data_4QOJ # _model_server_result.job_id eoh-o3eeTgLzt1zbSJObag _model_server_result.datetime_utc '2024-11-13 01:23:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qoj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":302}' # _entry.id 4QOJ # _exptl.entry_id 4QOJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.243 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description RESVERATROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QOJ _cell.length_a 56.96 _cell.length_b 83.91 _cell.length_c 106.19 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QOJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 174 A HIS 173 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2 ? metalc ? metalc2 A ND1 HIS 178 A HIS 177 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc3 A O CYS 223 A CYS 222 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc4 A SG CYS 223 A CYS 222 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc5 B ND1 HIS 174 B HIS 173 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc6 B ND1 HIS 178 B HIS 177 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc7 B O CYS 223 B CYS 222 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc8 B SG CYS 223 B CYS 222 1_555 H ZN ZN . B ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? # _chem_comp.formula 'C14 H12 O3' _chem_comp.formula_weight 228.243 _chem_comp.id STL _chem_comp.mon_nstd_flag . _chem_comp.name RESVERATROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 STL doub 344 n y C1 C6 STL sing 345 n y C1 O3 STL sing 346 n n C2 C3 STL sing 347 n y C2 H2 STL sing 348 n n C3 C4 STL doub 349 n y C3 O2 STL sing 350 n n C4 C5 STL sing 351 n y C4 H4 STL sing 352 n n C5 C6 STL doub 353 n y C5 C7 STL sing 354 n n C6 H6 STL sing 355 n n C7 C8 STL doub 356 e n C7 H7 STL sing 357 n n C8 C9 STL sing 358 n n C8 H8 STL sing 359 n n C9 C10 STL doub 360 n y C9 C14 STL sing 361 n y C10 C11 STL sing 362 n y C10 H10 STL sing 363 n n C11 C12 STL doub 364 n y C11 H11 STL sing 365 n n C12 C13 STL sing 366 n y C12 O1 STL sing 367 n n C13 C14 STL doub 368 n y C13 H13 STL sing 369 n n C14 H14 STL sing 370 n n O1 HO1 STL sing 371 n n O2 HO2 STL sing 372 n n O3 HO3 STL sing 373 n n # _atom_sites.entry_id 4QOJ _atom_sites.fract_transf_matrix[1][1] 0.017556 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011918 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009417 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 301 2 FMN FMN . D 3 STL A 1 302 1 STL STL . E 4 ZN A 1 303 1 ZN ZN . F 2 FMN B 1 301 1 FMN FMN . G 3 STL B 1 302 2 STL STL . H 4 ZN B 1 303 2 ZN ZN . I 5 HOH A 1 401 2 HOH HOH . I 5 HOH A 2 402 5 HOH HOH . I 5 HOH A 3 403 30 HOH HOH . I 5 HOH A 4 404 37 HOH HOH . I 5 HOH A 5 405 39 HOH HOH . I 5 HOH A 6 406 40 HOH HOH . I 5 HOH A 7 407 44 HOH HOH . I 5 HOH A 8 408 49 HOH HOH . I 5 HOH A 9 409 53 HOH HOH . I 5 HOH A 10 410 58 HOH HOH . I 5 HOH A 11 411 60 HOH HOH . I 5 HOH A 12 412 66 HOH HOH . I 5 HOH A 13 413 74 HOH HOH . I 5 HOH A 14 414 77 HOH HOH . I 5 HOH A 15 415 84 HOH HOH . I 5 HOH A 16 416 85 HOH HOH . I 5 HOH A 17 417 86 HOH HOH . I 5 HOH A 18 418 87 HOH HOH . I 5 HOH A 19 419 88 HOH HOH . I 5 HOH A 20 420 89 HOH HOH . I 5 HOH A 21 421 90 HOH HOH . I 5 HOH A 22 422 91 HOH HOH . I 5 HOH A 23 423 92 HOH HOH . I 5 HOH A 24 424 93 HOH HOH . I 5 HOH A 25 425 94 HOH HOH . I 5 HOH A 26 426 95 HOH HOH . I 5 HOH A 27 427 96 HOH HOH . I 5 HOH A 28 428 97 HOH HOH . I 5 HOH A 29 429 98 HOH HOH . I 5 HOH A 30 430 99 HOH HOH . I 5 HOH A 31 431 100 HOH HOH . I 5 HOH A 32 432 101 HOH HOH . I 5 HOH A 33 433 102 HOH HOH . I 5 HOH A 34 434 103 HOH HOH . I 5 HOH A 35 435 104 HOH HOH . I 5 HOH A 36 436 105 HOH HOH . I 5 HOH A 37 437 106 HOH HOH . I 5 HOH A 38 438 107 HOH HOH . I 5 HOH A 39 439 108 HOH HOH . I 5 HOH A 40 440 109 HOH HOH . I 5 HOH A 41 441 110 HOH HOH . I 5 HOH A 42 442 111 HOH HOH . I 5 HOH A 43 443 112 HOH HOH . I 5 HOH A 44 444 113 HOH HOH . I 5 HOH A 45 445 114 HOH HOH . I 5 HOH A 46 446 115 HOH HOH . I 5 HOH A 47 447 116 HOH HOH . I 5 HOH A 48 448 117 HOH HOH . I 5 HOH A 49 449 118 HOH HOH . I 5 HOH A 50 450 119 HOH HOH . I 5 HOH A 51 451 120 HOH HOH . I 5 HOH A 52 452 121 HOH HOH . I 5 HOH A 53 453 122 HOH HOH . I 5 HOH A 54 454 123 HOH HOH . I 5 HOH A 55 455 124 HOH HOH . I 5 HOH A 56 456 125 HOH HOH . I 5 HOH A 57 457 126 HOH HOH . I 5 HOH A 58 458 127 HOH HOH . I 5 HOH A 59 459 128 HOH HOH . I 5 HOH A 60 460 129 HOH HOH . I 5 HOH A 61 461 130 HOH HOH . I 5 HOH A 62 462 131 HOH HOH . I 5 HOH A 63 463 132 HOH HOH . I 5 HOH A 64 464 133 HOH HOH . I 5 HOH A 65 465 134 HOH HOH . I 5 HOH A 66 466 135 HOH HOH . I 5 HOH A 67 467 136 HOH HOH . I 5 HOH A 68 468 137 HOH HOH . I 5 HOH A 69 469 138 HOH HOH . I 5 HOH A 70 470 139 HOH HOH . I 5 HOH A 71 471 140 HOH HOH . I 5 HOH A 72 472 141 HOH HOH . I 5 HOH A 73 473 142 HOH HOH . I 5 HOH A 74 474 143 HOH HOH . I 5 HOH A 75 475 144 HOH HOH . I 5 HOH A 76 476 145 HOH HOH . I 5 HOH A 77 477 146 HOH HOH . I 5 HOH A 78 478 147 HOH HOH . I 5 HOH A 79 479 149 HOH HOH . I 5 HOH A 80 480 150 HOH HOH . I 5 HOH A 81 481 151 HOH HOH . I 5 HOH A 82 482 152 HOH HOH . I 5 HOH A 83 483 153 HOH HOH . I 5 HOH A 84 484 154 HOH HOH . I 5 HOH A 85 485 155 HOH HOH . I 5 HOH A 86 486 156 HOH HOH . I 5 HOH A 87 487 157 HOH HOH . I 5 HOH A 88 488 158 HOH HOH . I 5 HOH A 89 489 159 HOH HOH . I 5 HOH A 90 490 160 HOH HOH . I 5 HOH A 91 491 161 HOH HOH . I 5 HOH A 92 492 162 HOH HOH . I 5 HOH A 93 493 163 HOH HOH . I 5 HOH A 94 494 164 HOH HOH . I 5 HOH A 95 495 165 HOH HOH . I 5 HOH A 96 496 166 HOH HOH . I 5 HOH A 97 497 167 HOH HOH . I 5 HOH A 98 498 168 HOH HOH . I 5 HOH A 99 499 169 HOH HOH . I 5 HOH A 100 500 170 HOH HOH . I 5 HOH A 101 501 171 HOH HOH . I 5 HOH A 102 502 174 HOH HOH . I 5 HOH A 103 503 175 HOH HOH . I 5 HOH A 104 504 176 HOH HOH . I 5 HOH A 105 505 177 HOH HOH . I 5 HOH A 106 506 179 HOH HOH . I 5 HOH A 107 507 180 HOH HOH . J 5 HOH B 1 401 1 HOH HOH . J 5 HOH B 2 402 3 HOH HOH . J 5 HOH B 3 403 4 HOH HOH . J 5 HOH B 4 404 6 HOH HOH . J 5 HOH B 5 405 7 HOH HOH . J 5 HOH B 6 406 8 HOH HOH . J 5 HOH B 7 407 9 HOH HOH . J 5 HOH B 8 408 10 HOH HOH . J 5 HOH B 9 409 11 HOH HOH . J 5 HOH B 10 410 12 HOH HOH . J 5 HOH B 11 411 13 HOH HOH . J 5 HOH B 12 412 14 HOH HOH . J 5 HOH B 13 413 15 HOH HOH . J 5 HOH B 14 414 16 HOH HOH . J 5 HOH B 15 415 17 HOH HOH . J 5 HOH B 16 416 18 HOH HOH . J 5 HOH B 17 417 19 HOH HOH . J 5 HOH B 18 418 20 HOH HOH . J 5 HOH B 19 419 21 HOH HOH . J 5 HOH B 20 420 22 HOH HOH . J 5 HOH B 21 421 23 HOH HOH . J 5 HOH B 22 422 24 HOH HOH . J 5 HOH B 23 423 25 HOH HOH . J 5 HOH B 24 424 26 HOH HOH . J 5 HOH B 25 425 27 HOH HOH . J 5 HOH B 26 426 28 HOH HOH . J 5 HOH B 27 427 29 HOH HOH . J 5 HOH B 28 428 31 HOH HOH . J 5 HOH B 29 429 32 HOH HOH . J 5 HOH B 30 430 33 HOH HOH . J 5 HOH B 31 431 34 HOH HOH . J 5 HOH B 32 432 35 HOH HOH . J 5 HOH B 33 433 36 HOH HOH . J 5 HOH B 34 434 38 HOH HOH . J 5 HOH B 35 435 41 HOH HOH . J 5 HOH B 36 436 42 HOH HOH . J 5 HOH B 37 437 43 HOH HOH . J 5 HOH B 38 438 45 HOH HOH . J 5 HOH B 39 439 46 HOH HOH . J 5 HOH B 40 440 47 HOH HOH . J 5 HOH B 41 441 48 HOH HOH . J 5 HOH B 42 442 50 HOH HOH . J 5 HOH B 43 443 51 HOH HOH . J 5 HOH B 44 444 52 HOH HOH . J 5 HOH B 45 445 54 HOH HOH . J 5 HOH B 46 446 55 HOH HOH . J 5 HOH B 47 447 56 HOH HOH . J 5 HOH B 48 448 57 HOH HOH . J 5 HOH B 49 449 59 HOH HOH . J 5 HOH B 50 450 61 HOH HOH . J 5 HOH B 51 451 62 HOH HOH . J 5 HOH B 52 452 63 HOH HOH . J 5 HOH B 53 453 64 HOH HOH . J 5 HOH B 54 454 65 HOH HOH . J 5 HOH B 55 455 67 HOH HOH . J 5 HOH B 56 456 68 HOH HOH . J 5 HOH B 57 457 69 HOH HOH . J 5 HOH B 58 458 70 HOH HOH . J 5 HOH B 59 459 71 HOH HOH . J 5 HOH B 60 460 72 HOH HOH . J 5 HOH B 61 461 73 HOH HOH . J 5 HOH B 62 462 75 HOH HOH . J 5 HOH B 63 