data_4QQQ # _model_server_result.job_id c77lKwrohwClgiDjCem_xA _model_server_result.datetime_utc '2024-10-19 22:24:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qqq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 4QQQ # _exptl.entry_id 4QQQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-D-mannopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QQQ _cell.length_a 24.679 _cell.length_b 157.454 _cell.length_c 211.325 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QQQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id MAN _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-mannopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-mannose;D-mannose;mannose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MAN sing 218 n n C1 O1 MAN sing 219 n n C1 O5 MAN sing 220 n n C1 H1 MAN sing 221 n n C2 C3 MAN sing 222 n n C2 O2 MAN sing 223 n n C2 H2 MAN sing 224 n n C3 C4 MAN sing 225 n n C3 O3 MAN sing 226 n n C3 H3 MAN sing 227 n n C4 C5 MAN sing 228 n n C4 O4 MAN sing 229 n n C4 H4 MAN sing 230 n n C5 C6 MAN sing 231 n n C5 O5 MAN sing 232 n n C5 H5 MAN sing 233 n n C6 O6 MAN sing 234 n n C6 H61 MAN sing 235 n n C6 H62 MAN sing 236 n n O1 HO1 MAN sing 237 n n O2 HO2 MAN sing 238 n n O3 HO3 MAN sing 239 n n O4 HO4 MAN sing 240 n n O6 HO6 MAN sing 241 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version MAN DManpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 MAN a-D-mannopyranose 'COMMON NAME' GMML 1 MAN a-D-Manp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 MAN Man 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 4QQQ _atom_sites.fract_transf_matrix[1][1] 0.04052 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006351 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004732 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MAN A 1 501 1 MAN MAN . C 2 MAN A 1 502 2 MAN MAN . D 3 HOH A 1 601 1 HOH HOH . D 3 HOH A 2 602 2 HOH HOH . D 3 HOH A 3 603 3 HOH HOH . D 3 HOH A 4 604 4 HOH HOH . D 3 HOH A 5 605 5 HOH HOH . D 3 HOH A 6 606 6 HOH HOH . D 3 HOH A 7 607 7 HOH HOH . D 3 HOH A 8 608 9 HOH HOH . D 3 HOH A 9 609 10 HOH HOH . D 3 HOH A 10 610 11 HOH HOH . D 3 HOH A 11 611 12 HOH HOH . D 3 HOH A 12 612 13 HOH HOH . D 3 HOH A 13 613 14 HOH HOH . D 3 HOH A 14 614 15 HOH HOH . D 3 HOH A 15 615 16 HOH HOH . D 3 HOH A 16 616 17 HOH HOH . D 3 HOH A 17 617 18 HOH HOH . D 3 HOH A 18 618 19 HOH HOH . D 3 HOH A 19 619 20 HOH HOH . D 3 HOH A 20 620 21 HOH HOH . D 3 HOH A 21 621 22 HOH HOH . D 3 HOH A 22 622 23 HOH HOH . D 3 HOH A 23 623 24 HOH HOH . D 3 HOH A 24 624 25 HOH HOH . D 3 HOH A 25 625 26 HOH HOH . D 3 HOH A 26 626 27 HOH HOH . D 3 HOH A 27 627 28 HOH HOH . D 3 HOH A 28 628 29 HOH HOH . D 3 HOH A 29 629 30 HOH HOH . D 3 HOH A 30 630 31 HOH HOH . D 3 HOH A 31 631 32 HOH HOH . D 3 HOH A 32 632 33 HOH HOH . D 3 HOH A 33 633 34 HOH HOH . D 3 HOH A 34 634 35 HOH HOH . D 3 HOH A 35 635 36 HOH HOH . D 3 HOH A 36 636 37 HOH HOH . D 3 HOH A 37 637 38 HOH HOH . D 3 HOH A 38 638 39 HOH HOH . D 3 HOH A 39 639 40 HOH HOH . D 3 HOH A 40 640 41 HOH HOH . D 3 HOH A 41 641 42 HOH HOH . D 3 HOH A 42 642 43 HOH HOH . D 3 HOH A 43 643 44 HOH HOH . D 3 HOH A 44 644 45 HOH HOH . D 3 HOH A 45 645 46 HOH HOH . D 3 HOH A 46 646 47 HOH HOH . D 3 HOH A 47 647 48 HOH HOH . D 3 HOH A 48 648 49 HOH HOH . D 3 HOH A 49 649 50 HOH HOH . D 3 HOH A 50 650 51 HOH HOH . D 3 HOH A 51 651 52 HOH HOH . D 3 HOH A 52 652 53 HOH HOH . D 3 HOH A 53 653 54 HOH HOH . D 3 HOH A 54 654 55 HOH HOH . D 3 HOH A 55 655 56 HOH HOH . D 3 HOH A 56 656 57 HOH HOH . D 3 HOH A 57 657 58 HOH HOH . D 3 HOH A 58 658 59 HOH HOH . D 3 HOH A 59 659 60 HOH HOH . D 3 HOH A 60 660 61 HOH HOH . D 3 HOH A 61 661 62 HOH HOH . D 3 HOH A 62 662 63 HOH HOH . D 3 HOH A 63 663 64 HOH HOH . D 3 HOH A 64 664 65 HOH HOH . D 3 HOH A 65 665 66 HOH HOH . D 3 HOH A 66 666 67 HOH HOH . D 3 HOH A 67 667 68 HOH HOH . D 3 HOH A 68 668 69 HOH HOH . D 3 HOH A 69 669 70 HOH HOH . D 3 HOH A 70 670 71 HOH HOH . D 3 HOH A 71 671 72 HOH HOH . D 3 HOH A 72 672 73 HOH HOH . D 3 HOH A 73 673 74 HOH HOH . D 3 HOH A 74 674 75 HOH HOH . D 3 HOH A 75 675 76 HOH HOH . D 3 HOH A 76 676 77 HOH HOH . D 3 HOH A 77 677 78 HOH HOH . D 3 HOH A 78 678 79 HOH HOH . D 3 HOH A 79 679 81 HOH HOH . D 3 HOH A 80 680 82 HOH HOH . D 3 HOH A 81 681 83 HOH HOH . D 3 HOH A 82 682 84 HOH HOH . D 3 HOH A 83 683 85 HOH HOH . D 3 HOH A 84 684 86 HOH HOH . D 3 HOH A 85 685 87 HOH HOH . D 3 HOH A 86 686 88 HOH HOH . D 3 HOH A 87 687 89 HOH HOH . D 3 HOH A 88 688 90 HOH HOH . D 3 HOH A 89 689 91 HOH HOH . D 3 HOH A 90 690 92 HOH HOH . D 3 HOH A 91 691 94 HOH HOH . D 3 HOH A 92 692 95 HOH HOH . D 3 HOH A 93 693 96 HOH HOH . D 3 HOH A 94 694 98 HOH HOH . D 3 HOH A 95 695 99 HOH HOH . D 3 HOH A 96 696 100 HOH HOH . D 3 HOH A 97 697 101 HOH HOH . D 3 HOH A 98 698 102 HOH HOH . D 3 HOH A 99 699 107 HOH HOH . D 3 HOH A 100 700 108 HOH HOH . D 3 HOH A 101 701 109 HOH HOH . D 3 HOH A 102 702 112 HOH HOH . D 3 HOH A 103 703 113 HOH HOH . D 3 HOH A 104 704 114 HOH HOH . D 3 HOH A 105 705 115 HOH HOH . D 3 HOH A 106 706 117 HOH HOH . D 3 HOH A 107 707 118 HOH HOH . D 3 HOH A 108 708 119 HOH HOH . D 3 HOH A 109 709 120 HOH HOH . D 3 HOH A 110 710 121 HOH HOH . D 3 HOH A 111 711 122 HOH HOH . D 3 HOH A 112 712 124 HOH HOH . D 3 HOH A 113 713 127 HOH HOH . D 3 HOH A 114 714 130 HOH HOH . D 3 HOH A 115 715 131 HOH HOH . D 3 HOH A 116 716 133 HOH HOH . D 3 HOH A 117 717 134 HOH HOH . D 3 HOH A 118 718 135 HOH HOH . D 3 HOH A 119 719 138 HOH HOH . D 3 HOH A 120 720 139 HOH HOH . D 3 HOH A 121 721 140 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MAN . . . B 2 -5.381 44.924 5.758 1 31.53 ? C1 MAN 501 A 1 HETATM 2 C C2 MAN . . . B 2 -6.024 46.254 5.571 1 31.1 ? C2 MAN 501 A 1 HETATM 3 C C3 MAN . . . B 2 -5.309 47.143 6.598 1 20.27 ? C3 MAN 501 A 1 HETATM 4 C C4 MAN . . . B 2 -5.393 46.663 7.995 1 20.98 ? C4 MAN 501 A 1 HETATM 5 C C5 MAN . . . B 2 -4.944 45.225 7.996 1 31.46 ? C5 MAN 501 A 1 HETATM 6 C C6 MAN . . . B 2 -5.139 44.581 9.362 1 33.57 ? C6 MAN 501 A 1 HETATM 7 O O1 MAN . . . B 2 -3.996 45.171 5.684 1 38.15 ? O1 MAN 501 A 1 HETATM 8 O O2 MAN . . . B 2 -7.441 46.131 5.649 1 34.38 ? O2 MAN 501 A 1 HETATM 9 O O3 MAN . . . B 2 -5.715 48.492 6.555 1 41.54 ? O3 MAN 501 A 1 HETATM 10 O O4 MAN . . . B 2 -4.528 47.469 8.755 1 31.2 ? O4 MAN 501 A 1 HETATM 11 O O5 MAN . . . B 2 -5.699 44.487 7.051 1 39.76 ? O5 MAN 501 A 1 HETATM 12 O O6 MAN . . . B 2 -3.979 44.75 10.144 1 29 ? O6 MAN 501 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #