data_4QND # _model_server_result.job_id BWjwNLp-RzbmofqzIeq60Q _model_server_result.datetime_utc '2025-02-17 01:54:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qnd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":106}' # _entry.id 4QND # _exptl.entry_id 4QND _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.489 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QND _cell.length_a 58.236 _cell.length_b 58.236 _cell.length_c 172.923 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QND _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1,2 A,B,C,D,E,F,G,H 2 1,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 58.236 58.236 0 3 'crystal symmetry operation' 5_555 -x+1/2,y,-z+3/4 -1 0 0 0 1 0 0 0 -1 29.118 0 129.69225 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H38 O9' _chem_comp.formula_weight 398.489 _chem_comp.id PE5 _chem_comp.mon_nstd_flag . _chem_comp.name 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-(2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL;POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C48 C50 PE5 sing 332 n n C48 H481 PE5 sing 333 n n C48 H482 PE5 sing 334 n n C48 H483 PE5 sing 335 n n C50 O1 PE5 sing 336 n n C50 H501 PE5 sing 337 n n C50 H502 PE5 sing 338 n n O1 C1 PE5 sing 339 n n C1 C2 PE5 sing 340 n n C1 H11 PE5 sing 341 n n C1 H12 PE5 sing 342 n n C2 O2 PE5 sing 343 n n C2 H21 PE5 sing 344 n n C2 H22 PE5 sing 345 n n O2 C3 PE5 sing 346 n n C3 C4 PE5 sing 347 n n C3 H31 PE5 sing 348 n n C3 H32 PE5 sing 349 n n C4 O3 PE5 sing 350 n n C4 H41 PE5 sing 351 n n C4 H42 PE5 sing 352 n n O3 C5 PE5 sing 353 n n C5 C6 PE5 sing 354 n n C5 H51 PE5 sing 355 n n C5 H52A PE5 sing 356 n n C6 O4 PE5 sing 357 n n C6 H61 PE5 sing 358 n n C6 H62 PE5 sing 359 n n O4 C7 PE5 sing 360 n n C7 C8 PE5 sing 361 n n C7 H71 PE5 sing 362 n n C7 H72 PE5 sing 363 n n C8 O5 PE5 sing 364 n n C8 H81 PE5 sing 365 n n C8 H82 PE5 sing 366 n n O5 C9 PE5 sing 367 n n C9 C10 PE5 sing 368 n n C9 H91 PE5 sing 369 n n C9 H92 PE5 sing 370 n n C10 O6 PE5 sing 371 n n C10 H101 PE5 sing 372 n n C10 H102 PE5 sing 373 n n O6 C11 PE5 sing 374 n n C11 C12 PE5 sing 375 n n C11 H111 PE5 sing 376 n n C11 H112 PE5 sing 377 n n C12 O7 PE5 sing 378 n n C12 H121 PE5 sing 379 n n C12 H122 PE5 sing 380 n n O7 C13 PE5 sing 381 n n C13 C14 PE5 sing 382 n n C13 H131 PE5 sing 383 n n C13 H132 PE5 sing 384 n n C14 O8 PE5 sing 385 n n C14 H141 PE5 sing 386 n n C14 H142 PE5 sing 387 n n O8 C15 PE5 sing 388 n n C15 C16 PE5 sing 389 n n C15 H151 PE5 sing 390 n n C15 H152 PE5 sing 391 n n C16 O52 PE5 sing 392 n n C16 H161 PE5 sing 393 n n C16 H162 PE5 sing 394 n n O52 H52 PE5 sing 395 n n # _atom_sites.entry_id 4QND _atom_sites.fract_transf_matrix[1][1] 0.017172 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005783 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYS A 1 101 714 MYS MYS . C 2 MYS A 1 102 715 MYS MYS . D 3 OLC A 1 103 710 OLC OLC . E 3 OLC A 1 104 711 OLC OLC . F 3 OLC A 1 105 712 OLC OLC . G 4 PE5 A 1 106 302 PE5 PE5 . H 5 HOH A 1 201 1 HOH HOH . H 5 HOH A 2 202 2 HOH HOH . H 5 HOH A 3 203 3 HOH HOH . H 5 HOH A 4 204 4 HOH HOH . H 5 HOH A 5 205 5 HOH HOH . H 5 HOH A 6 206 6 HOH HOH . H 5 HOH A 7 207 7 HOH HOH . H 5 HOH A 8 208 8 HOH HOH . H 5 HOH A 9 209 9 HOH HOH . H 5 HOH A 10 210 10 HOH HOH . H 5 HOH A 11 211 11 HOH HOH . H 5 HOH A 12 212 12 HOH HOH . H 5 HOH A 13 213 13 HOH HOH . H 5 HOH A 14 214 14 HOH HOH . H 5 HOH A 15 215 15 HOH HOH . H 5 HOH A 16 216 16 HOH HOH . H 5 HOH A 17 217 17 HOH HOH . H 5 HOH A 18 218 18 HOH HOH . H 5 HOH A 19 219 19 HOH HOH . H 5 HOH A 20 220 20 HOH HOH . H 5 HOH A 21 221 21 HOH HOH . H 5 HOH A 22 222 22 HOH HOH . H 5 HOH A 23 223 23 HOH HOH . H 5 HOH A 24 224 24 HOH HOH . H 5 HOH A 25 225 25 HOH HOH . H 5 HOH A 26 226 26 HOH HOH . H 5 HOH A 27 227 28 HOH HOH . H 5 HOH A 28 228 29 HOH HOH . H 5 HOH A 29 229 30 HOH HOH . H 5 HOH A 30 230 31 HOH HOH . H 5 HOH A 31 231 32 HOH HOH . H 5 HOH A 32 232 33 HOH HOH . H 5 HOH A 33 233 35 HOH HOH . H 5 HOH A 34 234 36 HOH HOH . H 5 HOH A 35 235 37 HOH HOH . H 5 HOH A 36 236 38 HOH HOH . H 5 HOH A 37 237 39 HOH HOH . H 5 HOH A 38 238 40 HOH HOH . H 5 HOH A 39 239 41 HOH HOH . H 5 HOH A 40 240 43 HOH HOH . H 5 HOH A 41 241 44 HOH HOH . H 5 HOH A 42 242 45 HOH HOH . H 5 HOH A 43 243 46 HOH HOH . H 5 HOH A 44 244 49 HOH HOH . H 5 HOH A 45 245 50 HOH HOH . H 5 HOH A 46 246 51 HOH HOH . H 5 HOH A 47 247 52 HOH HOH . H 5 HOH A 48 248 53 HOH HOH . H 5 HOH A 49 249 55 HOH HOH . H 5 HOH A 50 250 56 HOH HOH . H 5 HOH A 51 251 58 HOH HOH . H 5 HOH A 52 252 59 HOH HOH . H 5 HOH A 53 253 60 HOH HOH . H 5 HOH A 54 254 62 HOH HOH . H 5 HOH A 55 255 63 HOH HOH . H 5 HOH A 56 256 64 HOH HOH . H 5 HOH A 57 257 66 HOH HOH . H 5 HOH A 58 258 67 HOH HOH . H 5 HOH A 59 259 68 HOH HOH . H 5 HOH A 60 260 69 HOH HOH . H 5 HOH A 61 261 70 HOH HOH . H 5 HOH A 62 262 71 HOH HOH . H 5 HOH A 63 263 72 HOH HOH . H 5 HOH A 64 264 74 HOH HOH . H 5 HOH A 65 265 76 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C50 PE5 . . . G 4 27.467 30.068 76.441 1 64.42 ? C50 PE5 106 A 1 HETATM 2 O O1 PE5 . . . G 4 26.689 28.907 76.31 1 62.54 ? O1 PE5 106 A 1 HETATM 3 C C1 PE5 . . . G 4 27.27 27.937 75.438 1 54.54 ? C1 PE5 106 A 1 HETATM 4 C C2 PE5 . . . G 4 27.27 28.508 74.021 1 53.99 ? C2 PE5 106 A 1 HETATM 5 O O2 PE5 . . . G 4 28.257 27.811 73.245 1 58.28 ? O2 PE5 106 A 1 HETATM 6 C C3 PE5 . . . G 4 27.987 27.818 71.787 1 50.94 ? C3 PE5 106 A 1 HETATM 7 C C4 PE5 . . . G 4 28.951 26.797 71.142 1 52.95 ? C4 PE5 106 A 1 HETATM 8 O O3 PE5 . . . G 4 28.629 26.704 69.744 1 44.95 ? O3 PE5 106 A 1 HETATM 9 C C5 PE5 . . . G 4 27.996 25.488 69.389 1 42.28 ? C5 PE5 106 A 1 HETATM 10 C C6 PE5 . . . G 4 27.874 25.448 67.884 1 37.34 ? C6 PE5 106 A 1 HETATM 11 O O4 PE5 . . . G 4 28.626 26.548 67.359 1 32.52 ? O4 PE5 106 A 1 HETATM 12 C C7 PE5 . . . G 4 28.505 26.695 65.974 1 37.19 ? C7 PE5 106 A 1 HETATM 13 C C8 PE5 . . . G 4 29.699 27.527 65.466 1 38.65 ? C8 PE5 106 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #