data_4QQ7 # _model_server_result.job_id ws0wgz1jjhT3m5YUhgIO_A _model_server_result.datetime_utc '2024-12-01 05:09:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qq7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 4QQ7 # _exptl.entry_id 4QQ7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QQ7 _cell.length_a 58.7 _cell.length_b 95.2 _cell.length_c 110.7 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QQ7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 152 n n N1 HN11 GSH sing 153 n n N1 HN12 GSH sing 154 n n CA1 C1 GSH sing 155 n n CA1 CB1 GSH sing 156 n n CA1 HA1 GSH sing 157 n n C1 O11 GSH doub 158 n n C1 O12 GSH sing 159 n n O12 H12 GSH sing 160 n n CB1 CG1 GSH sing 161 n n CB1 HB12 GSH sing 162 n n CB1 HB13 GSH sing 163 n n CG1 CD1 GSH sing 164 n n CG1 HG12 GSH sing 165 n n CG1 HG13 GSH sing 166 n n CD1 OE1 GSH doub 167 n n CD1 N2 GSH sing 168 n n N2 CA2 GSH sing 169 n n N2 HN2 GSH sing 170 n n CA2 C2 GSH sing 171 n n CA2 CB2 GSH sing 172 n n CA2 HA2 GSH sing 173 n n C2 O2 GSH doub 174 n n C2 N3 GSH sing 175 n n CB2 SG2 GSH sing 176 n n CB2 HB22 GSH sing 177 n n CB2 HB23 GSH sing 178 n n SG2 HSG GSH sing 179 n n N3 CA3 GSH sing 180 n n N3 HN3 GSH sing 181 n n CA3 C3 GSH sing 182 n n CA3 HA31 GSH sing 183 n n CA3 HA32 GSH sing 184 n n C3 O31 GSH doub 185 n n C3 O32 GSH sing 186 n n O32 H32 GSH sing 187 n n # _atom_sites.entry_id 4QQ7 _atom_sites.fract_transf_matrix[1][1] 0.017036 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010504 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009033 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GSH A 1 301 300 GSH GSH . D 3 GLO A 1 302 1 GLO GLO . E 2 GSH B 1 301 300 GSH GSH . F 3 GLO B 1 302 2 GLO GLO . G 4 HOH A 1 401 1 HOH HOH . G 4 HOH A 2 402 3 HOH HOH . G 4 HOH A 3 403 4 HOH HOH . G 4 HOH A 4 404 5 HOH HOH . G 4 HOH A 5 405 6 HOH HOH . G 4 HOH A 6 406 7 HOH HOH . G 4 HOH A 7 407 9 HOH HOH . G 4 HOH A 8 408 10 HOH HOH . G 4 HOH A 9 409 12 HOH HOH . G 4 HOH A 10 410 16 HOH HOH . G 4 HOH A 11 411 18 HOH HOH . G 4 HOH A 12 412 19 HOH HOH . G 4 HOH A 13 413 20 HOH HOH . G 4 HOH A 14 414 21 HOH HOH . G 4 HOH A 15 415 22 HOH HOH . G 4 HOH A 16 416 23 HOH HOH . G 4 HOH A 17 417 29 HOH HOH . G 4 HOH A 18 418 31 HOH HOH . G 4 HOH A 19 419 32 HOH HOH . G 4 HOH A 20 420 33 HOH HOH . G 4 HOH A 21 421 35 HOH HOH . G 4 HOH A 22 422 36 HOH HOH . G 4 HOH A 23 423 37 HOH HOH . G 4 HOH A 24 424 38 HOH HOH . G 4 HOH A 25 425 39 HOH HOH . G 4 HOH A 26 426 40 HOH HOH . G 4 HOH A 27 427 41 HOH HOH . G 4 HOH A 28 428 42 HOH HOH . G 4 HOH A 29 429 43 HOH HOH . G 4 HOH A 30 430 44 HOH HOH . G 4 HOH A 31 431 46 HOH HOH . G 4 HOH A 32 432 47 HOH HOH . G 4 HOH A 33 433 48 HOH HOH . G 4 HOH A 34 434 49 HOH HOH . G 4 HOH A 35 435 50 HOH HOH . G 4 HOH A 36 436 51 HOH HOH . G 4 HOH A 37 437 52 HOH HOH . G 4 HOH A 38 438 54 HOH HOH . G 4 HOH A 39 439 55 HOH HOH . G 4 HOH A 40 440 57 HOH HOH . G 4 HOH A 41 441 58 HOH HOH . G 4 HOH A 42 442 59 HOH HOH . G 4 HOH A 43 443 60 HOH HOH . G 4 HOH A 44 444 61 HOH HOH . G 4 HOH A 45 445 62 HOH HOH . G 4 HOH A 46 446 65 HOH HOH . G 4 HOH A 47 447 66 HOH HOH . G 4 HOH A 48 448 68 HOH HOH . G 4 HOH A 49 449 69 HOH HOH . G 4 HOH A 50 450 70 HOH HOH . G 4 HOH A 51 451 71 HOH HOH . G 4 HOH A 52 452 75 HOH HOH . G 4 HOH A 53 453 76 HOH HOH . G 4 HOH A 54 454 77 HOH HOH . G 4 HOH A 55 455 78 HOH HOH . G 4 HOH A 56 456 79 HOH HOH . G 4 HOH A 57 457 80 HOH HOH . G 4 HOH A 58 458 81 HOH HOH . G 4 HOH A 59 459 82 HOH HOH . G 4 HOH A 60 460 84 HOH HOH . G 4 HOH A 61 461 85 HOH HOH . G 4 HOH A 62 462 86 HOH HOH . G 4 HOH A 63 463 90 HOH HOH . G 4 HOH A 64 464 91 HOH HOH . G 4 HOH A 65 465 92 HOH HOH . G 4 HOH A 66 466 94 HOH HOH . G 4 HOH A 67 467 99 HOH HOH . G 4 HOH A 68 468 101 HOH HOH . G 4 HOH A 69 469 105 HOH HOH . G 4 HOH A 70 470 106 HOH HOH . G 4 HOH A 71 471 107 HOH HOH . G 4 HOH A 72 472 109 HOH HOH . G 4 HOH A 73 473 110 HOH HOH . G 4 HOH A 74 474 111 HOH HOH . G 4 HOH A 75 475 115 HOH HOH . G 4 HOH A 76 476 116 HOH HOH . G 4 HOH A 77 477 117 HOH HOH . G 4 HOH A 78 478 118 HOH HOH . G 4 HOH A 79 479 119 HOH HOH . G 4 HOH A 80 480 120 HOH HOH . G 4 HOH A 81 481 124 HOH HOH . G 4 HOH A 82 482 125 HOH HOH . G 4 HOH A 83 483 126 HOH HOH . G 4 HOH A 84 484 127 HOH HOH . G 4 HOH A 85 485 128 HOH HOH . G 4 HOH A 86 486 129 HOH HOH . G 4 HOH A 87 487 130 HOH HOH . H 4 HOH B 1 401 2 HOH HOH . H 4 HOH B 2 402 8 HOH HOH . H 4 HOH B 3 403 11 HOH HOH . H 4 HOH B 4 404 13 HOH HOH . H 4 HOH B 5 405 15 HOH HOH . H 4 HOH B 6 406 17 HOH HOH . H 4 HOH B 7 407 24 HOH HOH . H 4 HOH B 8 408 25 HOH HOH . H 4 HOH B 9 409 26 HOH HOH . H 4 HOH B 10 410 27 HOH HOH . H 4 HOH B 11 411 28 HOH HOH . H 4 HOH B 12 412 34 HOH HOH . H 4 HOH B 13 413 53 HOH HOH . H 4 HOH B 14 414 56 HOH HOH . H 4 HOH B 15 415 63 HOH HOH . H 4 HOH B 16 416 64 HOH HOH . H 4 HOH B 17 417 67 HOH HOH . H 4 HOH B 18 418 72 HOH HOH . H 4 HOH B 19 419 73 HOH HOH . H 4 HOH B 20 420 87 HOH HOH . H 4 HOH B 21 421 88 HOH HOH . H 4 HOH B 22 422 96 HOH HOH . H 4 HOH B 23 423 104 HOH HOH . H 4 HOH B 24 424 113 HOH HOH . H 4 HOH B 25 425 121 HOH HOH . H 4 HOH B 26 426 122 HOH HOH . H 4 HOH B 27 427 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . C 2 34.127 62.79 19.325 0.84 25.85 ? N1 GSH 301 A 1 HETATM 2 C CA1 GSH . . . C 2 32.82 63.218 19.745 0.84 34.6 ? CA1 GSH 301 A 1 HETATM 3 C C1 GSH . . . C 2 31.882 63.196 18.578 0.84 33.21 ? C1 GSH 301 A 1 HETATM 4 O O11 GSH . . . C 2 32.318 63.23 17.388 0.84 34.33 ? O11 GSH 301 A 1 HETATM 5 O O12 GSH . . . C 2 30.64 63.094 18.774 0.84 32.51 ? O12 GSH 301 A 1 HETATM 6 C CB1 GSH . . . C 2 32.934 64.596 20.44 0.84 36.5 ? CB1 GSH 301 A 1 HETATM 7 C CG1 GSH . . . C 2 31.53 65.1 20.919 0.84 38.44 ? CG1 GSH 301 A 1 HETATM 8 C CD1 GSH . . . C 2 31.707 66.303 21.848 0.84 40.94 ? CD1 GSH 301 A 1 HETATM 9 O OE1 GSH . . . C 2 32.811 66.652 22.217 0.84 41.61 ? OE1 GSH 301 A 1 HETATM 10 N N2 GSH . . . C 2 30.535 67.036 22.285 0.84 38.35 ? N2 GSH 301 A 1 HETATM 11 C CA2 GSH . . . C 2 30.651 68.176 23.193 0.84 41.06 ? CA2 GSH 301 A 1 HETATM 12 C C2 GSH . . . C 2 30.017 67.786 24.522 0.84 47.53 ? C2 GSH 301 A 1 HETATM 13 O O2 GSH . . . C 2 28.987 67.143 24.529 0.84 35.58 ? O2 GSH 301 A 1 HETATM 14 C CB2 GSH . . . C 2 29.89 69.342 22.684 0.84 32.08 ? CB2 GSH 301 A 1 HETATM 15 S SG2 GSH . . . C 2 30.816 70.105 21.373 0.84 37.5 ? SG2 GSH 301 A 1 HETATM 16 N N3 GSH . . . C 2 30.623 68.189 25.78 0.84 55.78 ? N3 GSH 301 A 1 HETATM 17 C CA3 GSH . . . C 2 29.925 67.762 26.992 0.84 65.83 ? CA3 GSH 301 A 1 HETATM 18 C C3 GSH . . . C 2 30.263 68.637 28.182 0.84 71.19 ? C3 GSH 301 A 1 HETATM 19 O O31 GSH . . . C 2 31.464 68.793 28.539 0.84 79.7 ? O31 GSH 301 A 1 HETATM 20 O O32 GSH . . . C 2 29.327 69.192 28.811 0.84 68.02 ? O32 GSH 301 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 20 #