data_4QLZ # _model_server_result.job_id YDRSdqe5b1IKTkPpFzYAYw _model_server_result.datetime_utc '2024-11-05 01:21:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qlz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":401}' # _entry.id 4QLZ # _exptl.entry_id 4QLZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4QLZ _cell.length_a 76.08 _cell.length_b 76.08 _cell.length_c 123.41 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QLZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 113 A ASP 113 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? metalc ? metalc2 A OD2 ASP 118 A ASP 118 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc3 A OD1 ASP 118 A ASP 118 1_555 D CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc4 A OD2 ASP 145 A ASP 145 1_555 F CO CO . A CO 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc5 A OD1 ASP 150 A ASP 150 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc6 A OD2 ASP 150 A ASP 150 1_555 F CO CO . A CO 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc7 C CO CO . A CO 401 1_555 G O3 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? metalc ? metalc8 C CO CO . A CO 401 1_555 G O2 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc9 C CO CO . A CO 401 1_555 M O HOH . A HOH 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc10 D CO CO . A CO 402 1_555 G O1 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc11 D CO CO . A CO 402 1_555 G O3 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc12 D CO CO . A CO 402 1_555 M O HOH . A HOH 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc13 D CO CO . A CO 402 1_555 M O HOH . A HOH 522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc14 E CO CO . A CO 403 1_555 G O4 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.912 ? metalc ? metalc15 E CO CO . A CO 403 1_555 M O HOH . A HOH 539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc16 E CO CO . A CO 403 1_555 M O HOH . A HOH 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc17 F CO CO . A CO 404 1_555 G O2 PO4 . A PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc18 F CO CO . A CO 404 1_555 M O HOH . A HOH 519 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc19 F CO CO . A CO 404 1_555 M O HOH . A HOH 538 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc20 B OE2 GLU 56 B GLU 56 1_555 J CO CO . B CO 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.619 ? metalc ? metalc21 B OD2 ASP 113 B ASP 113 1_555 H CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc22 B OD2 ASP 118 B ASP 118 1_555 H CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? metalc ? metalc23 B OD1 ASP 118 B ASP 118 1_555 I CO CO . B CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc24 B OD2 ASP 145 B ASP 145 1_555 K CO CO . B CO 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc25 B OD1 ASP 150 B ASP 150 1_555 H CO CO . B CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? metalc ? metalc26 B OD2 ASP 150 B ASP 150 1_555 K CO CO . B CO 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc27 H CO CO . B CO 401 1_555 L O3 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc28 H CO CO . B CO 401 1_555 L O2 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc29 H CO CO . B CO 401 1_555 N O HOH . B HOH 523 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc30 I CO CO . B CO 402 1_555 L O1 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc31 I CO CO . B CO 402 1_555 L O3 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc32 I CO CO . B CO 402 1_555 N O HOH . B HOH 514 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc33 J CO CO . B CO 403 1_555 L O4 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? metalc ? metalc34 K CO CO . B CO 404 1_555 L O2 PO4 . B PO4 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.907 ? metalc ? metalc35 K CO CO . B CO 404 1_555 N O HOH . B HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc36 K CO CO . B CO 404 1_555 N O HOH . B HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4QLZ _atom_sites.fract_transf_matrix[1][1] 0.013144 _atom_sites.fract_transf_matrix[1][2] 0.007589 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008103 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CO A 1 401 401 CO CO . D 2 CO A 1 402 402 CO CO . E 2 CO A 1 403 403 CO CO . F 2 CO A 1 404 404 CO CO . G 3 PO4 A 1 405 405 PO4 PO4 . H 2 CO B 1 401 401 CO CO . I 2 CO B 1 402 402 CO CO . J 2 CO B 1 403 403 CO CO . K 2 CO B 1 404 404 CO CO . L 3 PO4 B 1 405 405 PO4 PO4 . M 4 HOH A 1 501 2 HOH HOH . M 4 HOH A 2 502 3 HOH HOH . M 4 HOH A 3 503 7 HOH HOH . M 4 HOH A 4 504 8 HOH HOH . M 4 HOH A 5 505 9 HOH HOH . M 4 HOH A 6 506 11 HOH HOH . M 4 HOH A 7 507 13 HOH HOH . M 4 HOH A 8 508 14 HOH HOH . M 4 HOH A 9 509 17 HOH HOH . M 4 HOH A 10 510 19 HOH HOH . M 4 HOH A 11 511 20 HOH HOH . M 4 HOH A 12 512 23 HOH HOH . M 4 HOH A 13 513 25 HOH HOH . M 4 HOH A 14 514 26 HOH HOH . M 4 HOH A 15 515 28 HOH HOH . M 4 HOH A 16 516 30 HOH HOH . M 4 HOH A 17 517 31 HOH HOH . M 4 HOH A 18 518 32 HOH HOH . M 4 HOH A 19 519 33 HOH HOH . M 4 HOH A 20 520 34 HOH HOH . M 4 HOH A 21 521 35 HOH HOH . M 4 HOH A 22 522 37 HOH HOH . M 4 HOH A 23 523 38 HOH HOH . M 4 HOH A 24 524 39 HOH HOH . M 4 HOH A 25 525 40 HOH HOH . M 4 HOH A 26 526 42 HOH HOH . M 4 HOH A 27 527 43 HOH HOH . M 4 HOH A 28 528 44 HOH HOH . M 4 HOH A 29 529 45 HOH HOH . M 4 HOH A 30 530 47 HOH HOH . M 4 HOH A 31 531 48 HOH HOH . M 4 HOH A 32 532 49 HOH HOH . M 4 HOH A 33 533 52 HOH HOH . M 4 HOH A 34 534 54 HOH HOH . M 4 HOH A 35 535 55 HOH HOH . M 4 HOH A 36 536 59 HOH HOH . M 4 HOH A 37 537 61 HOH HOH . M 4 HOH A 38 538 62 HOH HOH . M 4 HOH A 39 539 63 HOH HOH . M 4 HOH A 40 540 66 HOH HOH . M 4 HOH A 41 541 67 HOH HOH . M 4 HOH A 42 542 69 HOH HOH . M 4 HOH A 43 543 70 HOH HOH . M 4 HOH A 44 544 72 HOH HOH . M 4 HOH A 45 545 74 HOH HOH . M 4 HOH A 46 546 75 HOH HOH . M 4 HOH A 47 547 78 HOH HOH . M 4 HOH A 48 548 80 HOH HOH . N 4 HOH B 1 501 1 HOH HOH . N 4 HOH B 2 502 4 HOH HOH . N 4 HOH B 3 503 5 HOH HOH . N 4 HOH B 4 504 6 HOH HOH . N 4 HOH B 5 505 10 HOH HOH . N 4 HOH B 6 506 12 HOH HOH . N 4 HOH B 7 507 15 HOH HOH . N 4 HOH B 8 508 16 HOH HOH . N 4 HOH B 9 509 18 HOH HOH . N 4 HOH B 10 510 21 HOH HOH . N 4 HOH B 11 511 22 HOH HOH . N 4 HOH B 12 512 24 HOH HOH . N 4 HOH B 13 513 27 HOH HOH . N 4 HOH B 14 514 29 HOH HOH . N 4 HOH B 15 515 36 HOH HOH . N 4 HOH B 16 516 41 HOH HOH . N 4 HOH B 17 517 46 HOH HOH . N 4 HOH B 18 518 50 HOH HOH . N 4 HOH B 19 519 51 HOH HOH . N 4 HOH B 20 520 53 HOH HOH . N 4 HOH B 21 521 56 HOH HOH . N 4 HOH B 22 522 57 HOH HOH . N 4 HOH B 23 523 58 HOH HOH . N 4 HOH B 24 524 60 HOH HOH . N 4 HOH B 25 525 64 HOH HOH . N 4 HOH B 26 526 65 HOH HOH . N 4 HOH B 27 527 68 HOH HOH . N 4 HOH B 28 528 71 HOH HOH . N 4 HOH B 29 529 73 HOH HOH . N 4 HOH B 30 530 76 HOH HOH . N 4 HOH B 31 531 77 HOH HOH . N 4 HOH B 32 532 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x 64.761 _atom_site.Cartn_y 75.104 _atom_site.Cartn_z -13.049 _atom_site.occupancy 0.66 _atom_site.B_iso_or_equiv 79.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 401 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #