data_4QP3 # _model_server_result.job_id mb6t26ECwjcGpotll7pgLA _model_server_result.datetime_utc '2024-11-29 07:33:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qp3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 4QP3 # _exptl.entry_id 4QP3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 269.302 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2S)-3-phenyl-2-(9H-purin-6-ylamino)propan-1-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QP3 _cell.length_a 83.083 _cell.length_b 83.083 _cell.length_c 277.013 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QP3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 133 A ASP 124 1_555 A N NEP 134 A NEP 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C NEP 134 A NEP 125 1_555 A N ILE 135 A ILE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 B C ASP 133 B ASP 124 1_555 B N NEP 134 B NEP 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale4 B C NEP 134 B NEP 125 1_555 B N ILE 135 B ILE 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? # _chem_comp.formula 'C14 H15 N5 O' _chem_comp.formula_weight 269.302 _chem_comp.id 36Q _chem_comp.mon_nstd_flag . _chem_comp.name (2S)-3-phenyl-2-(9H-purin-6-ylamino)propan-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4QP3 _atom_sites.fract_transf_matrix[1][1] 0.012036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012036 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00361 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 36Q A 1 401 1 36Q LIG . D 2 36Q B 1 401 1 36Q LIG . E 3 HOH A 1 501 1 HOH HOH . E 3 HOH A 2 502 2 HOH HOH . E 3 HOH A 3 503 3 HOH HOH . E 3 HOH A 4 504 4 HOH HOH . E 3 HOH A 5 505 5 HOH HOH . E 3 HOH A 6 506 6 HOH HOH . E 3 HOH A 7 507 7 HOH HOH . E 3 HOH A 8 508 8 HOH HOH . E 3 HOH A 9 509 9 HOH HOH . E 3 HOH A 10 510 10 HOH HOH . E 3 HOH A 11 511 11 HOH HOH . E 3 HOH A 12 512 12 HOH HOH . E 3 HOH A 13 513 13 HOH HOH . E 3 HOH A 14 514 14 HOH HOH . E 3 HOH A 15 515 15 HOH HOH . E 3 HOH A 16 516 16 HOH HOH . E 3 HOH A 17 517 17 HOH HOH . E 3 HOH A 18 518 18 HOH HOH . E 3 HOH A 19 519 19 HOH HOH . E 3 HOH A 20 520 20 HOH HOH . E 3 HOH A 21 521 21 HOH HOH . E 3 HOH A 22 522 22 HOH HOH . E 3 HOH A 23 523 23 HOH HOH . E 3 HOH A 24 524 24 HOH HOH . E 3 HOH A 25 525 25 HOH HOH . E 3 HOH A 26 526 26 HOH HOH . E 3 HOH A 27 527 27 HOH HOH . E 3 HOH A 28 528 37 HOH HOH . E 3 HOH A 29 529 38 HOH HOH . E 3 HOH A 30 530 39 HOH HOH . E 3 HOH A 31 531 40 HOH HOH . E 3 HOH A 32 532 41 HOH HOH . E 3 HOH A 33 533 42 HOH HOH . E 3 HOH A 34 534 44 HOH HOH . E 3 HOH A 35 535 45 HOH HOH . E 3 HOH A 36 536 46 HOH HOH . E 3 HOH A 37 537 47 HOH HOH . E 3 HOH A 38 538 53 HOH HOH . E 3 HOH A 39 539 54 HOH HOH . E 3 HOH A 40 540 57 HOH HOH . E 3 HOH A 41 541 58 HOH HOH . E 3 HOH A 42 542 59 HOH HOH . E 3 HOH A 43 543 60 HOH HOH . E 3 HOH A 44 544 61 HOH HOH . E 3 HOH A 45 545 62 HOH HOH . E 3 HOH A 46 546 63 HOH HOH . E 3 HOH A 47 547 71 HOH HOH . E 3 HOH A 48 548 74 HOH HOH . E 3 HOH A 49 549 75 HOH HOH . E 3 HOH A 50 550 77 HOH HOH . E 3 HOH A 51 551 79 HOH HOH . E 3 HOH A 52 552 82 HOH HOH . E 3 HOH A 53 553 84 HOH HOH . E 3 HOH A 54 554 88 HOH HOH . E 3 HOH A 55 555 89 HOH HOH . E 3 HOH A 56 556 91 HOH HOH . E 3 HOH A 57 557 92 HOH HOH . E 3 HOH A 58 558 93 HOH HOH . E 3 HOH A 59 559 95 HOH HOH . E 3 HOH A 60 560 96 HOH HOH . E 3 HOH A 61 561 97 HOH HOH . E 3 HOH A 62 562 100 HOH HOH . E 3 HOH A 63 563 101 HOH HOH . E 3 HOH A 64 564 104 HOH HOH . E 3 HOH A 65 565 106 HOH HOH . E 3 HOH A 66 566 108 HOH HOH . E 3 HOH A 67 567 111 HOH HOH . E 3 HOH A 68 568 114 HOH HOH . E 3 HOH A 69 569 116 HOH HOH . E 3 HOH A 70 570 117 HOH HOH . E 3 HOH A 71 571 118 HOH HOH . E 3 HOH A 72 572 119 HOH HOH . E 3 HOH A 73 573 120 HOH HOH . E 3 HOH A 74 574 121 HOH HOH . E 3 HOH A 75 575 122 HOH HOH . E 3 HOH A 76 576 125 HOH HOH . E 3 HOH A 77 577 126 HOH HOH . E 3 HOH A 78 578 130 HOH HOH . E 3 HOH A 79 579 133 HOH HOH . E 3 HOH A 80 580 136 HOH HOH . E 3 HOH A 81 581 138 HOH HOH . E 3 HOH A 82 582 139 HOH HOH . E 3 HOH A 83 583 141 HOH HOH . E 3 HOH A 84 584 142 HOH HOH . E 3 HOH A 85 585 143 HOH HOH . E 3 HOH A 86 586 144 HOH HOH . E 3 HOH A 87 587 145 HOH HOH . E 3 HOH A 88 588 148 HOH HOH . E 3 HOH A 89 589 151 HOH HOH . E 3 HOH A 90 590 155 HOH HOH . E 3 HOH A 91 591 158 HOH HOH . E 3 HOH A 92 592 160 HOH HOH . E 3 HOH A 93 593 161 HOH HOH . E 3 HOH A 94 594 164 HOH HOH . E 3 HOH A 95 595 166 HOH HOH . F 3 HOH B 1 501 28 HOH HOH . F 3 HOH B 2 502 29 HOH HOH . F 3 HOH B 3 503 30 HOH HOH . F 3 HOH B 4 504 31 HOH HOH . F 3 HOH B 5 505 32 HOH HOH . F 3 HOH B 6 506 33 HOH HOH . F 3 HOH B 7 507 34 HOH HOH . F 3 HOH B 8 508 35 HOH HOH . F 3 HOH B 9 509 36 HOH HOH . F 3 HOH B 10 510 43 HOH HOH . F 3 HOH B 11 511 48 HOH HOH . F 3 HOH B 12 512 49 HOH HOH . F 3 HOH B 13 513 50 HOH HOH . F 3 HOH B 14 514 51 HOH HOH . F 3 HOH B 15 515 52 HOH HOH . F 3 HOH B 16 516 55 HOH HOH . F 3 HOH B 17 517 56 HOH HOH . F 3 HOH B 18 518 64 HOH HOH . F 3 HOH B 19 519 65 HOH HOH . F 3 HOH B 20 520 66 HOH HOH . F 3 HOH B 21 521 68 HOH HOH . F 3 HOH B 22 522 69 HOH HOH . F 3 HOH B 23 523 70 HOH HOH . F 3 HOH B 24 524 72 HOH HOH . F 3 HOH B 25 525 73 HOH HOH . F 3 HOH B 26 526 76 HOH HOH . F 3 HOH B 27 527 78 HOH HOH . F 3 HOH B 28 528 80 HOH HOH . F 3 HOH B 29 529 81 HOH HOH . F 3 HOH B 30 530 83 HOH HOH . F 3 HOH B 31 531 85 HOH HOH . F 3 HOH B 32 532 86 HOH HOH . F 3 HOH B 33 533 87 HOH