463 76 HOH HOH . J 5 HOH B 64 464 78 HOH HOH . J 5 HOH B 65 465 79 HOH HOH . J 5 HOH B 66 466 80 HOH HOH . J 5 HOH B 67 467 81 HOH HOH . J 5 HOH B 68 468 82 HOH HOH . J 5 HOH B 69 469 83 HOH HOH . J 5 HOH B 70 470 148 HOH HOH . J 5 HOH B 71 471 172 HOH HOH . J 5 HOH B 72 472 173 HOH HOH . J 5 HOH B 73 473 178 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 STL . . . G 3 21.932 18.677 14.801 1 22.25 ? C1 STL 302 B 1 HETATM 2 C C2 STL . . . G 3 20.757 18.944 14.112 1 19.77 ? C2 STL 302 B 1 HETATM 3 C C3 STL . . . G 3 20.186 17.942 13.334 1 20.77 ? C3 STL 302 B 1 HETATM 4 C C4 STL . . . G 3 20.777 16.696 13.24 1 20.37 ? C4 STL 302 B 1 HETATM 5 C C5 STL . . . G 3 21.97 16.423 13.915 1 21.54 ? C5 STL 302 B 1 HETATM 6 C C6 STL . . . G 3 22.537 17.427 14.709 1 20.98 ? C6 STL 302 B 1 HETATM 7 C C7 STL . . . G 3 22.583 15.111 13.675 1 23.59 ? C7 STL 302 B 1 HETATM 8 C C8 STL . . . G 3 23.675 14.568 14.18 1 25.96 ? C8 STL 302 B 1 HETATM 9 C C9 STL . . . G 3 24.21 13.237 13.858 1 23.12 ? C9 STL 302 B 1 HETATM 10 C C10 STL . . . G 3 25.377 12.808 14.488 1 25.49 ? C10 STL 302 B 1 HETATM 11 C C11 STL . . . G 3 25.896 11.546 14.26 1 24.2 ? C11 STL 302 B 1 HETATM 12 C C12 STL . . . G 3 25.267 10.689 13.372 1 24.92 ? C12 STL 302 B 1 HETATM 13 C C13 STL . . . G 3 24.126 11.106 12.704 1 22.73 ? C13 STL 302 B 1 HETATM 14 C C14 STL . . . G 3 23.597 12.359 12.961 1 22.65 ? C14 STL 302 B 1 HETATM 15 O O1 STL . . . G 3 25.738 9.419 13.218 1 22.53 ? O1 STL 302 B 1 HETATM 16 O O2 STL . . . G 3 19.081 18.145 12.565 1 24.96 ? O2 STL 302 B 1 HETATM 17 O O3 STL . . . G 3 22.492 19.662 15.57 1 24.45 ? O3 STL 302 B 1 HETATM 18 H H2 STL . . . G 3 20.285 19.916 14.214 1 19.46 ? H2 STL 302 B 1 HETATM 19 H H4 STL . . . G 3 20.293 15.93 12.638 1 21.3 ? H4 STL 302 B 1 HETATM 20 H H6 STL . . . G 3 23.455 17.215 15.254 1 20.91 ? H6 STL 302 B 1 HETATM 21 H H7 STL . . . G 3 22.005 14.527 12.962 1 22.81 ? H7 STL 302 B 1 HETATM 22 H H8 STL . . . G 3 24.267 15.116 14.912 1 26.05 ? H8 STL 302 B 1 HETATM 23 H H10 STL . . . G 3 25.901 13.466 15.18 1 24.86 ? H10 STL 302 B 1 HETATM 24 H H11 STL . . . G 3 26.791 11.226 14.793 1 23.99 ? H11 STL 302 B 1 HETATM 25 H H13 STL . . . G 3 23.639 10.471 11.966 1 21.66 ? H13 STL 302 B 1 HETATM 26 H H14 STL . . . G 3 22.665 12.627 12.47 1 21.31 ? H14 STL 302 B 1 HETATM 27 H HO1 STL . . . G 3 26.61 9.457 12.744 1 22.49 ? HO1 STL 302 B 1 HETATM 28 H HO2 STL . . . G 3 18.801 19.096 12.619 1 25.47 ? HO2 STL 302 B 1 HETATM 29 H HO3 STL . . . G 3 22.346 20.541 15.131 1 23.9 ? HO3 STL 302 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 29 #