data_4QMW # _model_server_result.job_id -SFBk3_NoHsDFwWoGTVing _model_server_result.datetime_utc '2024-11-24 02:25:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qmw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 4QMW # _exptl.entry_id 4QMW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 319.364 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-cyclopentyl-3-(1H-pyrrolo[2,3-b]pyridin-5-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.01 _cell.angle_gamma 90 _cell.entry_id 4QMW _cell.length_a 47.763 _cell.length_b 55.337 _cell.length_c 60.233 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QMW _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASN 184 A ASN 177 1_555 A N TPO 185 A TPO 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C TPO 185 A TPO 178 1_555 A N PHE 186 A PHE 179 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C17 H17 N7' _chem_comp.formula_weight 319.364 _chem_comp.id KS1 _chem_comp.mon_nstd_flag . _chem_comp.name 1-cyclopentyl-3-(1H-pyrrolo[2,3-b]pyridin-5-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAI CAG KS1 sing 188 n n CAI CAW KS1 sing 189 n n CAG CAH KS1 sing 190 n n CAH CAJ KS1 sing 191 n n CAJ CAW KS1 sing 192 n n CAW NAX KS1 sing 193 n n NAX NAN KS1 sing 194 n y NAX C4 KS1 sing 195 n y NAN CAR KS1 doub 196 n y C4 N3 KS1 doub 197 n y C4 C5 KS1 sing 198 n y N3 C2 KS1 sing 199 n y C2 N1 KS1 doub 200 n y N1 C6 KS1 sing 201 n y C6 NAA KS1 sing 202 n n C6 C5 KS1 doub 203 n y C5 CAR KS1 sing 204 n y CAR CAP KS1 sing 205 n y CAP CAF KS1 doub 206 n y CAP CAE KS1 sing 207 n y CAF CAS KS1 sing 208 n y CAS CAD KS1 sing 209 n y CAS CAT KS1 doub 210 n y CAD CAB KS1 doub 211 n y CAB NAO KS1 sing 212 n y NAO CAT KS1 sing 213 n y CAT NAM KS1 sing 214 n y NAM CAE KS1 doub 215 n y CAI HAI KS1 sing 216 n n CAI HAIA KS1 sing 217 n n CAG HAG KS1 sing 218 n n CAG HAGA KS1 sing 219 n n CAH HAH KS1 sing 220 n n CAH HAHA KS1 sing 221 n n CAJ HAJ KS1 sing 222 n n CAJ HAJA KS1 sing 223 n n CAW HAW KS1 sing 224 n n C2 H2 KS1 sing 225 n n NAA HNAA KS1 sing 226 n n NAA HNAB KS1 sing 227 n n CAF HAF KS1 sing 228 n n CAD HAD KS1 sing 229 n n CAB HAB KS1 sing 230 n n NAO HNAO KS1 sing 231 n n CAE HAE KS1 sing 232 n n # _atom_sites.entry_id 4QMW _atom_sites.fract_transf_matrix[1][1] 0.020937 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008041 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018071 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017785 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KS1 A 1 401 1 KS1 KS1 . C 3 EDO A 1 402 1 EDO EDO . D 4 ACT A 1 403 1 ACT ACT . E 5 HOH A 1 501 1 HOH HOH . E 5 HOH A 2 502 2 HOH HOH . E 5 HOH A 3 503 3 HOH HOH . E 5 HOH A 4 504 4 HOH HOH . E 5 HOH A 5 505 5 HOH HOH . E 5 HOH A 6 506 6 HOH HOH . E 5 HOH A 7 507 7 HOH HOH . E 5 HOH A 8 508 8 HOH HOH . E 5 HOH A 9 509 9 HOH HOH . E 5 HOH A 10 510 10 HOH HOH . E 5 HOH A 11 511 11 HOH HOH . E 5 HOH A 12 512 12 HOH HOH . E 5 HOH A 13 513 13 HOH HOH . E 5 HOH A 14 514 14 HOH HOH . E 5 HOH A 15 515 15 HOH HOH . E 5 HOH A 16 516 16 HOH HOH . E 5 HOH A 17 517 17 HOH HOH . E 5 HOH A 18 518 18 HOH HOH . E 5 HOH A 19 519 19 HOH HOH . E 5 HOH A 20 520 20 HOH HOH . E 5 HOH A 21 521 21 HOH HOH . E 5 HOH A 22 522 22 HOH HOH . E 5 HOH A 23 523 23 HOH HOH . E 5 HOH A 24 524 24 HOH HOH . E 5 HOH A 25 525 25 HOH HOH . E 5 HOH A 26 526 26 HOH HOH . E 5 HOH A 27 527 27 HOH HOH . E 5 HOH A 28 528 28 HOH HOH . E 5 HOH A 29 529 29 HOH HOH . E 5 HOH A 30 530 30 HOH HOH . E 5 HOH A 31 531 31 HOH HOH . E 5 HOH A 32 532 32 HOH HOH . E 5 HOH A 33 533 33 HOH HOH . E 5 HOH A 34 534 34 HOH HOH . E 5 HOH A 35 535 35 HOH HOH . E 5 HOH A 36 536 36 HOH HOH . E 5 HOH A 37 537 37 HOH HOH . E 5 HOH A 38 538 38 HOH HOH . E 5 HOH A 39 539 39 HOH HOH . E 5 HOH A 40 540 40 HOH HOH . E 5 HOH A 41 541 41 HOH HOH . E 5 HOH A 42 542 42 HOH HOH . E 5 HOH A 43 543 43 HOH HOH . E 5 HOH A 44 544 44 HOH HOH . E 5 HOH A 45 545 45 HOH HOH . E 5 HOH A 46 546 46 HOH HOH . E 5 HOH A 47 547 47 HOH HOH . E 5 HOH A 48 548 48 HOH HOH . E 5 HOH A 49 549 49 HOH HOH . E 5 HOH A 50 550 50 HOH HOH . E 5 HOH A 51 551 51 HOH HOH . E 5 HOH A 52 552 52 HOH HOH . E 5 HOH A 53 553 53 HOH HOH . E 5 HOH A 54 554 54 HOH HOH . E 5 HOH A 55 555 55 HOH HOH . E 5 HOH A 56 556 56 HOH HOH . E 5 HOH A 57 557 57 HOH HOH . E 5 HOH A 58 558 58 HOH HOH . E 5 HOH A 59 559 59 HOH HOH . E 5 HOH A 60 560 60 HOH HOH . E 5 HOH A 61 561 61 HOH HOH . E 5 HOH A 62 562 62 HOH HOH . E 5 HOH A 63 563 63 HOH HOH . E 5 HOH A 64 564 64 HOH HOH . E 5 HOH A 65 565 65 HOH HOH . E 5 HOH A 66 566 66 HOH HOH . E 5 HOH A 67 567 67 HOH HOH . E 5 HOH A 68 568 68 HOH HOH . E 5 HOH A 69 569 69 HOH HOH . E 5 HOH A 70 570 70 HOH HOH . E 5 HOH A 71 571 71 HOH HOH . E 5 HOH A 72 572 72 HOH HOH . E 5 HOH A 73 573 73 HOH HOH . E 5 HOH A 74 574 74 HOH HOH . E 5 HOH A 75 575 75 HOH HOH . E 5 HOH A 76 576 76 HOH HOH . E 5 HOH A 77 577 77 HOH HOH . E 5 HOH A 78 578 78 HOH HOH . E 5 HOH A 79 579 79 HOH HOH . E 5 HOH A 80 580 80 HOH HOH . E 5 HOH A 81 581 81 HOH HOH . E 5 HOH A 82 582 82 HOH HOH . E 5 HOH A 83 583 83 HOH HOH . E 5 HOH A 84 584 84 HOH HOH . E 5 HOH A 85 585 85 HOH HOH . E 5 HOH A 86 586 86 HOH HOH . E 5 HOH A 87 587 87 HOH HOH . E 5 HOH A 88 588 88 HOH HOH . E 5 HOH A 89 589 89 HOH HOH . E 5 HOH A 90 590 90 HOH HOH . E 5 HOH A 91 591 91 HOH HOH . E 5 HOH A 92 592 92 HOH HOH . E 5 HOH A 93 593 93 HOH HOH . E 5 HOH A 94 594 94 HOH HOH . E 5 HOH A 95 595 95 HOH HOH . E 5 HOH A 96 596 96 HOH HOH . E 5 HOH A 97 597 97 HOH HOH . E 5 HOH A 98 598 98 HOH HOH . E 5 HOH A 99 599 99 HOH HOH . E 5 HOH A 100 600 100 HOH HOH . E 5 HOH A 101 601 101 HOH HOH . E 5 HOH A 102 602 102 HOH HOH . E 5 HOH A 103 603 103 HOH HOH . E 5 HOH A 104 604 104 HOH HOH . E 5 HOH A 105 605 105 HOH HOH . E 5 HOH A 106 606 106 HOH HOH . E 5 HOH A 107 607 107 HOH HOH . E 5 HOH A 108 608 108 HOH HOH . E 5 HOH A 109 609 109 HOH HOH . E 5 HOH A 110 610 110 HOH HOH . E 5 HOH A 111 611 111 HOH HOH . E 5 HOH A 112 612 112 HOH HOH . E 5 HOH A 113 613 113 HOH HOH . E 5 HOH A 114 614 114 HOH HOH . E 5 HOH A 115 615 115 HOH HOH . E 5 HOH A 116 616 116 HOH HOH . E 5 HOH A 117 617 117 HOH HOH . E 5 HOH A 118 618 118 HOH HOH . E 5 HOH A 119 619 119 HOH HOH . E 5 HOH A 120 620 120 HOH HOH . E 5 HOH A 121 621 121 HOH HOH . E 5 HOH A 122 622 122 HOH HOH . E 5 HOH A 123 623 123 HOH HOH . E 5 HOH A 124 624 124 HOH HOH . E 5 HOH A 125 625 125 HOH HOH . E 5 HOH A 126 626 126 HOH HOH . E 5 HOH A 127 627 127 HOH HOH . E 5 HOH A 128 628 128 HOH HOH . E 5 HOH A 129 629 129 HOH HOH . E 5 HOH A 130 630 130 HOH HOH . E 5 HOH A 131 631 131 HOH HOH . E 5 HOH A 132 632 132 HOH HOH . E 5 HOH A 133 633 133 HOH HOH . E 5 HOH A 134 634 134 HOH HOH . E 5 HOH A 135 635 135 HOH HOH . E 5 HOH A 136 636 136 HOH HOH . E 5 HOH A 137 637 137 HOH HOH . E 5 HOH A 138 638 138 HOH HOH . E 5 HOH A 139 639 139 HOH HOH . E 5 HOH A 140 640 140 HOH HOH . E 5 HOH A 141 641 141 HOH HOH . E 5 HOH A 142 642 142 HOH HOH . E 5 HOH A 143 643 143 HOH HOH . E 5 HOH A 144 644 144 HOH HOH . E 5 HOH A 145 645 145 HOH HOH . E 5 HOH A 146 646 146 HOH HOH . E 5 HOH A 147 647 147 HOH HOH . E 5 HOH A 148 648 148 HOH HOH . E 5 HOH A 149 649 149 HOH HOH . E 5 HOH A 150 650 150 HOH HOH . E 5 HOH A 151 651 151 HOH HOH . E 5 HOH A 152 652 152 HOH HOH . E 5 HOH A 153 653 153 HOH HOH . E 5 HOH A 154 654 154 HOH HOH . E 5 HOH A 155 655 155 HOH HOH . E 5 HOH A 156 656 156 HOH HOH . E 5 HOH A 157 657 157 HOH HOH . E 5 HOH A 158 658 158 HOH HOH . E 5 HOH A 159 659 159 HOH HOH . E 5 HOH A 160 660 161 HOH HOH . E 5 HOH A 161 661 162 HOH HOH . E 5 HOH A 162 662 163 HOH HOH . E 5 HOH A 163 663 164 HOH HOH . E 5 HOH A 164 664 165 HOH HOH . E 5 HOH A 165 665 166 HOH HOH . E 5 HOH A 166 666 167 HOH HOH . E 5 HOH A 167 667 168 HOH HOH . E 5 HOH A 168 668 169 HOH HOH . E 5 HOH A 169 669 170 HOH HOH . E 5 HOH A 170 670 172 HOH HOH . E 5 HOH A 171 671 173 HOH HOH . E 5 HOH A 172 672 174 HOH HOH . E 5 HOH A 173 673 175 HOH HOH . E 5 HOH A 174 674 176 HOH HOH . E 5 HOH A 175 675 177 HOH HOH . E 5 HOH A 176 676 178 HOH HOH . E 5 HOH A 177 677 179 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAI KS1 . . . B 2 -1.911 -2.512 15.992 1 24.59 ? CAI KS1 401 A 1 HETATM 2 C CAG KS1 . . . B 2 -2.041 -3.833 16.779 1 26.84 ? CAG KS1 401 A 1 HETATM 3 C CAH KS1 . . . B 2 -2.7 -3.475 18.131 1 23.82 ? CAH KS1 401 A 1 HETATM 4 C CAJ KS1 . . . B 2 -3.086 -1.978 18.061 1 27.25 ? CAJ KS1 401 A 1 HETATM 5 C CAW KS1 . . . B 2 -1.975 -1.475 17.125 1 21.72 ? CAW KS1 401 A 1 HETATM 6 N NAX KS1 . . . B 2 -1.787 -0.072 16.845 1 17.25 ? NAX KS1 401 A 1 HETATM 7 N NAN KS1 . . . B 2 -0.683 0.372 17.319 1 16.49 ? NAN KS1 401 A 1 HETATM 8 C C4 KS1 . . . B 2 -2.421 0.945 16.207 1 13.83 ? C4 KS1 401 A 1 HETATM 9 N N3 KS1 . . . B 2 -3.603 1.007 15.539 1 17.2 ? N3 KS1 401 A 1 HETATM 10 C C2 KS1 . . . B 2 -3.991 2.188 14.984 1 13.44 ? C2 KS1 401 A 1 HETATM 11 N N1 KS1 . . . B 2 -3.205 3.305 15.087 1 12.87 ? N1 KS1 401 A 1 HETATM 12 C C6 KS1 . . . B 2 -2.021 3.303 15.757 1 12.9 ? C6 KS1 401 A 1 HETATM 13 N NAA KS1 . . . B 2 -1.329 4.454 15.814 1 11.8 ? NAA KS1 401 A 1 HETATM 14 C C5 KS1 . . . B 2 -1.606 2.087 16.337 1 11.61 ? C5 KS1 401 A 1 HETATM 15 C CAR KS1 . . . B 2 -0.5 1.662 17.076 1 11.78 ? CAR KS1 401 A 1 HETATM 16 C CAP KS1 . . . B 2 0.694 2.239 17.535 1 13.37 ? CAP KS1 401 A 1 HETATM 17 C CAF KS1 . . . B 2 1.516 3.016 16.693 1 13.21 ? CAF KS1 401 A 1 HETATM 18 C CAS KS1 . . . B 2 2.718 3.499 17.236 1 13.26 ? CAS KS1 401 A 1 HETATM 19 C CAD KS1 . . . B 2 3.73 4.3 16.725 1 12.7 ? CAD KS1 401 A 1 HETATM 20 C CAB KS1 . . . B 2 4.658 4.435 17.756 1 14.88 ? CAB KS1 401 A 1 HETATM 21 N NAO KS1 . . . B 2 4.246 3.757 18.84 1 15.45 ? NAO KS1 401 A 1 HETATM 22 C CAT KS1 . . . B 2 3.068 3.183 18.556 1 13.45 ? CAT KS1 401 A 1 HETATM 23 N NAM KS1 . . . B 2 2.287 2.411 19.333 1 14.68 ? NAM KS1 401 A 1 HETATM 24 C CAE KS1 . . . B 2 1.112 1.929 18.853 1 13.58 ? CAE KS1 401 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 24 #