data_4QP1
#
_model_server_result.job_id            4J6N9iXAm5xkte6yzC1qMw 
_model_server_result.datetime_utc      '2024-11-25 15:52:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          4qp1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    4QP1 
#
_exptl.entry_id    4QP1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              225.249 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-BENZYL-9H-PURIN-6-AMINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            4QP1 
_cell.length_a            82.808 
_cell.length_b            82.808 
_cell.length_c            274.595 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 4QP1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C NEP 134 A NEP 125 1_555 A N ILE 135 A ILE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 B C NEP 134 B NEP 125 1_555 B N ILE 135 B ILE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
#
_chem_comp.formula           'C12 H11 N5' 
_chem_comp.formula_weight    225.249 
_chem_comp.id                EMU 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-BENZYL-9H-PURIN-6-AMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     BENZYLAMINOPURINE 
#
_atom_sites.entry_id                     4QP1 
_atom_sites.fract_transf_matrix[1][1]    0.012076 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012076 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003642 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EMU A 1 401 1 EMU LIG . 
D 3 IMD A 1 402 1 IMD IMD . 
E 2 EMU B 1 401 1 EMU LIG . 
F 3 IMD B 1 402 1 IMD IMD . 
G 4 HOH A 1 501 1 HOH HOH . 
G 4 HOH A 2 502 2 HOH HOH . 
G 4 HOH A 3 503 3 HOH HOH . 
G 4 HOH A 4 504 4 HOH HOH . 
G 4 HOH A 5 505 6 HOH HOH . 
G 4 HOH A 6 506 7 HOH HOH . 
G 4 HOH A 7 507 9 HOH HOH . 
G 4 HOH A 8 508 10 HOH HOH . 
G 4 HOH A 9 509 11 HOH HOH . 
G 4 HOH A 10 510 12 HOH HOH . 
G 4 HOH A 11 511 13 HOH HOH . 
G 4 HOH A 12 512 14 HOH HOH . 
G 4 HOH A 13 513 15 HOH HOH . 
G 4 HOH A 14 514 16 HOH HOH . 
G 4 HOH A 15 515 17 HOH HOH . 
G 4 HOH A 16 516 18 HOH HOH . 
G 4 HOH A 17 517 19 HOH HOH . 
G 4 HOH A 18 518 20 HOH HOH . 
G 4 HOH A 19 519 21 HOH HOH . 
G 4 HOH A 20 520 22 HOH HOH . 
G 4 HOH A 21 521 24 HOH HOH . 
G 4 HOH A 22 522 25 HOH HOH . 
G 4 HOH A 23 523 41 HOH HOH . 
G 4 HOH A 24 524 42 HOH HOH . 
G 4 HOH A 25 525 44 HOH HOH . 
G 4 HOH A 26 526 45 HOH HOH . 
G 4 HOH A 27 527 48 HOH HOH . 
G 4 HOH A 28 528 49 HOH HOH . 
G 4 HOH A 29 529 51 HOH HOH . 
G 4 HOH A 30 530 59 HOH HOH . 
G 4 HOH A 31 531 73 HOH HOH . 
G 4 HOH A 32 532 88 HOH HOH . 
G 4 HOH A 33 533 93 HOH HOH . 
G 4 HOH A 34 534 95 HOH HOH . 
G 4 HOH A 35 535 96 HOH HOH . 
G 4 HOH A 36 536 97 HOH HOH . 
G 4 HOH A 37 537 98 HOH HOH . 
G 4 HOH A 38 538 102 HOH HOH . 
G 4 HOH A 39 539 103 HOH HOH . 
G 4 HOH A 40 540 109 HOH HOH . 
G 4 HOH A 41 541 110 HOH HOH . 
G 4 HOH A 42 542 112 HOH HOH . 
G 4 HOH A 43 543 114 HOH HOH . 
G 4 HOH A 44 544 118 HOH HOH . 
G 4 HOH A 45 545 120 HOH HOH . 
G 4 HOH A 46 546 121 HOH HOH . 
G 4 HOH A 47 547 122 HOH HOH . 
G 4 HOH A 48 548 123 HOH HOH . 
G 4 HOH A 49 549 124 HOH HOH . 
G 4 HOH A 50 550 125 HOH HOH . 
G 4 HOH A 51 551 126 HOH HOH . 
G 4 HOH A 52 552 131 HOH HOH . 
G 4 HOH A 53 553 134 HOH HOH . 
G 4 HOH A 54 554 136 HOH HOH . 
G 4 HOH A 55 555 137 HOH HOH . 
G 4 HOH A 56 556 138 HOH HOH . 
G 4 HOH A 57 557 141 HOH HOH . 
G 4 HOH A 58 558 147 HOH HOH . 
G 4 HOH A 59 559 148 HOH HOH . 
G 4 HOH A 60 560 151 HOH HOH . 
G 4 HOH A 61 561 158 HOH HOH . 
G 4 HOH A 62 562 165 HOH HOH . 
G 4 HOH A 63 563 166 HOH HOH . 
G 4 HOH A 64 564 167 HOH HOH . 
G 4 HOH A 65 565 172 HOH HOH . 
G 4 HOH A 66 566 176 HOH HOH . 
G 4 HOH A 67 567 177 HOH HOH . 
G 4 HOH A 68 568 197 HOH HOH . 
G 4 HOH A 69 569 198 HOH HOH . 
G 4 HOH A 70 570 202 HOH HOH . 
G 4 HOH A 71 571 203 HOH HOH . 
G 4 HOH A 72 572 205 HOH HOH . 
G 4 HOH A 73 573 206 HOH HOH . 
G 4 HOH A 74 574 207 HOH HOH . 
G 4 HOH A 75 575 208 HOH HOH . 
G 4 HOH A 76 576 209 HOH HOH . 
G 4 HOH A 77 577 211 HOH HOH . 
G 4 HOH A 78 578 217 HOH HOH . 
G 4 HOH A 79 579 221 HOH HOH . 
G 4 HOH A 80 580 224 HOH HOH . 
G 4 HOH A 81 581 249 HOH HOH . 
G 4 HOH A 82 582 256 HOH HOH . 
G 4 HOH A 83 583 259 HOH HOH . 
G 4 HOH A 84 584 262 HOH HOH . 
G 4 HOH A 85 585 270 HOH HOH . 
G 4 HOH A 86 586 282 HOH HOH . 
G 4 HOH A 87 587 303 HOH HOH . 
G 4 HOH A 88 588 304 HOH HOH . 
G 4 HOH A 89 589 312 HOH HOH . 
G 4 HOH A 90 590 318 HOH HOH . 
G 4 HOH A 91 591 320 HOH HOH . 
G 4 HOH A 92 592 321 HOH HOH . 
G 4 HOH A 93 593 322 HOH HOH . 
G 4 HOH A 94 594 325 HOH HOH . 
G 4 HOH A 95 595 331 HOH HOH . 
G 4 HOH A 96 596 340 HOH HOH . 
G 4 HOH A 97 597 345 HOH HOH . 
G 4 HOH A 98 598 350 HOH HOH . 
H 4 HOH B 1 501 27 HOH HOH . 
H 4 HOH B 2 502 28 HOH HOH . 
H 4 HOH B 3 503 29 HOH HOH . 
H 4 HOH B 4 504 30 HOH HOH . 
H 4 HOH B 5 505 32 HOH HOH . 
H 4 HOH B 6 506 33 HOH HOH . 
H 4 HOH B 7 507 34 HOH HOH . 
H 4 HOH B 8 508 35 HOH HOH . 
H 4 HOH B 9 509 36 HOH HOH . 
H 4 HOH B 10 510 37 HOH HOH . 
H 4 HOH B 11 511 38 HOH HOH . 
H 4 HOH B 12 512 39 HOH HOH . 
H 4 HOH B 13 513 40 HOH HOH . 
H 4 HOH B 14 514 43 HOH HOH . 
H 4 HOH B 15 515 46 HOH HOH . 
H 4 HOH B 16 516 50 HOH HOH . 
H 4 HOH B 17 517 53 HOH HOH . 
H 4 HOH B 18 518 54 HOH HOH . 
H 4 HOH B 19 519 55 HOH HOH . 
H 4 HOH B 20 520 58 HOH HOH . 
H 4 HOH B 21 521 62 HOH HOH . 
H 4 HOH B 22 522 63 HOH HOH . 
H 4 HOH B 23 523 67 HOH HOH . 
H 4 HOH B 24 524 69 HOH HOH . 
H 4 HOH B 25 525 71 HOH HOH . 
H 4 HOH B 26 526 74 HOH HOH . 
H 4 HOH B 27 527 83 HOH HOH . 
H 4 HOH B 28 528 85 HOH HOH . 
H 4 HOH B 29 529 101 HOH HOH . 
H 4 HOH B 30 530 104 HOH HOH . 
H 4 HOH B 31 531 105 HOH HOH . 
H 4 HOH B 32 532 106 HOH HOH . 
H 4 HOH B 33 533 107 HOH HOH . 
H 4 HOH B 34 534 108 HOH HOH . 
H 4 HOH B 35 535 115 HOH HOH . 
H 4 HOH B 36 536 116 HOH HOH . 
H 4 HOH B 37 537 119 HOH HOH . 
H 4 HOH B 38 538 128 HOH HOH . 
H 4 HOH B 39 539 132 HOH HOH . 
H 4 HOH B 40 540 135 HOH HOH . 
H 4 HOH B 41 541 139 HOH HOH . 
H 4 HOH B 42 542 140 HOH HOH . 
H 4 HOH B 43 543 142 HOH HOH . 
H 4 HOH B 44 544 144 HOH HOH . 
H 4 HOH B 45 545 146 HOH HOH . 
H 4 HOH B 46 546 149 HOH HOH . 
H 4 HOH B 47 547 150 HOH HOH . 
H 4 HOH B 48 548 153 HOH HOH . 
H 4 HOH B 49 549 154 HOH HOH . 
H 4 HOH B 50 550 157 HOH HOH . 
H 4 HOH B 51 551 161 HOH HOH . 
H 4 HOH B 52 552 168 HOH HOH . 
H 4 HOH B 53 553 173 HOH HOH . 
H 4 HOH B 54 554 174 HOH HOH . 
H 4 HOH B 55 555 180 HOH HOH . 
H 4 HOH B 56 556 191 HOH HOH . 
H 4 HOH B 57 557 196 HOH HOH . 
H 4 HOH B 58 558 199 HOH HOH . 
H 4 HOH B 59 559 201 HOH HOH . 
H 4 HOH B 60 560 210 HOH HOH . 
H 4 HOH B 61 561 214 HOH HOH . 
H 4 HOH B 62 562 215 HOH HOH . 
H 4 HOH B 63 563 225 HOH HOH . 
H 4 HOH B 64 564 233 HOH HOH . 
H 4 HOH B 65 565 234 HOH HOH . 
H 4 HOH B 66 566 236 HOH HOH . 
H 4 HOH B 67 567 246 HOH HOH . 
H 4 HOH B 68 568 248 HOH HOH . 
H 4 HOH B 69 569 250 HOH HOH . 
H 4 HOH B 70 570 251 HOH HOH . 
H 4 HOH B 71 571 252 HOH HOH . 
H 4 HOH B 72 572 255 HOH HOH . 
H 4 HOH B 73 573 266 HOH HOH . 
H 4 HOH B 74 574 272 HOH HOH . 
H 4 HOH B 75 575 277 HOH HOH . 
H 4 HOH B 76 576 280 HOH HOH . 
H 4 HOH B 77 577 286 HOH HOH . 
H 4 HOH B 78 578 288 HOH HOH . 
H 4 HOH B 79 579 296 HOH HOH . 
H 4 HOH B 80 580 297 HOH HOH . 
H 4 HOH B 81 581 299 HOH HOH . 
H 4 HOH B 82 582 319 HOH HOH . 
H 4 HOH B 83 583 324 HOH HOH . 
H 4 HOH B 84 584 330 HOH HOH . 
H 4 HOH B 85 585 336 HOH HOH . 
H 4 HOH B 86 586 337 HOH HOH . 
H 4 HOH B 87 587 343 HOH HOH . 
H 4 HOH B 88 588 349 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EMU . . . E 2 6.459 -52.883 -62.154 1 98.39 ? N1 EMU 401 B 1 
HETATM 2 C C2 EMU . . . E 2 6.571 -53.824 -63.076 1 97.51 ? C2 EMU 401 B 1 
HETATM 3 N N3 EMU . . . E 2 5.787 -54.877 -63.121 1 95.89 ? N3 EMU 401 B 1 
HETATM 4 C C4 EMU . . . E 2 4.825 -55.038 -62.208 1 94.69 ? C4 EMU 401 B 1 
HETATM 5 C C5 EMU . . . E 2 4.673 -54.063 -61.206 1 96.12 ? C5 EMU 401 B 1 
HETATM 6 C C6 EMU . . . E 2 5.533 -52.961 -61.2 1 99.07 ? C6 EMU 401 B 1 
HETATM 7 C C9 EMU . . . E 2 5.65 -50.554 -60.506 1 105.26 ? C9 EMU 401 B 1 
HETATM 8 N N7 EMU . . . E 2 3.623 -54.487 -60.421 1 95.08 ? N7 EMU 401 B 1 
HETATM 9 C C8 EMU . . . E 2 3.183 -55.653 -60.946 1 94.37 ? C8 EMU 401 B 1 
HETATM 10 N N9 EMU . . . E 2 3.889 -55.979 -61.991 1 94.07 ? N9 EMU 401 B 1 
HETATM 11 C C10 EMU . . . E 2 6.201 -49.8 -59.311 1 108.5 ? C10 EMU 401 B 1 
HETATM 12 C C11 EMU . . . E 2 7.569 -49.664 -59.182 1 110.64 ? C11 EMU 401 B 1 
HETATM 13 C C12 EMU . . . E 2 8.116 -48.975 -58.116 1 111.69 ? C12 EMU 401 B 1 
HETATM 14 C C13 EMU . . . E 2 7.288 -48.407 -57.165 1 111.86 ? C13 EMU 401 B 1 
HETATM 15 C C14 EMU . . . E 2 5.915 -48.533 -57.288 1 111.09 ? C14 EMU 401 B 1 
HETATM 16 C C15 EMU . . . E 2 5.372 -49.225 -58.359 1 109.68 ? C15 EMU 401 B 1 
HETATM 17 N N10 EMU . . . E 2 5.409 -51.977 -60.218 1 102.33 ? N10 EMU 401 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           17 
#