data_4QQU # _model_server_result.job_id 9GWtXtSamUpTYVOvSF2AFQ _model_server_result.datetime_utc '2024-10-20 21:02:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 4qqu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 4QQU # _exptl.entry_id 4QQU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 135.185 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-AMINO-4-MERCAPTO-BUTYRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 4QQU _cell.length_a 74.978 _cell.length_b 99.102 _cell.length_c 103.902 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4QQU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 679 A HIS 657 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc2 A SG CYS 681 A CYS 659 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc3 A SG CYS 761 A CYS 739 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc4 B SD HCS . A HCS 801 1_555 C ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? # _chem_comp.formula 'C4 H9 N O2 S' _chem_comp.formula_weight 135.185 _chem_comp.id HCS _chem_comp.mon_nstd_flag . _chem_comp.name '2-AMINO-4-MERCAPTO-BUTYRIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms L-Homocysteine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA HCS sing 218 n n N H HCS sing 219 n n N H2 HCS sing 220 n n CA CB HCS sing 221 n n CA C HCS sing 222 n n CA HA HCS sing 223 n n CB CG HCS sing 224 n n CB HB2 HCS sing 225 n n CB HB3 HCS sing 226 n n CG SD HCS sing 227 n n CG HG2 HCS sing 228 n n CG HG3 HCS sing 229 n n SD HD HCS sing 230 n n C OXT HCS sing 231 n n C O HCS doub 232 n n OXT HXT HCS sing 233 n n # _atom_sites.entry_id 4QQU _atom_sites.fract_transf_matrix[1][1] 0.013337 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010091 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009624 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HCS A 1 801 1 HCS HCS . C 3 ZN A 1 802 1 ZN ZN . D 4 PO4 A 1 803 1 PO4 PO4 . E 4 PO4 A 1 804 2 PO4 PO4 . F 5 39S A 1 805 1 39S 39S . G 6 HOH A 1 901 1 HOH HOH . G 6 HOH A 2 902 2 HOH HOH . G 6 HOH A 3 903 3 HOH HOH . G 6 HOH A 4 904 4 HOH HOH . G 6 HOH A 5 905 5 HOH HOH . G 6 HOH A 6 906 6 HOH HOH . G 6 HOH A 7 907 7 HOH HOH . G 6 HOH A 8 908 8 HOH HOH . G 6 HOH A 9 909 9 HOH HOH . G 6 HOH A 10 910 10 HOH HOH . G 6 HOH A 11 911 11 HOH HOH . G 6 HOH A 12 912 12 HOH HOH . G 6 HOH A 13 913 13 HOH HOH . G 6 HOH A 14 914 14 HOH HOH . G 6 HOH A 15 915 15 HOH HOH . G 6 HOH A 16 916 16 HOH HOH . G 6 HOH A 17 917 17 HOH HOH . G 6 HOH A 18 918 18 HOH HOH . G 6 HOH A 19 919 19 HOH HOH . G 6 HOH A 20 920 20 HOH HOH . G 6 HOH A 21 921 21 HOH HOH . G 6 HOH A 22 922 22 HOH HOH . G 6 HOH A 23 923 23 HOH HOH . G 6 HOH A 24 924 24 HOH HOH . G 6 HOH A 25 925 25 HOH HOH . G 6 HOH A 26 926 29 HOH HOH . G 6 HOH A 27 927 30 HOH HOH . G 6 HOH A 28 928 32 HOH HOH . G 6 HOH A 29 929 33 HOH HOH . G 6 HOH A 30 930 34 HOH HOH . G 6 HOH A 31 931 35 HOH HOH . G 6 HOH A 32 932 37 HOH HOH . G 6 HOH A 33 933 38 HOH HOH . G 6 HOH A 34 934 39 HOH HOH . G 6 HOH A 35 935 40 HOH HOH . G 6 HOH A 36 936 41 HOH HOH . G 6 HOH A 37 937 42 HOH HOH . G 6 HOH A 38 938 43 HOH HOH . G 6 HOH A 39 939 44 HOH HOH . G 6 HOH A 40 940 52 HOH HOH . G 6 HOH A 41 941 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N HCS . . . B 2 29.888 -39.4 -24.751 1 29.71 ? N HCS 801 A 1 HETATM 2 C CA HCS . . . B 2 28.736 -38.866 -25.482 1 30.32 ? CA HCS 801 A 1 HETATM 3 C CB HCS . . . B 2 28.91 -37.365 -25.691 1 30.69 ? CB HCS 801 A 1 HETATM 4 C CG HCS . . . B 2 27.688 -36.729 -26.339 1 31.42 ? CG HCS 801 A 1 HETATM 5 S SD HCS . . . B 2 27.76 -34.949 -26.022 1 33.22 ? SD HCS 801 A 1 HETATM 6 C C HCS . . . B 2 28.664 -39.609 -26.779 1 30.08 ? C HCS 801 A 1 HETATM 7 O OXT HCS . . . B 2 29.836 -39.988 -27.286 1 27.75 ? OXT HCS 801 A 1 HETATM 8 O O HCS . . . B 2 27.578 -39.878 -27.318 1 30.16 ? O HCS 801 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 8 #