HOH . F 3 HOH B 34 534 90 HOH HOH . F 3 HOH B 35 535 94 HOH HOH . F 3 HOH B 36 536 98 HOH HOH . F 3 HOH B 37 537 99 HOH HOH . F 3 HOH B 38 538 102 HOH HOH . F 3 HOH B 39 539 103 HOH HOH . F 3 HOH B 40 540 107 HOH HOH . F 3 HOH B 41 541 109 HOH HOH . F 3 HOH B 42 542 110 HOH HOH . F 3 HOH B 43 543 112 HOH HOH . F 3 HOH B 44 544 113 HOH HOH . F 3 HOH B 45 545 115 HOH HOH . F 3 HOH B 46 546 123 HOH HOH . F 3 HOH B 47 547 124 HOH HOH . F 3 HOH B 48 548 127 HOH HOH . F 3 HOH B 49 549 128 HOH HOH . F 3 HOH B 50 550 129 HOH HOH . F 3 HOH B 51 551 132 HOH HOH . F 3 HOH B 52 552 134 HOH HOH . F 3 HOH B 53 553 135 HOH HOH . F 3 HOH B 54 554 137 HOH HOH . F 3 HOH B 55 555 140 HOH HOH . F 3 HOH B 56 556 146 HOH HOH . F 3 HOH B 57 557 147 HOH HOH . F 3 HOH B 58 558 150 HOH HOH . F 3 HOH B 59 559 152 HOH HOH . F 3 HOH B 60 560 153 HOH HOH . F 3 HOH B 61 561 154 HOH HOH . F 3 HOH B 62 562 156 HOH HOH . F 3 HOH B 63 563 157 HOH HOH . F 3 HOH B 64 564 159 HOH HOH . F 3 HOH B 65 565 162 HOH HOH . F 3 HOH B 66 566 165 HOH HOH . F 3 HOH B 67 567 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 36Q . . . C 2 -17.394 -40.429 -30.447 1 69.37 ? C4 36Q 401 A 1 HETATM 2 C C5 36Q . . . C 2 -17.612 -41.642 -29.821 1 72.72 ? C5 36Q 401 A 1 HETATM 3 C C6 36Q . . . C 2 -18.87 -42.215 -29.857 1 74.55 ? C6 36Q 401 A 1 HETATM 4 C C7 36Q . . . C 2 -16.024 -39.802 -30.426 1 62.51 ? C7 36Q 401 A 1 HETATM 5 C C8 36Q . . . C 2 -15.693 -39.075 -29.127 1 54.28 ? C8 36Q 401 A 1 HETATM 6 C C10 36Q . . . C 2 -14.169 -38.952 -29.075 1 47.17 ? C10 36Q 401 A 1 HETATM 7 N N12 36Q . . . C 2 -16.299 -37.74 -29.15 1 53 ? N12 36Q 401 A 1 HETATM 8 C C13 36Q . . . C 2 -16.164 -36.877 -28.073 1 49.94 ? C13 36Q 401 A 1 HETATM 9 C C15 36Q . . . C 2 -16.35 -34.69 -27.068 1 45.45 ? C15 36Q 401 A 1 HETATM 10 C C21 36Q . . . C 2 -15.555 -36.488 -25.878 1 49.57 ? C21 36Q 401 A 1 HETATM 11 C C1 36Q . . . C 2 -19.901 -41.58 -30.527 1 74.23 ? C1 36Q 401 A 1 HETATM 12 C C2 36Q . . . C 2 -19.684 -40.369 -31.155 1 72.54 ? C2 36Q 401 A 1 HETATM 13 C C3 36Q . . . C 2 -18.427 -39.798 -31.117 1 71.28 ? C3 36Q 401 A 1 HETATM 14 O O11 36Q . . . C 2 -13.582 -40.17 -29.534 1 42.87 ? O11 36Q 401 A 1 HETATM 15 C C14 36Q . . . C 2 -16.515 -35.52 -28.192 1 46.54 ? C14 36Q 401 A 1 HETATM 16 N N16 36Q . . . C 2 -16.76 -33.439 -27.451 1 41.79 ? N16 36Q 401 A 1 HETATM 17 C C18 36Q . . . C 2 -17.152 -33.527 -28.754 1 42.01 ? C18 36Q 401 A 1 HETATM 18 N N19 36Q . . . C 2 -17.01 -34.745 -29.189 1 44.04 ? N19 36Q 401 A 1 HETATM 19 N N20 36Q . . . C 2 -15.873 -35.213 -25.946 1 49.01 ? N20 36Q 401 A 1 HETATM 20 N N22 36Q . . . C 2 -15.694 -37.305 -26.904 1 49.49 ? N22 36Q 401 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #