data_4QLB # _model_server_result.job_id 55sNlJAESxx13Rz0Dxiq3w _model_server_result.datetime_utc '2024-12-22 06:15:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qlb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":704}' # _entry.id 4QLB # _exptl.entry_id 4QLB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.78 _cell.angle_gamma 90 _cell.entry_id 4QLB _cell.length_a 94.59 _cell.length_b 162.88 _cell.length_c 115.79 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QLB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J,K,L,M,N,U,V,W,Z 1 1 C,D,G,H,O,P,Q,R,S,T,X,Y,AA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 N N N ? 4 R N N ? 4 U N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 4QLB _atom_sites.fract_transf_matrix[1][1] 0.010572 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001069 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 SO4 A 1 701 1 SO4 SO4 . J 3 SO4 A 1 702 6 SO4 SO4 . K 3 SO4 C 1 701 2 SO4 SO4 . L 3 SO4 C 1 702 7 SO4 SO4 . M 3 SO4 C 1 703 10 SO4 SO4 . N 4 GOL C 1 704 2 GOL GOL . O 3 SO4 D 1 701 3 SO4 SO4 . P 3 SO4 D 1 702 5 SO4 SO4 . Q 3 SO4 D 1 703 9 SO4 SO4 . R 4 GOL D 1 704 3 GOL GOL . S 3 SO4 B 1 701 4 SO4 SO4 . T 3 SO4 B 1 702 8 SO4 SO4 . U 4 GOL G 1 401 1 GOL GOL . V 5 HOH A 1 801 12 HOH HOH . V 5 HOH A 2 802 13 HOH HOH . V 5 HOH A 3 803 17 HOH HOH . V 5 HOH A 4 804 18 HOH HOH . V 5 HOH A 5 805 31 HOH HOH . V 5 HOH A 6 806 32 HOH HOH . V 5 HOH A 7 807 36 HOH HOH . V 5 HOH A 8 808 41 HOH HOH . V 5 HOH A 9 809 42 HOH HOH . V 5 HOH A 10 810 49 HOH HOH . V 5 HOH A 11 811 52 HOH HOH . V 5 HOH A 12 812 56 HOH HOH . V 5 HOH A 13 813 58 HOH HOH . V 5 HOH A 14 814 79 HOH HOH . V 5 HOH A 15 815 90 HOH HOH . V 5 HOH A 16 816 123 HOH HOH . V 5 HOH A 17 817 126 HOH HOH . V 5 HOH A 18 818 127 HOH HOH . V 5 HOH A 19 819 150 HOH HOH . V 5 HOH A 20 820 184 HOH HOH . V 5 HOH A 21 821 232 HOH HOH . V 5 HOH A 22 822 268 HOH HOH . V 5 HOH A 23 823 271 HOH HOH . V 5 HOH A 24 824 279 HOH HOH . V 5 HOH A 25 825 281 HOH HOH . V 5 HOH A 26 826 302 HOH HOH . V 5 HOH A 27 827 320 HOH HOH . V 5 HOH A 28 828 322 HOH HOH . V 5 HOH A 29 829 323 HOH HOH . W 5 HOH C 1 801 2 HOH HOH . W 5 HOH C 2 802 4 HOH HOH . W 5 HOH C 3 803 7 HOH HOH . W 5 HOH C 4 804 10 HOH HOH . W 5 HOH C 5 805 16 HOH HOH . W 5 HOH C 6 806 21 HOH HOH . W 5 HOH C 7 807 30 HOH HOH . W 5 HOH C 8 808 34 HOH HOH . W 5 HOH C 9 809 37 HOH HOH . W 5 HOH C 10 810 76 HOH HOH . W 5 HOH C 11 811 78 HOH HOH . W 5 HOH C 12 812 84 HOH HOH . W 5 HOH C 13 813 103 HOH HOH . W 5 HOH C 14 814 112 HOH HOH . W 5 HOH C 15 815 120 HOH HOH . W 5 HOH C 16 816 125 HOH HOH . W 5 HOH C 17 817 137 HOH HOH . W 5 HOH C 18 818 154 HOH HOH . W 5 HOH C 19 819 158 HOH HOH . W 5 HOH C 20 820 162 HOH HOH . W 5 HOH C 21 821 166 HOH HOH . W 5 HOH C 22 822 173 HOH HOH . W 5 HOH C 23 823 177 HOH HOH . W 5 HOH C 24 824 212 HOH HOH . W 5 HOH C 25 825 219 HOH HOH . W 5 HOH C 26 826 227 HOH HOH . W 5 HOH C 27 827 234 HOH HOH . W 5 HOH C 28 828 244 HOH HOH . W 5 HOH C 29 829 274 HOH HOH . W 5 HOH C 30 830 298 HOH HOH . W 5 HOH C 31 831 314 HOH HOH . W 5 HOH C 32 832 325 HOH HOH . W 5 HOH C 33 833 326 HOH HOH . W 5 HOH C 34 834 327 HOH HOH . X 5 HOH D 1 801 9 HOH HOH . X 5 HOH D 2 802 23 HOH HOH . X 5 HOH D 3 803 26 HOH HOH . X 5 HOH D 4 804 40 HOH HOH . X 5 HOH D 5 805 46 HOH HOH . X 5 HOH D 6 806 50 HOH HOH . X 5 HOH D 7 807 55 HOH HOH . X 5 HOH D 8 808 89 HOH HOH . X 5 HOH D 9 809 102 HOH HOH . X 5 HOH D 10 810 113 HOH HOH . X 5 HOH D 11 811 149 HOH HOH . X 5 HOH D 12 812 157 HOH HOH . X 5 HOH D 13 813 176 HOH HOH . X 5 HOH D 14 814 200 HOH HOH . X 5 HOH D 15 815 239 HOH HOH . X 5 HOH D 16 816 263 HOH HOH . X 5 HOH D 17 817 328 HOH HOH . Y 5 HOH B 1 801 5 HOH HOH . Y 5 HOH B 2 802 11 HOH HOH . Y 5 HOH B 3 803 22 HOH HOH . Y 5 HOH B 4 804 28 HOH HOH . Y 5 HOH B 5 805 39 HOH HOH . Y 5 HOH B 6 806 53 HOH HOH . Y 5 HOH B 7 807 54 HOH HOH . Y 5 HOH B 8 808 59 HOH HOH . Y 5 HOH B 9 809 64 HOH HOH . Y 5 HOH B 10 810 70 HOH HOH . Y 5 HOH B 11 811 73 HOH HOH . Y 5 HOH B 12 812 75 HOH HOH . Y 5 HOH B 13 813 87 HOH HOH . Y 5 HOH B 14 814 94 HOH HOH . Y 5 HOH B 15 815 98 HOH HOH . Y 5 HOH B 16 816 105 HOH HOH . Y 5 HOH B 17 817 115 HOH HOH . Y 5 HOH B 18 818 152 HOH HOH . Y 5 HOH B 19 819 209 HOH HOH . Y 5 HOH B 20 820 243 HOH HOH . Y 5 HOH B 21 821 247 HOH HOH . Y 5 HOH B 22 822 250 HOH HOH . Y 5 HOH B 23 823 258 HOH HOH . Y 5 HOH B 24 824 270 HOH HOH . Y 5 HOH B 25 825 282 HOH HOH . Y 5 HOH B 26 826 304 HOH HOH . Y 5 HOH B 27 827 305 HOH HOH . Y 5 HOH B 28 828 308 HOH HOH . Y 5 HOH B 29 829 324 HOH HOH . Y 5 HOH B 30 830 329 HOH HOH . Z 5 HOH G 1 501 117 HOH HOH . Z 5 HOH G 2 502 299 HOH HOH . AA 5 HOH H 1 401 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . N 4 39.079 -56.356 64.221 1 78.16 ? C1 GOL 704 C 1 HETATM 2 O O1 GOL . . . N 4 39.65 -56.255 65.507 1 76.24 ? O1 GOL 704 C 1 HETATM 3 C C2 GOL . . . N 4 38.843 -54.963 63.646 1 76.9 ? C2 GOL 704 C 1 HETATM 4 O O2 GOL . . . N 4 37.526 -54.547 63.929 1 71.65 ? O2 GOL 704 C 1 HETATM 5 C C3 GOL . . . N 4 39.065 -54.982 62.137 1 80.45 ? C3 GOL 704 C 1 HETATM 6 O O3 GOL . . . N 4 38.146 -55.86 61.524 1 82.21 ? O3 GOL 704 C 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #