data_4QPS # _model_server_result.job_id LJH57LwIWiBlWtGeN8u9pQ _model_server_result.datetime_utc '2025-01-02 16:33:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qps # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1201}' # _entry.id 4QPS # _exptl.entry_id 4QPS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.381 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{1-[6-(phenylamino)pyrazin-2-yl]-1H-benzimidazol-6-yl}prop-2-enamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.26 _cell.angle_gamma 90 _cell.entry_id 4QPS _cell.length_a 79.511 _cell.length_b 43.877 _cell.length_c 81.695 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QPS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 99 A CYS 909 1_555 C C1 37Q . A 37Q 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? covale ? covale2 B SG CYS 99 C CYS 909 1_555 D C1 37Q . C 37Q 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? # _chem_comp.formula 'C20 H16 N6 O' _chem_comp.formula_weight 356.381 _chem_comp.id 37Q _chem_comp.mon_nstd_flag . _chem_comp.name N-{1-[6-(phenylamino)pyrazin-2-yl]-1H-benzimidazol-6-yl}prop-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N21 C10 37Q doub 1 n y N21 C11 37Q sing 2 n y C10 C18 37Q sing 3 n y N24 C18 37Q sing 4 n n N24 C14 37Q sing 5 n n C11 C19 37Q doub 6 n y C18 N23 37Q doub 7 n y C5 C14 37Q doub 8 n y C5 C3 37Q sing 9 n y C14 C6 37Q sing 10 n y C19 N23 37Q sing 11 n y C19 N26 37Q sing 12 n n C3 C2 37Q doub 13 n y C6 C4 37Q doub 14 n y N26 C12 37Q sing 15 n y N26 C17 37Q sing 16 n y C12 N22 37Q doub 17 n y C2 C4 37Q sing 18 n y C17 C9 37Q doub 19 n y C17 C16 37Q sing 20 n y N22 C16 37Q sing 21 n y C9 C15 37Q sing 22 n y C16 C8 37Q doub 23 n y C15 N25 37Q sing 24 n n C15 C7 37Q doub 25 n y N25 C20 37Q sing 26 n n C8 C7 37Q sing 27 n y C20 C13 37Q sing 28 n n C20 O27 37Q doub 29 n n C13 C1 37Q doub 30 n n C4 H1 37Q sing 31 n n C5 H2 37Q sing 32 n n C6 H3 37Q sing 33 n n C7 H4 37Q sing 34 n n C8 H5 37Q sing 35 n n C10 H6 37Q sing 36 n n C13 H7 37Q sing 37 n n C1 H9 37Q sing 38 n n C1 H10 37Q sing 39 n n C2 H12 37Q sing 40 n n C3 H13 37Q sing 41 n n C9 H14 37Q sing 42 n n C11 H15 37Q sing 43 n n C12 H16 37Q sing 44 n n N24 H17 37Q sing 45 n n N25 H18 37Q sing 46 n n # _atom_sites.entry_id 4QPS _atom_sites.fract_transf_matrix[1][1] 0.012577 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005934 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022791 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013535 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 37Q A 1 1201 909 37Q CYS . D 2 37Q C 1 1201 909 37Q CYS . E 3 HOH A 1 1301 2 HOH HOH . E 3 HOH A 2 1302 3 HOH HOH . E 3 HOH A 3 1303 4 HOH HOH . E 3 HOH A 4 1304 6 HOH HOH . E 3 HOH A 5 1305 8 HOH HOH . E 3 HOH A 6 1306 11 HOH HOH . E 3 HOH A 7 1307 17 HOH HOH . E 3 HOH A 8 1308 18 HOH HOH . E 3 HOH A 9 1309 20 HOH HOH . E 3 HOH A 10 1310 22 HOH HOH . E 3 HOH A 11 1311 24 HOH HOH . E 3 HOH A 12 1312 31 HOH HOH . E 3 HOH A 13 1313 32 HOH HOH . E 3 HOH A 14 1314 34 HOH HOH . E 3 HOH A 15 1315 35 HOH HOH . E 3 HOH A 16 1316 38 HOH HOH . E 3 HOH A 17 1317 39 HOH HOH . E 3 HOH A 18 1318 40 HOH HOH . E 3 HOH A 19 1319 41 HOH HOH . E 3 HOH A 20 1320 44 HOH HOH . E 3 HOH A 21 1321 45 HOH HOH . E 3 HOH A 22 1322 48 HOH HOH . E 3 HOH A 23 1323 49 HOH HOH . E 3 HOH A 24 1324 51 HOH HOH . E 3 HOH A 25 1325 52 HOH HOH . E 3 HOH A 26 1326 53 HOH HOH . E 3 HOH A 27 1327 54 HOH HOH . E 3 HOH A 28 1328 55 HOH HOH . E 3 HOH A 29 1329 57 HOH HOH . E 3 HOH A 30 1330 60 HOH HOH . E 3 HOH A 31 1331 62 HOH HOH . E 3 HOH A 32 1332 64 HOH HOH . E 3 HOH A 33 1333 65 HOH HOH . E 3 HOH A 34 1334 68 HOH HOH . E 3 HOH A 35 1335 71 HOH HOH . E 3 HOH A 36 1336 76 HOH HOH . E 3 HOH A 37 1337 79 HOH HOH . E 3 HOH A 38 1338 81 HOH HOH . E 3 HOH A 39 1339 83 HOH HOH . E 3 HOH A 40 1340 85 HOH HOH . E 3 HOH A 41 1341 88 HOH HOH . E 3 HOH A 42 1342 91 HOH HOH . E 3 HOH A 43 1343 92 HOH HOH . E 3 HOH A 44 1344 93 HOH HOH . E 3 HOH A 45 1345 94 HOH HOH . E 3 HOH A 46 1346 95 HOH HOH . E 3 HOH A 47 1347 96 HOH HOH . E 3 HOH A 48 1348 98 HOH HOH . E 3 HOH A 49 1349 100 HOH HOH . E 3 HOH A 50 1350 103 HOH HOH . E 3 HOH A 51 1351 106 HOH HOH . E 3 HOH A 52 1352 108 HOH HOH . E 3 HOH A 53 1353 110 HOH HOH . E 3 HOH A 54 1354 115 HOH HOH . E 3 HOH A 55 1355 120 HOH HOH . E 3 HOH A 56 1356 123 HOH HOH . E 3 HOH A 57 1357 125 HOH HOH . E 3 HOH A 58 1358 126 HOH HOH . E 3 HOH A 59 1359 127 HOH HOH . E 3 HOH A 60 1360 129 HOH HOH . E 3 HOH A 61 1361 131 HOH HOH . E 3 HOH A 62 1362 133 HOH HOH . E 3 HOH A 63 1363 135 HOH HOH . E 3 HOH A 64 1364 138 HOH HOH . E 3 HOH A 65 1365 140 HOH HOH . E 3 HOH A 66 1366 142 HOH HOH . E 3 HOH A 67 1367 143 HOH HOH . E 3 HOH A 68 1368 149 HOH HOH . E 3 HOH A 69 1369 151 HOH HOH . E 3 HOH A 70 1370 155 HOH HOH . E 3 HOH A 71 1371 158 HOH HOH . E 3 HOH A 72 1372 160 HOH HOH . E 3 HOH A 73 1373 161 HOH HOH . E 3 HOH A 74 1374 162 HOH HOH . E 3 HOH A 75 1375 163 HOH HOH . E 3 HOH A 76 1376 164 HOH HOH . E 3 HOH A 77 1377 165 HOH HOH . E 3 HOH A 78 1378 167 HOH HOH . E 3 HOH A 79 1379 168 HOH HOH . E 3 HOH A 80 1380 171 HOH HOH . E 3 HOH A 81 1381 173 HOH HOH . E 3 HOH A 82 1382 174 HOH HOH . E 3 HOH A 83 1383 177 HOH HOH . E 3 HOH A 84 1384 178 HOH HOH . E 3 HOH A 85 1385 179 HOH HOH . E 3 HOH A 86 1386 180 HOH HOH . E 3 HOH A 87 1387 181 HOH HOH . E 3 HOH A 88 1388 188 HOH HOH . E 3 HOH A 89 1389 190 HOH HOH . E 3 HOH A 90 1390 194 HOH HOH . E 3 HOH A 91 1391 199 HOH HOH . E 3 HOH A 92 1392 203 HOH HOH . E 3 HOH A 93 1393 206 HOH HOH . E 3 HOH A 94 1394 208 HOH HOH . E 3 HOH A 95 1395 209 HOH HOH . E 3 HOH A 96 1396 210 HOH HOH . E 3 HOH A 97 1397 211 HOH HOH . E 3 HOH A 98 1398 217 HOH HOH . E 3 HOH A 99 1399 219 HOH HOH . F 3 HOH C 1 1301 1 HOH HOH . F 3 HOH C 2 1302 5 HOH HOH . F 3 HOH C 3 1303 7 HOH HOH . F 3 HOH C 4 1304 9 HOH HOH . F 3 HOH C 5 1305 10 HOH HOH . F 3 HOH C 6 1306 12 HOH HOH . F 3 HOH C 7 1307 13 HOH HOH . F 3 HOH C 8 1308 14 HOH HOH . F 3 HOH C 9 1309 15 HOH HOH . F 3 HOH C 10 1310 16 HOH HOH . F 3 HOH C 11 1311 19 HOH HOH . F 3 HOH C 12 1312 21 HOH HOH . F 3 HOH C 13 1313 23 HOH HOH . F 3 HOH C 14 1314 25 HOH HOH . F 3 HOH C 15 1315 26 HOH HOH . F 3 HOH C 16 1316 27 HOH HOH . F 3 HOH C 17 1317 28 HOH HOH . F 3 HOH C 18 1318 29 HOH HOH . F 3 HOH C 19 1319 30 HOH HOH . F 3 HOH C 20 1320 36 HOH HOH . F 3 HOH C 21 1321 37 HOH HOH . F 3 HOH C 22 1322 42 HOH HOH . F 3 HOH C 23 1323 43 HOH HOH . F 3 HOH C 24 1324 46 HOH HOH . F 3 HOH C 25 1325 47 HOH HOH . F 3 HOH C 26 1326 56 HOH HOH . F 3 HOH C 27 1327 58 HOH HOH . F 3 HOH C 28 1328 61 HOH HOH . F 3 HOH C 29 1329 63 HOH HOH . F 3 HOH C 30 1330 66 HOH HOH . F 3 HOH C 31 1331 69 HOH HOH . F 3 HOH C 32 1332 70 HOH HOH . F 3 HOH C 33 1333 73 HOH HOH . F 3 HOH C 34 1334 74 HOH HOH . F 3 HOH C 35 1335 75 HOH HOH . F 3 HOH C 36 1336 77 HOH HOH . F 3 HOH C 37 1337 78 HOH HOH . F 3 HOH C 38 1338 80 HOH HOH . F 3 HOH C 39 1339 82 HOH HOH . F 3 HOH C 40 1340 84 HOH HOH . F 3 HOH C 41 1341 86 HOH HOH . F 3 HOH C 42 1342 87 HOH HOH . F 3 HOH C 43 1343 89 HOH HOH . F 3 HOH C 44 1344 90 HOH HOH . F 3 HOH C 45 1345 97 HOH HOH . F 3 HOH C 46 1346 99 HOH HOH . F 3 HOH C 47 1347 101 HOH HOH . F 3 HOH C 48 1348 102 HOH HOH . F 3 HOH C 49 1349 104 HOH HOH . F 3 HOH C 50 1350 107 HOH HOH . F 3 HOH C 51 1351 109 HOH HOH . F 3 HOH C 52 1352 111 HOH HOH . F 3 HOH C 53 1353 112 HOH HOH . F 3 HOH C 54 1354 114 HOH HOH . F 3 HOH C 55 1355 116 HOH HOH . F 3 HOH C 56 1356 117 HOH HOH . F 3 HOH C 57 1357 118 HOH HOH . F 3 HOH C 58 1358 119 HOH HOH . F 3 HOH C 59 1359 121 HOH HOH . F 3 HOH C 60 1360 122 HOH HOH . F 3 HOH C 61 1361 124 HOH HOH . F 3 HOH C 62 1362 128 HOH HOH . F 3 HOH C 63 1363 130 HOH HOH . F 3 HOH C 64 1364 132 HOH HOH . F 3 HOH C 65 1365 134 HOH HOH . F 3 HOH C 66 1366 136 HOH HOH . F 3 HOH C 67 1367 137 HOH HOH . F 3 HOH C 68 1368 139 HOH HOH . F 3 HOH C 69 1369 141 HOH HOH . F 3 HOH C 70 1370 144 HOH HOH . F 3 HOH C 71 1371 145 HOH HOH . F 3 HOH C 72 1372 146 HOH HOH . F 3 HOH C 73 1373 148 HOH HOH . F 3 HOH C 74 1374 152 HOH HOH . F 3 HOH C 75 1375 153 HOH HOH . F 3 HOH C 76 1376 154 HOH HOH . F 3 HOH C 77 1377 156 HOH HOH . F 3 HOH C 78 1378 159 HOH HOH . F 3 HOH C 79 1379 166 HOH HOH . F 3 HOH C 80 1380 170 HOH HOH . F 3 HOH C 81 1381 176 HOH HOH . F 3 HOH C 82 1382 182 HOH HOH . F 3 HOH C 83 1383 183 HOH HOH . F 3 HOH C 84 1384 184 HOH HOH . F 3 HOH C 85 1385 185 HOH HOH . F 3 HOH C 86 1386 186 HOH HOH . F 3 HOH C 87 1387 189 HOH HOH . F 3 HOH C 88 1388 192 HOH HOH . F 3 HOH C 89 1389 196 HOH HOH . F 3 HOH C 90 1390 197 HOH HOH . F 3 HOH C 91 1391 201 HOH HOH . F 3 HOH C 92 1392 202 HOH HOH . F 3 HOH C 93 1393 204 HOH HOH . F 3 HOH C 94 1394 205 HOH HOH . F 3 HOH C 95 1395 212 HOH HOH . F 3 HOH C 96 1396 213 HOH HOH . F 3 HOH C 97 1397 214 HOH HOH . F 3 HOH C 98 1398 215 HOH HOH . F 3 HOH C 99 1399 216 HOH HOH . F 3 HOH C 100 1400 218 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 37Q . . . C 2 -20.143 -7.594 13.267 1 27.83 ? C4 37Q 1201 A 1 HETATM 2 C C5 37Q . . . C 2 -19.182 -8.444 10.802 1 32.97 ? C5 37Q 1201 A 1 HETATM 3 C C6 37Q . . . C 2 -19.834 -6.687 12.277 1 30.16 ? C6 37Q 1201 A 1 HETATM 4 C C7 37Q . . . C 2 -17.13 -3.065 16.279 1 20.75 ? C7 37Q 1201 A 1 HETATM 5 C C8 37Q . . . C 2 -17.481 -1.79 15.893 1 20.94 ? C8 37Q 1201 A 1 HETATM 6 C C10 37Q . . . C 2 -18.892 -4.069 8.983 1 32.17 ? C10 37Q 1201 A 1 HETATM 7 C C13 37Q . . . C 2 -16.512 -7.377 16.977 1 34.36 ? C13 37Q 1201 A 1 HETATM 8 C C15 37Q . . . C 2 -17.145 -4.125 15.397 1 22.35 ? C15 37Q 1201 A 1 HETATM 9 C C17 37Q . . . C 2 -17.828 -2.706 13.696 1 19.9 ? C17 37Q 1201 A 1 HETATM 10 C C20 37Q . . . C 2 -16.488 -5.881 16.974 1 35.93 ? C20 37Q 1201 A 1 HETATM 11 C C1 37Q . . . C 2 -17.444 -7.779 18.083 1 28 ? C1 37Q 1201 A 1 HETATM 12 C C2 37Q . . . C 2 -19.965 -8.936 13.005 1 30.74 ? C2 37Q 1201 A 1 HETATM 13 C C3 37Q . . . C 2 -19.497 -9.369 11.78 1 32.3 ? C3 37Q 1201 A 1 HETATM 14 C C9 37Q . . . C 2 -17.499 -3.984 14.079 1 19.53 ? C9 37Q 1201 A 1 HETATM 15 C C11 37Q . . . C 2 -18.519 -2.167 10.124 1 29.51 ? C11 37Q 1201 A 1 HETATM 16 C C12 37Q . . . C 2 -18.463 -0.872 12.678 1 24.05 ? C12 37Q 1201 A 1 HETATM 17 C C14 37Q . . . C 2 -19.339 -7.094 11.047 1 30.87 ? C14 37Q 1201 A 1 HETATM 18 C C16 37Q . . . C 2 -17.833 -1.635 14.562 1 20.97 ? C16 37Q 1201 A 1 HETATM 19 C C18 37Q . . . C 2 -18.842 -4.811 10.146 1 26.94 ? C18 37Q 1201 A 1 HETATM 20 C C19 37Q . . . C 2 -18.475 -2.895 11.3 1 26.53 ? C19 37Q 1201 A 1 HETATM 21 N N21 37Q . . . C 2 -18.738 -2.74 8.938 1 33.87 ? N21 37Q 1201 A 1 HETATM 22 N N22 37Q . . . C 2 -18.222 -0.499 13.912 1 23.16 ? N22 37Q 1201 A 1 HETATM 23 N N23 37Q . . . C 2 -18.619 -4.223 11.328 1 23.62 ? N23 37Q 1201 A 1 HETATM 24 N N24 37Q . . . C 2 -19.014 -6.195 10.012 1 26.51 ? N24 37Q 1201 A 1 HETATM 25 N N25 37Q . . . C 2 -16.825 -5.44 15.739 1 29.2 ? N25 37Q 1201 A 1 HETATM 26 N N26 37Q . . . C 2 -18.236 -2.202 12.493 1 23.41 ? N26 37Q 1201 A 1 HETATM 27 O O27 37Q . . . C 2 -16.198 -5.202 17.949 1 43.39 ? O27 37Q 1201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 27 #