 
H 5 HOH B 36 236 75 HOH HOH . 
H 5 HOH B 37 237 76 HOH HOH . 
H 5 HOH B 38 238 77 HOH HOH . 
H 5 HOH B 39 239 78 HOH HOH . 
H 5 HOH B 40 240 81 HOH HOH . 
H 5 HOH B 41 241 82 HOH HOH . 
H 5 HOH B 42 242 84 HOH HOH . 
H 5 HOH B 43 243 90 HOH HOH . 
H 5 HOH B 44 244 91 HOH HOH . 
H 5 HOH B 45 245 92 HOH HOH . 
H 5 HOH B 46 246 93 HOH HOH . 
H 5 HOH B 47 247 95 HOH HOH . 
H 5 HOH B 48 248 96 HOH HOH . 
H 5 HOH B 49 249 103 HOH HOH . 
H 5 HOH B 50 250 107 HOH HOH . 
H 5 HOH B 51 251 108 HOH HOH . 
H 5 HOH B 52 252 115 HOH HOH . 
H 5 HOH B 53 253 116 HOH HOH . 
H 5 HOH B 54 254 117 HOH HOH . 
H 5 HOH B 55 255 122 HOH HOH . 
H 5 HOH B 56 256 123 HOH HOH . 
H 5 HOH B 57 257 124 HOH HOH . 
H 5 HOH B 58 258 125 HOH HOH . 
H 5 HOH B 59 259 126 HOH HOH . 
H 5 HOH B 60 260 127 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 60.998 55.022 28.075 1 93.28 ? C1 GOL 102 B 1 
HETATM 2 O O1 GOL . . . E 3 61.812 54.912 26.928 1 95.69 ? O1 GOL 102 B 1 
HETATM 3 C C2 GOL . . . E 3 61.527 54.086 29.155 1 90.52 ? C2 GOL 102 B 1 
HETATM 4 O O2 GOL . . . E 3 62.845 54.447 29.501 1 98.26 ? O2 GOL 102 B 1 
HETATM 5 C C3 GOL . . . E 3 60.635 54.141 30.388 1 84.01 ? C3 GOL 102 B 1 
HETATM 6 O O3 GOL . . . E 3 60.974 53.072 31.242 1 92.23 ? O3 GOL 102 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#