data_4QPJ # _model_server_result.job_id Tooz9aeE4_RzrDpGjNcPRg _model_server_result.datetime_utc '2025-03-04 08:34:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qpj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":201}' # _entry.id 4QPJ # _exptl.entry_id 4QPJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 4QPJ _cell.length_a 124.951 _cell.length_b 124.951 _cell.length_c 136.332 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QPJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 1 1 A,C,E,F,G,H,M,N,P,R 2 1 B,D,I,J,K,L,O,Q,S 2 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_655 y+1,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 124.951 0 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id O _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PHE 126 A PHE 92 1_555 H CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc2 A O GLU 129 A GLU 95 1_555 H CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.829 ? metalc ? metalc3 A O PRO 131 A PRO 97 1_555 H CA CA . A CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc4 A OD1 ASN 158 A ASN 124 1_555 G NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? metalc ? metalc5 A O ILE 161 A ILE 127 1_555 G NA NA . A NA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.087 ? metalc ? metalc6 G NA NA . A NA 303 1_555 P O HOH . A HOH 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.178 ? metalc ? metalc7 G NA NA . A NA 303 1_555 P O HOH . A HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? metalc ? metalc8 B O PHE 126 B PHE 92 1_555 L CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.857 ? metalc ? metalc9 B O GLU 129 B GLU 95 1_555 L CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.885 ? metalc ? metalc10 B O PRO 131 B PRO 97 1_555 L CA CA . B CA 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc11 D O ASP 43 D ASP 9 1_555 O MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.887 ? metalc ? metalc12 D OD2 ASP 85 D ASP 51 1_555 O MG MG . D MG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 4QPJ _atom_sites.fract_transf_matrix[1][1] 0.008003 _atom_sites.fract_transf_matrix[1][2] 0.004621 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009241 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007335 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GOL A 1 301 2 GOL GOL . F 3 GOL A 1 302 3 GOL GOL . G 4 NA A 1 303 1 NA NA . H 5 CA A 1 304 1 CA CA . I 3 GOL B 1 301 1 GOL GOL . J 3 GOL B 1 302 4 GOL GOL . K 6 CL B 1 303 1 CL CL . L 5 CA B 1 304 1 CA CA . M 3 GOL C 1 201 5 GOL GOL . N 5 CA C 1 202 2 CA CA . O 7 MG D 1 201 1 MG MG . P 8 HOH A 1 401 1 HOH HOH . P 8 HOH A 2 402 5 HOH HOH . P 8 HOH A 3 403 9 HOH HOH . P 8 HOH A 4 404 10 HOH HOH . P 8 HOH A 5 405 11 HOH HOH . P 8 HOH A 6 406 13 HOH HOH . P 8 HOH A 7 407 17 HOH HOH . P 8 HOH A 8 408 19 HOH HOH . P 8 HOH A 9 409 20 HOH HOH . P 8 HOH A 10 410 21 HOH HOH . P 8 HOH A 11 411 22 HOH HOH . P 8 HOH A 12 412 23 HOH HOH . P 8 HOH A 13 413 27 HOH HOH . Q 8 HOH B 1 401 3 HOH HOH . Q 8 HOH B 2 402 8 HOH HOH . Q 8 HOH B 3 403 24 HOH HOH . R 8 HOH C 1 301 6 HOH HOH . R 8 HOH C 2 302 12 HOH HOH . R 8 HOH C 3 303 14 HOH HOH . R 8 HOH C 4 304 15 HOH HOH . R 8 HOH C 5 305 16 HOH HOH . S 8 HOH D 1 301 4 HOH HOH . S 8 HOH D 2 302 18 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id O _atom_site.label_entity_id 7 _atom_site.Cartn_x 26.739 _atom_site.Cartn_y -49.233 _atom_site.Cartn_z 12.566 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 66.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 201 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #